Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10380.1 | CDX68084 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDX85974 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDY13565 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDY45948 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDY45950 | AT1G76850.1 | 24307681 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56705 | Canola | cytosol | 97.96 | 98.05 |
| CDY08608 | Canola | nucleus | 91.01 | 93.08 |
| AT3G10380.1 | Thale cress | cytosol | 90.27 | 92.5 |
| CDY00928 | Canola | cytosol | 91.29 | 92.06 |
| CDX73930 | Canola | cytosol | 89.06 | 90.32 |
| CDY00666 | Canola | cytosol | 88.69 | 89.94 |
| KRH34813 | Soybean | cytosol | 71.27 | 72.14 |
| KRG91961 | Soybean | endoplasmic reticulum | 70.99 | 71.92 |
| VIT_13s0019g04770.t01 | Wine grape | cytosol | 67.01 | 70.67 |
| HORVU7Hr1G061610.1 | Barley | cytosol | 8.16 | 68.22 |
| GSMUA_Achr3P23130_001 | Banana | cytosol | 14.27 | 67.84 |
| Solyc11g008340.1.1 | Tomato | nucleus | 69.23 | 65.35 |
| HORVU7Hr1G061620.1 | Barley | plasma membrane | 16.03 | 62.01 |
| TraesCS7B01G181500.1 | Wheat | cytosol | 20.67 | 59.63 |
| Os08t0318500-01 | Rice | plasma membrane | 58.02 | 59.17 |
| TraesCS7A01G284500.1 | Wheat | cytosol | 57.65 | 59.07 |
| TraesCS7D01G282100.6 | Wheat | plastid | 23.08 | 58.87 |
| EER99853 | Sorghum | cytosol | 57.28 | 58.75 |
| Zm00001d022502_P003 | Maize | cytosol | 57.65 | 58.19 |
| GSMUA_Achr3P23140_001 | Banana | cytosol | 44.39 | 57.09 |
| HORVU7Hr1G061640.1 | Barley | cytosol | 13.9 | 56.82 |
Protein Annotations
| MapMan:22.6.3.5 | GO:A0A078HX48 | UniProt:A0A078HX48 | EnsemblPlants:CDY41338 | ProteinID:CDY41338 | ProteinID:CDY41338.1 |
| GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 |
| GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | EnsemblPlantsGene:GSBRNA2T00072893001 | PFAM:PF04048 |
| PANTHER:PTHR14146 | InterPro:Sec8_exocyst | UniParc:UPI0004EF15E0 | SEG:seg | : | : |
Description
BnaA01g31810DBnaA01g31810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HX48]
Coordinates
chrLK032495:-:176791..185502
Molecular Weight (calculated)
120361.0 Da
IEP (calculated)
6.013
GRAVY (calculated)
-0.276
Length
1079 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGIFDGLPVP SDKTYLRDEL ARIDESWAVA RFDSLPHVVH ILTSKDRETD VLLLKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKLGDL
0101: KHDLADAKRS LGTRNKQLHQ LWYRSVTLRH IIALLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDDVPT TTAVAASRMS SQPLSRRTRT LKGDSQFVVR GLTNGSHRTS SIEEGSSFDG HDEEDSVEHD EATDSKLLSH
0301: QLTPWLSDST PDEFIEAVRK SDDPLHVKYL QTLVQCLCML GKVAAAGAII CQKLRPTIHE IIISKIKAHM ETRNLSKSAC SQGDQTVAAG LHFIKGQPEA
0401: YRLSKEKPQN RISNSGTHLA VSPVSPLMVP GGKAQAAAKD LLDSILDTIV KIFENHVVIG ELLELKASQH DINTPKSLPT NVNWNTDSEA SQVTGGYTIS
0501: YPLTVLQSEC QQLICEILRA TPEAASADAV AQTAKVAKKA SKKDKRQRYV FIRLGITIYG HRQYREDIRA EIYSDDLISR NAPEDGLTFT FRFTDATVSI
0601: SNQGADLIRQ GWGKKAPNSS QEGYGSAAVL PEQGIYLAAS IYRPVLQFTD KITSMLPKKH SQLVIDGLLT FTENFVKDHL LPTMFVDYRK GVQQAISSAA
0701: AFRPRAHTTT YTPTVEKGRP ILQGLLAIDL LAKEVLGWAQ AMPKFSTDLV KYVQTFLERT FERCRTSYME AVLEKLSYRL IGRHDIEKLM RLDPASACLP
0801: ALLGHSVSHS EAVGSDVELC ELFLSLPSIK QDSLIRDDNK LILLASLSDS LEYVADSIER LGQAVPRAAS QSEDNSRNQA TSPRNLASFA DEYRKLATDC
0901: LKVLRVEMQL ETVFHLQEMT NREYLEDEDA EEPDDFVISL TSQITRRDEG MSPFISGEKR NYVFGGICGI AANASIKALA DMRSINLFGV QQICRNTIAL
1001: EQAMAAIPYV DGESVQQNLD RVRTYFELLN MPFEALLTFI AEHDQMFTPT EYSNLLKVNV PGRDTPTDAQ SRLSEILSH
0101: KHDLADAKRS LGTRNKQLHQ LWYRSVTLRH IIALLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDDVPT TTAVAASRMS SQPLSRRTRT LKGDSQFVVR GLTNGSHRTS SIEEGSSFDG HDEEDSVEHD EATDSKLLSH
0301: QLTPWLSDST PDEFIEAVRK SDDPLHVKYL QTLVQCLCML GKVAAAGAII CQKLRPTIHE IIISKIKAHM ETRNLSKSAC SQGDQTVAAG LHFIKGQPEA
0401: YRLSKEKPQN RISNSGTHLA VSPVSPLMVP GGKAQAAAKD LLDSILDTIV KIFENHVVIG ELLELKASQH DINTPKSLPT NVNWNTDSEA SQVTGGYTIS
0501: YPLTVLQSEC QQLICEILRA TPEAASADAV AQTAKVAKKA SKKDKRQRYV FIRLGITIYG HRQYREDIRA EIYSDDLISR NAPEDGLTFT FRFTDATVSI
0601: SNQGADLIRQ GWGKKAPNSS QEGYGSAAVL PEQGIYLAAS IYRPVLQFTD KITSMLPKKH SQLVIDGLLT FTENFVKDHL LPTMFVDYRK GVQQAISSAA
0701: AFRPRAHTTT YTPTVEKGRP ILQGLLAIDL LAKEVLGWAQ AMPKFSTDLV KYVQTFLERT FERCRTSYME AVLEKLSYRL IGRHDIEKLM RLDPASACLP
0801: ALLGHSVSHS EAVGSDVELC ELFLSLPSIK QDSLIRDDNK LILLASLSDS LEYVADSIER LGQAVPRAAS QSEDNSRNQA TSPRNLASFA DEYRKLATDC
0901: LKVLRVEMQL ETVFHLQEMT NREYLEDEDA EEPDDFVISL TSQITRRDEG MSPFISGEKR NYVFGGICGI AANASIKALA DMRSINLFGV QQICRNTIAL
1001: EQAMAAIPYV DGESVQQNLD RVRTYFELLN MPFEALLTFI AEHDQMFTPT EYSNLLKVNV PGRDTPTDAQ SRLSEILSH
0001: MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
Arabidopsis Description
SEC8SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.