Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
18260611
plasma membrane: 27800704 plasma membrane: 28056797 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os04t0421900-01 | plasma membrane |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10380.1 | Os04t0421900-01 | AT1G76850.1 | 24307681 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G061610.1 | Barley | cytosol | 11.63 | 95.35 |
| HORVU7Hr1G061640.1 | Barley | cytosol | 22.5 | 90.15 |
| EER99853 | Sorghum | cytosol | 89.6 | 90.11 |
| HORVU7Hr1G061620.1 | Barley | plasma membrane | 23.54 | 89.25 |
| TraesCS7A01G284500.1 | Wheat | cytosol | 88.75 | 89.17 |
| Zm00001d022502_P003 | Maize | cytosol | 88.94 | 88.03 |
| TraesCS7D01G282100.6 | Wheat | plastid | 34.97 | 87.47 |
| TraesCS7B01G181500.1 | Wheat | cytosol | 30.25 | 85.56 |
| GSMUA_Achr3P23130_001 | Banana | cytosol | 16.54 | 77.09 |
| VIT_13s0019g04810.t01 | Wine grape | cytosol | 6.14 | 75.58 |
| KRH34813 | Soybean | cytosol | 63.61 | 63.13 |
| KRG91961 | Soybean | endoplasmic reticulum | 63.42 | 63.0 |
| GSMUA_Achr3P23140_001 | Banana | cytosol | 49.43 | 62.34 |
| AT3G10380.1 | Thale cress | cytosol | 61.06 | 61.35 |
| CDY08608 | Canola | nucleus | 60.4 | 60.57 |
| CDY00928 | Canola | cytosol | 60.4 | 59.72 |
| Solyc11g008340.1.1 | Tomato | nucleus | 64.08 | 59.32 |
| CDX73930 | Canola | cytosol | 59.36 | 59.02 |
| CDY56705 | Canola | cytosol | 60.02 | 58.91 |
| CDY00666 | Canola | cytosol | 58.79 | 58.46 |
| Bra029834.1-P | Field mustard | cytosol | 60.49 | 58.08 |
| CDY41338 | Canola | nucleus | 59.17 | 58.02 |
| Bra001356.1-P | Field mustard | cytosol | 57.75 | 56.94 |
Protein Annotations
| MapMan:22.6.3.5 | EntrezGene:4345249 | ProteinID:BAD31511.1 | ProteinID:BAF23435.1 | ProteinID:BAT04863.1 | GO:GO:0000145 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006612 | GO:GO:0006810 |
| GO:GO:0006887 | GO:GO:0006893 | GO:GO:0006903 | GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0015031 | EnsemblPlantsGene:Os08g0318500 | EnsemblPlants:Os08t0318500-01 | PFAM:PF04048 | PANTHER:PTHR14146 | UniProt:Q69PQ1 |
| InterPro:Sec8_exocyst | UniParc:UPI00003FE893 | RefSeq:XP_015649906.1 | SEG:seg | : | : |
Description
Cen8.t01153Sec8 exocyst complex component specific domain containing protein. (Os08t0318500-01)
Coordinates
chr8:-:13740485..13765521
Molecular Weight (calculated)
117404.0 Da
IEP (calculated)
5.503
GRAVY (calculated)
-0.238
Length
1058 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSRTGGRRRI FDGLPIPADK SYLKEGLSRI DEGWAAARFD SLPHVVHILT SKDREGEIQF LKEQSDLIED VVDEVVHAYH HGFNKAIQNY SQILRLFSES
0101: AESITGLKGE MAEAKKLLGR KNKHLGQLWY RSLTLRHVLS LLDQVEDVAK VPARIENLMA EKQLYAAVQL HVQSMLMLER EGLQAVGALQ DVRSDLAKLR
0201: GVLFYKILEE LHSHLYNNGE YSSVTLSMVD NEELPTSTAT GRLVNSMQPL SRRTRSIKGD NHFGASADGI PKTSSVGGSS FDGPDDDSSI DMHESDGGRS
0301: RRDSKSISRE VPIFLSCATP DEFLESVTKA DASLSVKYLR TLVQCLSMLG KVAAAGAVIC QRVRPTIHDV ITSKIRAYSE ETSKSNVNKA ANENSDVSHS
0401: NGRAARYQLL KQKTKNGASL MASQLVVSPI SPAMAPTGDA QCAASQLLSA IFECLVDILE NHITVGELLE QKSSTEVDNA NTPHMANGDA SWNPDSESSQ
0501: ATGGFTVAFS LSVVQSECQQ LLCEILRATP EAATADAAVQ TARLANKDPV KEKRDGSEGL SFAFRITDAA ITAPNEGQGW RRNSTVPQEG YGTASVIPDQ
0601: GIFLAASVYR PVFEFMNKIG LMLPQKYWQL GNDGLLAFVN NFLKEHFLPA IFVDYRKCVQ QAISSPAAFR PRVHATSVYS PLVENGRPVL QGLLAVDIIA
0701: KEVLGWVQLM PNYATELVEY VRTFLERTHE RCRASYMEAV LEKQSYILLS RNDVESLMRL DPANLSLQNS FGQLDHSIPD AEAVEVEIEL SDLLLDMCPI
0801: KQENLIHDDQ KLILLASLSD SLEYLADSVE RLGESFINSS TMLENKNHIH QGRHTRSTSA IPKSLASLAN EYRRLAIDCV RVLRLEMQLE TIYHMQEMTK
0901: REYVEDQDAE DPDDFIISLT TQIARRDEEM APYIAESKRN YVFGGISSVA ANASIKALAQ MKSINLLGVQ QICRNSIALE QALAAIPSID SEAVQQRIDR
1001: VRTFYELLNL PFESLLGFIA EHEYLFSAKE YLSVLKVNVP GREMPMDAER RISQILGH
0101: AESITGLKGE MAEAKKLLGR KNKHLGQLWY RSLTLRHVLS LLDQVEDVAK VPARIENLMA EKQLYAAVQL HVQSMLMLER EGLQAVGALQ DVRSDLAKLR
0201: GVLFYKILEE LHSHLYNNGE YSSVTLSMVD NEELPTSTAT GRLVNSMQPL SRRTRSIKGD NHFGASADGI PKTSSVGGSS FDGPDDDSSI DMHESDGGRS
0301: RRDSKSISRE VPIFLSCATP DEFLESVTKA DASLSVKYLR TLVQCLSMLG KVAAAGAVIC QRVRPTIHDV ITSKIRAYSE ETSKSNVNKA ANENSDVSHS
0401: NGRAARYQLL KQKTKNGASL MASQLVVSPI SPAMAPTGDA QCAASQLLSA IFECLVDILE NHITVGELLE QKSSTEVDNA NTPHMANGDA SWNPDSESSQ
0501: ATGGFTVAFS LSVVQSECQQ LLCEILRATP EAATADAAVQ TARLANKDPV KEKRDGSEGL SFAFRITDAA ITAPNEGQGW RRNSTVPQEG YGTASVIPDQ
0601: GIFLAASVYR PVFEFMNKIG LMLPQKYWQL GNDGLLAFVN NFLKEHFLPA IFVDYRKCVQ QAISSPAAFR PRVHATSVYS PLVENGRPVL QGLLAVDIIA
0701: KEVLGWVQLM PNYATELVEY VRTFLERTHE RCRASYMEAV LEKQSYILLS RNDVESLMRL DPANLSLQNS FGQLDHSIPD AEAVEVEIEL SDLLLDMCPI
0801: KQENLIHDDQ KLILLASLSD SLEYLADSVE RLGESFINSS TMLENKNHIH QGRHTRSTSA IPKSLASLAN EYRRLAIDCV RVLRLEMQLE TIYHMQEMTK
0901: REYVEDQDAE DPDDFIISLT TQIARRDEEM APYIAESKRN YVFGGISSVA ANASIKALAQ MKSINLLGVQ QICRNSIALE QALAAIPSID SEAVQQRIDR
1001: VRTFYELLNL PFESLLGFIA EHEYLFSAKE YLSVLKVNVP GREMPMDAER RISQILGH
0001: MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
Arabidopsis Description
SEC8SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.