Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G074320.5 | plasma membrane |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10380.1 | HORVU2Hr1G074320.5 | AT1G76850.1 | 24307681 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0318500-01 | Rice | plasma membrane | 90.15 | 22.5 |
| GSMUA_Achr3P23140_001 | Banana | cytosol | 70.45 | 22.17 |
| EER99853 | Sorghum | cytosol | 84.09 | 21.1 |
| Zm00001d022502_P003 | Maize | cytosol | 84.47 | 20.86 |
| KRG91961 | Soybean | endoplasmic reticulum | 61.36 | 15.21 |
| KRH34813 | Soybean | cytosol | 61.36 | 15.2 |
| AT3G10380.1 | Thale cress | cytosol | 58.71 | 14.72 |
| CDY08608 | Canola | nucleus | 56.82 | 14.22 |
| CDY56705 | Canola | cytosol | 57.58 | 14.1 |
| Solyc11g008340.1.1 | Tomato | nucleus | 60.61 | 14.0 |
| CDY41338 | Canola | nucleus | 56.82 | 13.9 |
| CDY00928 | Canola | cytosol | 56.06 | 13.83 |
| CDY00666 | Canola | cytosol | 55.3 | 13.72 |
| CDX73930 | Canola | cytosol | 54.92 | 13.63 |
| Bra029834.1-P | Field mustard | cytosol | 56.44 | 13.52 |
| Bra001356.1-P | Field mustard | cytosol | 54.92 | 13.51 |
| HORVU7Hr1G061610.1 | Barley | cytosol | 0.38 | 0.78 |
| HORVU7Hr1G061620.1 | Barley | plasma membrane | 0.0 | 0.0 |
| VIT_13s0019g04810.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| GSMUA_Achr3P23130_001 | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G061640.1 | EnsemblPlantsGene:HORVU7Hr1G061640 | PANTHER:PTHR14146 | UniParc:UPI000B47DA30 | UniProt:A0A287WP10 | MapMan:22.6.3.5 |
Description
No Description!
Coordinates
chrchr7H:-:289708638..289720392
Molecular Weight (calculated)
29829.6 Da
IEP (calculated)
4.421
GRAVY (calculated)
-0.197
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: GPAAFRPRVN ATSVYSSLVE NGRPVLQGLL AVDIIAKEVL GWVQLMPSYA TELVEYVRTF LERTHERCRA SYMEAVLEKQ SYILLSRSDV ESLMRLDPAN
101: ASLRNSFGQL DNNIPDAGIE VEIELSDLLL DMCPIKQENL IHDDQKLILL ASLSDSLEYL ADSVERLGES FISPSTISEN KTDIHQSHHT RTTSAIPKSL
201: ASLANEYRRL AVDCVRVLRL EMQLETIYHM QEMTKREYVE DQDAEDPDDF IISLTTQVGQ PMLV
101: ASLRNSFGQL DNNIPDAGIE VEIELSDLLL DMCPIKQENL IHDDQKLILL ASLSDSLEYL ADSVERLGES FISPSTISEN KTDIHQSHHT RTTSAIPKSL
201: ASLANEYRRL AVDCVRVLRL EMQLETIYHM QEMTKREYVE DQDAEDPDDF IISLTTQVGQ PMLV
0001: MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTESASQL YFR
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTESASQL YFR
Arabidopsis Description
SEC8SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.