Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10380.1 | CDX68084 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDX85974 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDY13565 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDY45948 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | CDY45950 | AT1G76850.1 | 24307681 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73930 | Canola | cytosol | 97.84 | 97.84 |
| AT3G10380.1 | Thale cress | cytosol | 90.04 | 90.98 |
| CDY08608 | Canola | nucleus | 89.85 | 90.62 |
| CDY00928 | Canola | cytosol | 90.04 | 89.53 |
| CDY41338 | Canola | nucleus | 89.94 | 88.69 |
| CDY56705 | Canola | cytosol | 89.66 | 88.5 |
| KRG91961 | Soybean | endoplasmic reticulum | 70.96 | 70.89 |
| KRH34813 | Soybean | cytosol | 70.96 | 70.83 |
| VIT_13s0019g04770.t01 | Wine grape | cytosol | 66.54 | 69.21 |
| HORVU7Hr1G061610.1 | Barley | cytosol | 8.18 | 67.44 |
| GSMUA_Achr3P23130_001 | Banana | cytosol | 14.38 | 67.4 |
| Solyc11g008340.1.1 | Tomato | nucleus | 69.17 | 64.39 |
| Os08t0318500-01 | Rice | plasma membrane | 58.46 | 58.79 |
| HORVU7Hr1G061620.1 | Barley | plasma membrane | 15.41 | 58.78 |
| EER99853 | Sorghum | cytosol | 57.61 | 58.27 |
| TraesCS7A01G284500.1 | Wheat | cytosol | 57.24 | 57.83 |
| TraesCS7D01G282100.6 | Wheat | plastid | 22.93 | 57.68 |
| Zm00001d022502_P003 | Maize | cytosol | 57.89 | 57.62 |
| TraesCS7B01G181500.1 | Wheat | cytosol | 20.02 | 56.95 |
| GSMUA_Achr3P23140_001 | Banana | cytosol | 44.17 | 56.02 |
| HORVU7Hr1G061640.1 | Barley | cytosol | 13.72 | 55.3 |
Protein Annotations
| EnsemblPlants:CDY00666 | EnsemblPlantsGene:GSBRNA2T00110495001 | GO:A0A078EHT2 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0015031 | InterPro:Sec8_exocyst | PANTHER:PTHR14146 | PFAM:PF04048 | ProteinID:CDY00666 | ProteinID:CDY00666.1 |
| SEG:seg | UniParc:UPI0004EEEE81 | MapMan:22.6.3.5 | : | : | : |
Description
BnaC03g36500D
Coordinates
chrLK031921:-:110182..119132
Molecular Weight (calculated)
118059.0 Da
IEP (calculated)
5.910
GRAVY (calculated)
-0.306
Length
1064 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGIFNDLPVP SDKTYLREEL ARIDESWAVA RFDSLPHVVH ILTSKDREAD IHILREQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF RESTEKLGDL
0101: KHDLADAKKS LGARNKQLHQ LWYRSVTLRH IISVLDQIES ISKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELS KLRGSLFFKI
0201: LDDLHAHLYN RGEYSSIASG IYERDDEVPT TTAVAASRMG SRPLSRRTRT LKGDSQFGVR GLTNGSHRSA SIEEGSSFDG HDEEDSVEHD EASADSKFLA
0301: HQLPPWLSDS TPDEFIEAVR KSDDPLHVKY LQTLVECLCM LGKVAAAGAI ICQKLRPTIH EIIISKIKAH METRNLSKSG SSQSDRTGAV GLHIIKGQSE
0401: AYRLSKEKPQ NGMPNSGSHL AVSPVSPLMA PGGKAQAAAK DLLDSILDTI VKIFENHVVI GELLELKASQ HDINTPKSLP TDVNWNTDPE ASQVTGGYTI
0501: SLPLTVLQSE CQQLICEILR ATPETASADA AAQTAKLAKK APKKDKRQVI LSIGSSYIHG DGFPNIMGAP EDGLTFTFRF TDATVSLSNQ GADLIRQGWG
0601: KRASNASQEG YGSAAVLPEQ GIYLAASIYR PVLQFTDKIT SMLPKKHSQL VNDGLLTFTE NFVKDHLLPT MFVDYRKGVQ QAISSAAAFR PRAHTSTYTS
0701: TVEKGRPILQ EEWMDTSHSM VLGWAQAMPK FATDLVKYVQ TFLERTFERC RTSYMEAVLE KLSYRLIGRH DIERLMRLDA ASACLPSSLG HSVSHSEAVG
0801: SGVELDDLFL SLPSIKQDNL IRDDNKLILL ASLSDSLEYV ADSIERLGQA VPCAASQDSN SRNQATSPRN LASFADEYRK LATDCLKVLR VEMQLETVFH
0901: LQEMTNREYL EDEDAEEPDD FVISLTSQIT RRDEGMAPFI SGEKRNYVFG GICGTAASAS TKALSDMRSI NLFGVQQICR NTIALEQAMA AIPYIDGESV
1001: QQNLDRVRTY FELLNMPFEA LLAFIAEHDQ MFTPTEYSNL LKVNVPGRDT PPDAQHRLSE ILSH
0101: KHDLADAKKS LGARNKQLHQ LWYRSVTLRH IISVLDQIES ISKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELS KLRGSLFFKI
0201: LDDLHAHLYN RGEYSSIASG IYERDDEVPT TTAVAASRMG SRPLSRRTRT LKGDSQFGVR GLTNGSHRSA SIEEGSSFDG HDEEDSVEHD EASADSKFLA
0301: HQLPPWLSDS TPDEFIEAVR KSDDPLHVKY LQTLVECLCM LGKVAAAGAI ICQKLRPTIH EIIISKIKAH METRNLSKSG SSQSDRTGAV GLHIIKGQSE
0401: AYRLSKEKPQ NGMPNSGSHL AVSPVSPLMA PGGKAQAAAK DLLDSILDTI VKIFENHVVI GELLELKASQ HDINTPKSLP TDVNWNTDPE ASQVTGGYTI
0501: SLPLTVLQSE CQQLICEILR ATPETASADA AAQTAKLAKK APKKDKRQVI LSIGSSYIHG DGFPNIMGAP EDGLTFTFRF TDATVSLSNQ GADLIRQGWG
0601: KRASNASQEG YGSAAVLPEQ GIYLAASIYR PVLQFTDKIT SMLPKKHSQL VNDGLLTFTE NFVKDHLLPT MFVDYRKGVQ QAISSAAAFR PRAHTSTYTS
0701: TVEKGRPILQ EEWMDTSHSM VLGWAQAMPK FATDLVKYVQ TFLERTFERC RTSYMEAVLE KLSYRLIGRH DIERLMRLDA ASACLPSSLG HSVSHSEAVG
0801: SGVELDDLFL SLPSIKQDNL IRDDNKLILL ASLSDSLEYV ADSIERLGQA VPCAASQDSN SRNQATSPRN LASFADEYRK LATDCLKVLR VEMQLETVFH
0901: LQEMTNREYL EDEDAEEPDD FVISLTSQIT RRDEGMAPFI SGEKRNYVFG GICGTAASAS TKALSDMRSI NLFGVQQICR NTIALEQAMA AIPYIDGESV
1001: QQNLDRVRTY FELLNMPFEA LLAFIAEHDQ MFTPTEYSNL LKVNVPGRDT PPDAQHRLSE ILSH
0001: MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTESASQL YFR
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTESASQL YFR
Arabidopsis Description
SEC8SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.