Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS2A01G300100.3 | plasma membrane |
| TraesCS2B01G316400.1 | plasma membrane |
| TraesCS2D01G298000.2 | plasma membrane |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10380.1 | TraesCS2A01G300100.3 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | TraesCS2B01G316400.1 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | TraesCS2D01G298000.2 | AT1G76850.1 | 24307681 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G061610.1 | Barley | cytosol | 11.97 | 97.67 |
| HORVU7Hr1G061620.1 | Barley | plasma membrane | 25.83 | 97.49 |
| TraesCS7B01G181500.1 | Wheat | cytosol | 33.52 | 94.39 |
| TraesCS7D01G282100.6 | Wheat | plastid | 37.32 | 92.91 |
| Os08t0318500-01 | Rice | plasma membrane | 89.17 | 88.75 |
| EER99853 | Sorghum | cytosol | 86.8 | 86.88 |
| Zm00001d022502_P003 | Maize | cytosol | 86.23 | 84.94 |
| GSMUA_Achr3P23130_001 | Banana | cytosol | 16.05 | 74.45 |
| VIT_13s0019g04810.t01 | Wine grape | cytosol | 6.08 | 74.42 |
| KRH34813 | Soybean | cytosol | 64.01 | 63.23 |
| KRG91961 | Soybean | endoplasmic reticulum | 63.72 | 63.0 |
| GSMUA_Achr3P23140_001 | Banana | cytosol | 49.86 | 62.57 |
| AT3G10380.1 | Thale cress | cytosol | 60.59 | 60.59 |
| CDY08608 | Canola | nucleus | 59.54 | 59.43 |
| Solyc11g008340.1.1 | Tomato | nucleus | 64.1 | 59.06 |
| CDY00928 | Canola | cytosol | 59.54 | 58.6 |
| CDY56705 | Canola | cytosol | 59.83 | 58.44 |
| CDY41338 | Canola | nucleus | 59.07 | 57.65 |
| CDX73930 | Canola | cytosol | 58.21 | 57.61 |
| CDY00666 | Canola | cytosol | 57.83 | 57.24 |
| Bra029834.1-P | Field mustard | cytosol | 59.64 | 56.99 |
| Bra001356.1-P | Field mustard | cytosol | 56.51 | 55.45 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G284500.1 | EnsemblPlantsGene:TraesCS7A01G284500 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 |
| InterPro:Sec8_exocyst | PANTHER:PTHR14146 | PFAM:PF04048 | SEG:seg | MapMan:22.6.3.5 | : |
Description
No Description!
Coordinates
chr7A:+:323432678..323479128
Molecular Weight (calculated)
116751.0 Da
IEP (calculated)
5.651
GRAVY (calculated)
-0.203
Length
1053 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNRHRRGIFD GLPIPADKSY LKEGLSRIDE GWAAARFDSL PHVVHILTSK DRDGEIQFLK EQSDLIEDVV DEVVHAYHHG FNKAIQNYSQ ILRLFSESAE
0101: SITGLKGEMS EAKKLLGRKN QHLGQLWYRS LTLRHVISLL DQVEDVAKVP ARIENLMAEK QLYAAVQLHV QSMLMLEREG LQAVGALQDV RSDLTKLRGA
0201: LFYKILEELH CHLYNNGEYS LVTLSMVDSE DIPTSGATGR LVNSMQPLSR RTMSIKGENH FSGPATADGI TKTSSVGCSS FDGPDDDSSL GGGCGRKDSK
0301: SFSCEIPIFL SCATPDEFLE SMRKADAPLN VKYLRTLVQC LSMLQKVAAA GAVICQRVRP TIHDVITSKI KSYAREASKS NIDKVAKRTA SDVSHSHGAV
0401: TRYQLPKQKK KNEASTLATQ LVASPISPVM APTGDAQHAA SQLLGSIFEC LVGILENHIT VGELLEQKSS TDVDSVNTPH VANGDTSWNP DSEYSQPTGG
0501: FSVAFSLSVV QSECQQLLCE ILRATPEAAT ADAAVQTARL ANKDPVKEKR DGSEGLSFAF RVTDAAISVQ NEGQGWRRNP AVPQEGYGTA SIIPDQGIFL
0601: AASVYRPVFE FMNKIGLMLP RKYSQLGNDG LLAFVNNFLK EHFLPAIFVD YRKCVQQAIS SPAAFRPRVN ATSVYSSLVE NGRPVLQGLL AVDIIAKEVL
0701: GWVQLMPIYA AELVEYVRTF LERTHERCRA SYMEAVLEKQ SYILLSRSDV ESLMRLDPAN ASLQKSFGQL DNDIPDAGIE VEIELSDLLL DMCPIKQENL
0801: IHDDQKLILL ASLSDSLEYL ADSVERLGES FISPSTISEN KSDIHQSHRT RTTSAIPKSL ASLANEYRRL ATDCVRVLRL EMQLETIYHM QEMTKREYVE
0901: DQDAEDPDDF IISLTTQIAR RDEEMAPYIA ESKRNYVFGG ISSVAANASI KALALMKSIN LLGVQQICRN SIALEQALAA IPSIDSEAVQ QRLDRVRTFY
1001: ELLNLPFESL LGFIAEQEYF FSAKEYLSIL KVNVPGREIP MDAERRISQI LSH
0101: SITGLKGEMS EAKKLLGRKN QHLGQLWYRS LTLRHVISLL DQVEDVAKVP ARIENLMAEK QLYAAVQLHV QSMLMLEREG LQAVGALQDV RSDLTKLRGA
0201: LFYKILEELH CHLYNNGEYS LVTLSMVDSE DIPTSGATGR LVNSMQPLSR RTMSIKGENH FSGPATADGI TKTSSVGCSS FDGPDDDSSL GGGCGRKDSK
0301: SFSCEIPIFL SCATPDEFLE SMRKADAPLN VKYLRTLVQC LSMLQKVAAA GAVICQRVRP TIHDVITSKI KSYAREASKS NIDKVAKRTA SDVSHSHGAV
0401: TRYQLPKQKK KNEASTLATQ LVASPISPVM APTGDAQHAA SQLLGSIFEC LVGILENHIT VGELLEQKSS TDVDSVNTPH VANGDTSWNP DSEYSQPTGG
0501: FSVAFSLSVV QSECQQLLCE ILRATPEAAT ADAAVQTARL ANKDPVKEKR DGSEGLSFAF RVTDAAISVQ NEGQGWRRNP AVPQEGYGTA SIIPDQGIFL
0601: AASVYRPVFE FMNKIGLMLP RKYSQLGNDG LLAFVNNFLK EHFLPAIFVD YRKCVQQAIS SPAAFRPRVN ATSVYSSLVE NGRPVLQGLL AVDIIAKEVL
0701: GWVQLMPIYA AELVEYVRTF LERTHERCRA SYMEAVLEKQ SYILLSRSDV ESLMRLDPAN ASLQKSFGQL DNDIPDAGIE VEIELSDLLL DMCPIKQENL
0801: IHDDQKLILL ASLSDSLEYL ADSVERLGES FISPSTISEN KSDIHQSHRT RTTSAIPKSL ASLANEYRRL ATDCVRVLRL EMQLETIYHM QEMTKREYVE
0901: DQDAEDPDDF IISLTTQIAR RDEEMAPYIA ESKRNYVFGG ISSVAANASI KALALMKSIN LLGVQQICRN SIALEQALAA IPSIDSEAVQ QRLDRVRTFY
1001: ELLNLPFESL LGFIAEQEYF FSAKEYLSIL KVNVPGREIP MDAERRISQI LSH
0001: MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
Arabidopsis Description
SEC8SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.