Factsheet for TraesCS3D01G341800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G339100.1
TraesCS1A01G351000.1
TraesCS1B01G351400.1
TraesCS1B01G365200.1
TraesCS3D01G283600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07000.1	TraesCS1A01G339100.1	AT1G29640.1	21798944
AT1G07000.1	TraesCS1A01G351000.1	AT1G29640.1	21798944
AT1G07000.1	TraesCS1B01G351400.1	AT1G29640.1	21798944
AT1G07000.1	TraesCS1B01G365200.1	AT1G29640.1	21798944
AT1G07000.1	TraesCS3D01G283600.1	AT1G29640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G348200.1	Wheat	cytosol	99.69	99.23
TraesCS3B01G380100.1	Wheat	cytosol	99.38	98.62
HORVU3Hr1G088110.3	Barley	cytosol, plastid	99.07	92.07
OQU87774	Sorghum	cytosol	88.84	88.7
Os01t0827500-01	Rice	plasma membrane	89.61	88.65
TraesCS1D01G293400.1	Wheat	cytosol	82.48	81.35
GSMUA_Achr10P...	Banana	cytosol	54.11	57.5
VIT_06s0004g07440.t01	Wine grape	cytosol	46.05	47.37
PGSC0003DMT400065456	Potato	cytosol	45.74	47.05
CDY70944	Canola	cytosol	30.7	46.7
Solyc08g066070.1.1	Tomato	cytosol	45.27	46.28
AT5G58430.1	Thale cress	cytosol	44.34	45.83
KRH17115	Soybean	cytosol	45.58	45.65
Zm00001d043015_P001	Maize	mitochondrion	76.12	45.55
CDY02823	Canola	cytosol	17.52	45.38
CDY02822	Canola	cytosol	20.16	45.14
KRH72760	Soybean	cytosol	44.65	45.0
Bra020368.1-P	Field mustard	cytosol	33.33	44.98
Bra006767.1-P	Field mustard	cytosol	42.79	44.66
CDY60022	Canola	cytosol	42.48	44.34
CDY06667	Canola	cytosol	38.14	41.21
Bra015543.1-P	Field mustard	cytosol	38.14	41.21
CDY10240	Canola	cytosol	37.98	41.04
AT1G07000.1	Thale cress	cytosol	37.36	40.23
TraesCS5D01G218900.1	Wheat	cytosol	28.53	30.62
TraesCS7D01G290600.1	Wheat	cytosol	30.39	30.48
TraesCS7D01G260600.1	Wheat	cytosol	27.75	29.93
TraesCS3D01G424900.1	Wheat	cytosol	30.54	29.67
TraesCS7D01G133800.1	Wheat	cytosol	30.23	28.93
TraesCS3D01G299200.1	Wheat	peroxisome	26.82	28.88
TraesCS2D01G280500.1	Wheat	nucleus	29.92	28.26
TraesCS1D01G029000.1	Wheat	cytosol	22.48	27.0
TraesCS2D01G596000.1	Wheat	cytosol, mitochondrion, nucleus	26.2	26.53
TraesCS4D01G112900.1	Wheat	cytosol, mitochondrion	26.51	26.47
TraesCS4D01G109600.1	Wheat	cytosol	28.06	25.49
TraesCS5D01G130800.1	Wheat	plastid	28.06	25.14
TraesCS5D01G133200.1	Wheat	cytosol	24.34	24.34
TraesCS2D01G596100.1	Wheat	cytosol	22.79	23.08

Protein Annotations

EnsemblPlants:TraesCS3D01G341800.1	EnsemblPlantsGene:TraesCS3D01G341800	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	InterPro:Cullin_repeat-like_dom_sf
InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF30	PFAM:PF03081	SEG:seg	SUPFAM:SSF74788
MapMan:22.6.3.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:454890972..454893251

Molecular Weight (calculated)

70428.0 Da

IEP (calculated)

4.556

GRAVY (calculated)

-0.107

Length

645 amino acids

Sequence
(BLAST)

001: MAEDGEEKLL ATVQHIAKTL GRTGTMTEDI LKVFSNYDGR LSLDKLYAAA AAAGGGGAGE HSMSMPASSP PPVLPSAAAA AMPAPVTSLE RTVRTLDRQI
101: SQFVTMERLV WADSADADAF LEAVDDLIGT VQELDAAGTN RGLLDRADEL LSRCMARLED EFRALIERPD DAAPAAPGGF DSEQSDDEDY DADDGYGDEP
201: IPIAKPVTDF DVVIDALPPG SVSDVHQIAR RMVDAGFGRE CAEAYAAARR GFIDESVARL GIRSRTSDEV HSLPWEELEF DIARWIPAFK MVFRILIPSE
301: RRLSDRVFEG LAPYGDLAFV AAVRTQALQL ISFGDAVAAA SRAPERLFRV IDMYEAVRDL LPDLDPVFAD PYSAALRAEV SAVCNTLGSS IKGIFMELEN
401: LIRRDPARVA VPGGGIHPIT RYVMNYLRAA CGSRQTLEEV MEGDLGALGV TAIAVDPDRP TSSLAVHIAW IMDVLHKNLE SKSKIYRDPP LASIFLMNNG
501: KYVIHKVNDS ELGVLLGDDW MKQMLSRVRR WSMEYQRGAW AKVMSVLQTG GSGFSGLPPK AMLQKLQMFN GYLEEIRAAQ SEWVITDDQL RADVKAAIAD
601: SVLPAYKGLI ARLRSSPDAP QDLFIKHTPE DVEACIQHLF EGIGK

Best Arabidopsis Sequence Match ( AT5G58430.1 )
(BLAST)

001: MAENGEEKLL AVARHIAKTL GHNESMADDI LQIFSNFDGR FSREKLAEGQ AGEDGSGVAT LERALNSIDG QISRFVAADQ PIWADPADSA AFLDTIDELV
101: AIIREWSPMA SEKPIGICLT RADDMMQQAM FRIEEEFRSL MERGAESFGL NPQGDAGAMN HRFDSEEEED DDRDFNNGDD IQIPVAQPLT DYDLIIDALP
201: SATINDLHEM AKRMLGAGFG KACSHVYSSC RREFLEESMS RLGLQKLSIE EVHKMPWQEL EDEIDRWIKA ANVALRILFP SERRLCDRVF FGFSSAADLS
301: FMEVCRGSTI QLLNFADAIA IGSRSPERLF KVLDVFETMR DLMPEFESVF SDQFCSVLRN EAVTIWKRLG EAIRGIFMEL ENLIRRDPAK AAVPGGGLHP
401: ITRYVMNYLR AACRSRQTLE QVFEESNGVP SKDSTLLTVQ MSWIMELLES NLEVKSKVYK DPALCYVFLM NNGRYIVQKV KDGDLGLLLG DDWIRKHNVK
501: VKQYHMNYQR SSWNKMLGLL KVDNTAAGMN GLGKTMKEKL KQFNIQFDEI CKVHSTWVVF DEQLKEELKI SLARLLVPAY GSFIGRFQNL GDIGKNADKY
601: IKYGVEDIEA RINELFKGTT TGRK

Arabidopsis Description

EXO70B1Exocyst complex component EXO70B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGH9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.