Factsheet for HORVU7Hr1G061620.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G074320.5	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10380.1	HORVU2Hr1G074320.5	AT1G76850.1	24307681

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P23130_001	Banana	cytosol	59.86	73.57
VIT_13s0019g04810.t01	Wine grape	cytosol	22.58	73.26
TraesCS7B01G181500.1	Wheat	cytosol	97.85	72.99
TraesCS7A01G284500.1	Wheat	cytosol	97.49	25.83
Os08t0318500-01	Rice	plasma membrane	89.25	23.54
EER99853	Sorghum	cytosol	86.02	22.81
Zm00001d022502_P003	Maize	cytosol	86.74	22.64
KRH34813	Soybean	cytosol	65.95	17.26
KRG91961	Soybean	endoplasmic reticulum	65.59	17.18
AT3G10380.1	Thale cress	cytosol	63.08	16.71
Solyc11g008340.1.1	Tomato	nucleus	67.38	16.45
CDY08608	Canola	nucleus	61.65	16.3
CDY56705	Canola	cytosol	62.72	16.23
CDY41338	Canola	nucleus	62.01	16.03
CDY00928	Canola	cytosol	61.29	15.98
CDX73930	Canola	cytosol	59.5	15.6
Bra029834.1-P	Field mustard	cytosol	61.29	15.52
Bra001356.1-P	Field mustard	cytosol	59.5	15.47
CDY00666	Canola	cytosol	58.78	15.41
GSMUA_Achr3P23140_001	Banana	cytosol	6.09	2.03
TraesCS7D01G282100.6	Wheat	plastid	0.36	0.24
HORVU7Hr1G061640.1	Barley	cytosol	0.0	0.0
HORVU7Hr1G061610.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU7Hr1G061620.1	EnsemblPlantsGene:HORVU7Hr1G061620	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006904	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031
InterPro:Sec8_exocyst	PANTHER:PTHR14146	PFAM:PF04048	UniParc:UPI000B465BFF	UniProt:A0A287WPA8	MapMan:22.6.3.5

Description

No Description!

Coordinates

chrchr7H:+:289668268..289672238

Molecular Weight (calculated)

31391.7 Da

IEP (calculated)

6.853

GRAVY (calculated)

-0.311

Length

279 amino acids

Sequence
(BLAST)

001: MNRHRRGIFD GLPIPPDKSY LKEGLSRIDE GWAAARFDSL PHVVHILTSK DRDGEIQFLK EQSDLIEDVV DEVVHAYHHG FNKAIQNYSH ILRLFSESAE
101: SITGLKGEMA EAKKLLGRKN QHLGQLWYRS LTLRHVISLL DQVEDVAKVP ARIENLMAEK QLYAAVQLHV QSMLMLEREG LQAVGALQDV RSDLTKLRGA
201: LFYKILEELH CHLYNNGEYS LVTLSMVDSE DIPTSGATGR LISSMQPLSR RTMSIKGENH FSGPATADGI TKTSSVGWY

Best Arabidopsis Sequence Match ( AT3G10380.2 )
(BLAST)

0001: MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTESASQL YFR

Arabidopsis Description

SEC8SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.