Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10380.1 | CDX68084 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDX85974 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDY13565 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDY45948 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDY45950 | AT1G76850.1 | 24307681 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00666 | Canola | cytosol | 97.84 | 97.84 |
| Bra001356.1-P | Field mustard | cytosol | 96.62 | 95.81 |
| CDY08608 | Canola | nucleus | 90.6 | 91.37 |
| AT3G10380.1 | Thale cress | cytosol | 90.04 | 90.98 |
| CDY00928 | Canola | cytosol | 90.79 | 90.28 |
| CDY41338 | Canola | nucleus | 90.32 | 89.06 |
| CDY56705 | Canola | cytosol | 90.13 | 88.96 |
| KRG91961 | Soybean | endoplasmic reticulum | 70.96 | 70.89 |
| KRH34813 | Soybean | cytosol | 70.96 | 70.83 |
| VIT_13s0019g04770.t01 | Wine grape | cytosol | 66.64 | 69.31 |
| HORVU7Hr1G061610.1 | Barley | cytosol | 8.36 | 68.99 |
| GSMUA_Achr3P23130_001 | Banana | cytosol | 14.38 | 67.4 |
| Solyc11g008340.1.1 | Tomato | nucleus | 69.36 | 64.57 |
| HORVU7Hr1G061620.1 | Barley | plasma membrane | 15.6 | 59.5 |
| Os08t0318500-01 | Rice | plasma membrane | 59.02 | 59.36 |
| EER99853 | Sorghum | cytosol | 57.89 | 58.56 |
| TraesCS7A01G284500.1 | Wheat | cytosol | 57.61 | 58.21 |
| TraesCS7D01G282100.6 | Wheat | plastid | 23.03 | 57.92 |
| Zm00001d022502_P003 | Maize | cytosol | 58.08 | 57.81 |
| TraesCS7B01G181500.1 | Wheat | cytosol | 20.3 | 57.75 |
| GSMUA_Achr3P23140_001 | Banana | cytosol | 44.74 | 56.73 |
| HORVU7Hr1G061640.1 | Barley | cytosol | 13.63 | 54.92 |
Protein Annotations
| EnsemblPlants:CDX73930 | EnsemblPlantsGene:GSBRNA2T00111658001 | GO:A0A078CAW8 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0015031 | InterPro:Sec8_exocyst | PANTHER:PTHR14146 | PFAM:PF04048 | ProteinID:CDX73930 | ProteinID:CDX73930.1 |
| SEG:seg | UniParc:UPI0004EDDBB4 | MapMan:22.6.3.5 | : | : | : |
Description
BnaA03g31170D
Coordinates
chrLK031800:+:580468..589829
Molecular Weight (calculated)
118285.0 Da
IEP (calculated)
6.027
GRAVY (calculated)
-0.313
Length
1064 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGIFNDLPVP SDKTYLREEL ARIDESWAVA RFDSLPHVVH ILTSKDREAD IHVLREQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF RESTEKLGDL
0101: KHDLADAKKS LGTRNKQLHQ LWYRSVTLRH IISVLDQIES ISKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELS KLRGSLFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGAR GLTNGSHRSA SIEEGSSFDG HDEEDSVEHD EASADSKLLS
0301: YHLPPWLSDS TPDEFIEAIR KSDDPLHVKY LQTLVECLCM LGKVAAAGAI ICQKLRPTIH EIIISKIKAH METRNLSKSG SNQGDRTGAV GLHIIKGQSE
0401: AYRLSKDKPQ NGMPNSGSHL AMSPVSPLMA PGGKAQAAAK DLLDSILDTI VKIFENHVVI GELLELKASQ HDINTPKSLP TDVNWNTDPE ASQVTGGYTI
0501: SLPLTVLQSE CQQLICEILR ATPETASADA AAQTAKLAKK APKKDKRQVI LSIGSSYIHR DGFPNIMGAP EDGLTFTFRF TDATVSLSNQ GADLIRQGWG
0601: KRASNASQEG YGSAAVLPEQ GIYLAASIYR PVLQFTDKIT SMLPKKHSQL VNDGLLTFTE NFVKDHLLPT MFVDYRKGVQ QAISSAAAFR PRAHTSTYTP
0701: TVEKGRPILQ EEWMDTSHSM VLGWAQAMPK FATDLVKYVQ TFLERTFERC RTSYMEAVLE KLSYRLIGRH DIERLMRLDA ASACLLSSLG HSVSHSEAVG
0801: SGVELNDLFL SLPSIKQDNL IRDDNKLILL ASLSDSLEYV ADSIERLGQA VPRAASQDSN SRNQATSPRN LASFADEYRK LATDCLKVLR VEMQLETVFH
0901: LQEMTNREYL EDEDAEEPDD FVISLTSQIT RRDEGMAPFI SGEKRNYVFG GICGTAASAS IKALADMRSI NLFGVQQICR NTIALEQAMA AIPYIDGESV
1001: QQNLDRVRTY FELLNMPFEA LLAFIAEHDQ MFTPTEYSNL LKVNVPGRDT PPDAQHRLSE ILSH
0101: KHDLADAKKS LGTRNKQLHQ LWYRSVTLRH IISVLDQIES ISKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELS KLRGSLFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGAR GLTNGSHRSA SIEEGSSFDG HDEEDSVEHD EASADSKLLS
0301: YHLPPWLSDS TPDEFIEAIR KSDDPLHVKY LQTLVECLCM LGKVAAAGAI ICQKLRPTIH EIIISKIKAH METRNLSKSG SNQGDRTGAV GLHIIKGQSE
0401: AYRLSKDKPQ NGMPNSGSHL AMSPVSPLMA PGGKAQAAAK DLLDSILDTI VKIFENHVVI GELLELKASQ HDINTPKSLP TDVNWNTDPE ASQVTGGYTI
0501: SLPLTVLQSE CQQLICEILR ATPETASADA AAQTAKLAKK APKKDKRQVI LSIGSSYIHR DGFPNIMGAP EDGLTFTFRF TDATVSLSNQ GADLIRQGWG
0601: KRASNASQEG YGSAAVLPEQ GIYLAASIYR PVLQFTDKIT SMLPKKHSQL VNDGLLTFTE NFVKDHLLPT MFVDYRKGVQ QAISSAAAFR PRAHTSTYTP
0701: TVEKGRPILQ EEWMDTSHSM VLGWAQAMPK FATDLVKYVQ TFLERTFERC RTSYMEAVLE KLSYRLIGRH DIERLMRLDA ASACLLSSLG HSVSHSEAVG
0801: SGVELNDLFL SLPSIKQDNL IRDDNKLILL ASLSDSLEYV ADSIERLGQA VPRAASQDSN SRNQATSPRN LASFADEYRK LATDCLKVLR VEMQLETVFH
0901: LQEMTNREYL EDEDAEEPDD FVISLTSQIT RRDEGMAPFI SGEKRNYVFG GICGTAASAS IKALADMRSI NLFGVQQICR NTIALEQAMA AIPYIDGESV
1001: QQNLDRVRTY FELLNMPFEA LLAFIAEHDQ MFTPTEYSNL LKVNVPGRDT PPDAQHRLSE ILSH
0001: MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
Arabidopsis Description
SEC8SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.