Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr6P25360_001 | plasma membrane |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10380.1 | GSMUA_Achr6P25360_001 | AT1G76850.1 | 24307681 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0019g04810.t01 | Wine grape | cytosol | 31.28 | 82.56 |
| HORVU7Hr1G061620.1 | Barley | plasma membrane | 73.57 | 59.86 |
| TraesCS7B01G181500.1 | Wheat | cytosol | 74.89 | 45.45 |
| Os08t0318500-01 | Rice | plasma membrane | 77.09 | 16.54 |
| EER99853 | Sorghum | cytosol | 74.89 | 16.16 |
| Zm00001d022502_P003 | Maize | cytosol | 75.77 | 16.09 |
| TraesCS7A01G284500.1 | Wheat | cytosol | 74.45 | 16.05 |
| KRG91961 | Soybean | endoplasmic reticulum | 71.37 | 15.21 |
| KRH34813 | Soybean | cytosol | 71.37 | 15.2 |
| AT3G10380.1 | Thale cress | cytosol | 68.28 | 14.72 |
| CDY08608 | Canola | nucleus | 67.84 | 14.6 |
| CDY00928 | Canola | cytosol | 67.84 | 14.39 |
| CDY00666 | Canola | cytosol | 67.4 | 14.38 |
| CDX73930 | Canola | cytosol | 67.4 | 14.38 |
| Solyc11g008340.1.1 | Tomato | nucleus | 72.25 | 14.35 |
| CDY41338 | Canola | nucleus | 67.84 | 14.27 |
| CDY56705 | Canola | cytosol | 67.4 | 14.19 |
| Bra001356.1-P | Field mustard | cytosol | 66.52 | 14.07 |
| Bra029834.1-P | Field mustard | cytosol | 67.84 | 13.97 |
| GSMUA_Achr3P23140_001 | Banana | cytosol | 1.32 | 0.36 |
| TraesCS7D01G282100.6 | Wheat | plastid | 0.44 | 0.24 |
| HORVU7Hr1G061640.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU7Hr1G061610.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P23130_001 | EnsemblPlants:GSMUA_Achr3T23130_001 | EnsemblPlantsGene:GSMUA_Achr3G23130_001 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0015031 | InterPro:Sec8_exocyst | PANTHER:PTHR14146 | PFAM:PF04048 | SEG:seg | UniParc:UPI000295199C |
| UniProt:M0SH29 | MapMan:22.6.3.5 | : | : | : | : |
Description
Probable exocyst complex component 4 [Source:GMGC_GENE;Acc:GSMUA_Achr3G23130_001]
Coordinates
chr3:+:23942113..23944760
Molecular Weight (calculated)
25830.1 Da
IEP (calculated)
7.391
GRAVY (calculated)
-0.253
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGRNKGIF DGLPIPADKA YLKEGLSRID ESWAAARFDS LPHVVHILTS KDREGEVQFL KEQSDLVEDV VDEVVHVYHH GFNKAIQNYS QILRLFSESA
101: ESISVLKVDM ANAKKLLGSR NKQLHQLWYR SLTLRHVLAL LDQIESVSKV PARIEKLIAD KQLYAAVQLH VQSMLVLERE GLQVVGALQD VRSELAKLRG
201: TLFYKVLEEL HNHIYNKGEY NKVCNTE
101: ESISVLKVDM ANAKKLLGSR NKQLHQLWYR SLTLRHVLAL LDQIESVSKV PARIEKLIAD KQLYAAVQLH VQSMLVLERE GLQVVGALQD VRSELAKLRG
201: TLFYKVLEEL HNHIYNKGEY NKVCNTE
0001: MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTESASQL YFR
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTESASQL YFR
Arabidopsis Description
SEC8SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.