Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10380.1 | CDX68084 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDX85974 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDY13565 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDY45948 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDY45950 | AT1G76850.1 | 24307681 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00928 | Canola | cytosol | 98.77 | 97.38 |
| Bra029834.1-P | Field mustard | cytosol | 98.96 | 94.74 |
| AT3G10380.1 | Thale cress | cytosol | 93.08 | 93.26 |
| CDY41338 | Canola | nucleus | 93.08 | 91.01 |
| CDY56705 | Canola | cytosol | 92.89 | 90.91 |
| CDX73930 | Canola | cytosol | 91.37 | 90.6 |
| CDY00666 | Canola | cytosol | 90.62 | 89.85 |
| KRH34813 | Soybean | cytosol | 73.46 | 72.7 |
| KRG91961 | Soybean | endoplasmic reticulum | 73.36 | 72.68 |
| VIT_13s0019g04770.t01 | Wine grape | cytosol | 68.63 | 70.77 |
| HORVU7Hr1G061610.1 | Barley | cytosol | 8.34 | 68.22 |
| GSMUA_Achr3P23130_001 | Banana | cytosol | 14.6 | 67.84 |
| Solyc11g008340.1.1 | Tomato | nucleus | 71.28 | 65.79 |
| HORVU7Hr1G061620.1 | Barley | plasma membrane | 16.3 | 61.65 |
| Os08t0318500-01 | Rice | plasma membrane | 60.57 | 60.4 |
| EER99853 | Sorghum | cytosol | 59.62 | 59.79 |
| TraesCS7A01G284500.1 | Wheat | cytosol | 59.43 | 59.54 |
| TraesCS7B01G181500.1 | Wheat | cytosol | 21.04 | 59.36 |
| TraesCS7D01G282100.6 | Wheat | plastid | 23.6 | 58.87 |
| Zm00001d022502_P003 | Maize | cytosol | 59.62 | 58.84 |
| GSMUA_Achr3P23140_001 | Banana | cytosol | 45.97 | 57.81 |
| HORVU7Hr1G061640.1 | Barley | cytosol | 14.22 | 56.82 |
Protein Annotations
| EnsemblPlants:CDY08608 | EnsemblPlantsGene:GSBRNA2T00000402001 | GO:A0A078F9Y1 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0015031 | InterPro:Sec8_exocyst | PANTHER:PTHR14146 | PFAM:PF04048 | ProteinID:CDY08608 | ProteinID:CDY08608.1 |
| SEG:seg | UniParc:UPI0004EEF53E | UniProt:A0A078F9Y1 | MapMan:22.6.3.5 | : | : |
Description
BnaA05g28440DBnaA05g28440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9Y1]
Coordinates
chrLK031986:+:901274..909457
Molecular Weight (calculated)
116857.0 Da
IEP (calculated)
5.977
GRAVY (calculated)
-0.281
Length
1055 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGIFDGLPVP SDKTYLREEL ARIDESWVAA RFDSLPHVVH IITSKDRETD ILLLREQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTDKIGDL
0101: KHDLAEAKKS LGTRNKQLHQ LWYRSVTLRH IIALLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELA KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSHRTA STEEGSSFDG HDEEDSVEHD EATGDGQTIR
0301: NGTDSKLLSY QLPPWLSDSS PDEFIEAVRK SDDPLHVKYL QTLVQCLCML GKVAAAGAII CQRLRPTIHE IIISKIKAHM ETKNLSKSAC SQGDRTGAAG
0401: LHFIKGQSEA YRLSKDKPQN GTSNSVTHLA VSPVSPLMAP GGKAQAAAKD LLDSILDTIV KIFENHVVVG ELLELRASQH DINTPKSLPT DVNWNADSEA
0501: SQATGGYTIS FPLTVLQSEC QQLICEILRA TPEAASADAA AQTAKLAKKA PKKDKRQRAN GVTFTFRFTD ATVSISNQAG ADLIRQGWGK RAPNSSQEGY
0601: GSAAVLPEQG MYLAASIYRP VLQFTDKITS MLPKKHSQLV NDGLLTFTEN FVKDHLLPTM FVDYRKGVQQ AISSAAAFRP RAHTTTYTPT VEKGRPILQG
0701: LLAIDLLAKE VLGWAQAMPK FATDLVKYVQ TFLERTFERC RTAYMEAVLE KLSYRLIGRH DIERLMRLDA ASACLPSQLG HSVSHSEAVG SEVELCELFL
0801: SLPSIKQDNL IRDDNKLILL ASLSDSLEYV ADSIERLGQA VPRAASQAEG NSRDQATSPR NLASFADEYR KLATDCLKVL RVEMQLETVF HLQEMTNREY
0901: LEDEDAEEPD DFVISLTSQI TRRDEGMAPF ISGEKRNYVF GGICGIAASA SIKALADMRS INLFGVQQIC RNTIALEQAM AAIPYVDGDS VQQNLDRVRT
1001: YYELLNMPFE ALLAFIAEHD QMFTPTEYSN LLKVNVPGRD TPSDAQVRLS EILSH
0101: KHDLAEAKKS LGTRNKQLHQ LWYRSVTLRH IIALLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELA KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSHRTA STEEGSSFDG HDEEDSVEHD EATGDGQTIR
0301: NGTDSKLLSY QLPPWLSDSS PDEFIEAVRK SDDPLHVKYL QTLVQCLCML GKVAAAGAII CQRLRPTIHE IIISKIKAHM ETKNLSKSAC SQGDRTGAAG
0401: LHFIKGQSEA YRLSKDKPQN GTSNSVTHLA VSPVSPLMAP GGKAQAAAKD LLDSILDTIV KIFENHVVVG ELLELRASQH DINTPKSLPT DVNWNADSEA
0501: SQATGGYTIS FPLTVLQSEC QQLICEILRA TPEAASADAA AQTAKLAKKA PKKDKRQRAN GVTFTFRFTD ATVSISNQAG ADLIRQGWGK RAPNSSQEGY
0601: GSAAVLPEQG MYLAASIYRP VLQFTDKITS MLPKKHSQLV NDGLLTFTEN FVKDHLLPTM FVDYRKGVQQ AISSAAAFRP RAHTTTYTPT VEKGRPILQG
0701: LLAIDLLAKE VLGWAQAMPK FATDLVKYVQ TFLERTFERC RTAYMEAVLE KLSYRLIGRH DIERLMRLDA ASACLPSQLG HSVSHSEAVG SEVELCELFL
0801: SLPSIKQDNL IRDDNKLILL ASLSDSLEYV ADSIERLGQA VPRAASQAEG NSRDQATSPR NLASFADEYR KLATDCLKVL RVEMQLETVF HLQEMTNREY
0901: LEDEDAEEPD DFVISLTSQI TRRDEGMAPF ISGEKRNYVF GGICGIAASA SIKALADMRS INLFGVQQIC RNTIALEQAM AAIPYVDGDS VQQNLDRVRT
1001: YYELLNMPFE ALLAFIAEHD QMFTPTEYSN LLKVNVPGRD TPSDAQVRLS EILSH
0001: MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
Arabidopsis Description
SEC8SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.