Factsheet for VIT_06s0004g07440.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70944	Canola	cytosol	49.92	73.82
AT5G58430.1	Thale cress	cytosol	70.18	70.51
Bra020368.1-P	Field mustard	cytosol	53.59	70.29
KRH17115	Soybean	cytosol	71.93	70.03
KRH72760	Soybean	cytosol	71.29	69.84
CDY60022	Canola	cytosol	67.78	68.77
Bra006767.1-P	Field mustard	cytosol	67.62	68.61
Solyc08g066070.1.1	Tomato	cytosol	68.42	67.99
CDY02823	Canola	cytosol	26.95	67.87
PGSC0003DMT400065456	Potato	cytosol	67.3	67.3
CDY02822	Canola	cytosol	30.3	65.97
GSMUA_Achr10P...	Banana	cytosol	47.69	49.26
OQU87774	Sorghum	cytosol	48.01	46.59
Os01t0827500-01	Rice	plasma membrane	48.01	46.17
TraesCS3D01G341800.1	Wheat	cytosol	47.37	46.05
TraesCS3B01G380100.1	Wheat	cytosol	47.53	45.85
Zm00001d038447_P001	Maize	plastid	42.42	45.78
Os05t0473500-01	Rice	plastid	43.38	45.71
TraesCS3A01G348200.1	Wheat	cytosol	47.21	45.68
TraesCS1A01G297800.1	Wheat	cytosol	47.21	45.26
TraesCS1D01G293400.1	Wheat	cytosol	47.21	45.26
TraesCS1B01G307200.1	Wheat	cytosol	46.89	45.02
Zm00001d010602_P001	Maize	extracellular, mitochondrion, plasma membrane	47.21	44.71
EES19684	Sorghum	cytosol	47.53	44.68
HORVU3Hr1G088110.3	Barley	cytosol, plastid	47.37	42.8
HORVU1Hr1G070390.1	Barley	cytosol, mitochondrion	47.05	42.63
EES01688	Sorghum	cytosol	33.33	39.21
Os01t0827600-01	Rice	cytosol	32.54	36.89
VIT_09s0002g00910.t01	Wine grape	cytosol	33.81	34.98
VIT_17s0000g01450.t01	Wine grape	cytosol	35.73	34.09
VIT_01s0146g00160.t01	Wine grape	nucleus	32.06	30.73
VIT_14s0068g00250.t01	Wine grape	cytosol	31.9	30.67
VIT_17s0000g07350.t01	Wine grape	cytosol	30.46	29.7
VIT_08s0007g02340.t01	Wine grape	cytosol	29.35	28.4
VIT_13s0073g00170.t01	Wine grape	cytosol	29.19	28.15
VIT_08s0040g02730.t01	Wine grape	plastid	26.48	26.14
VIT_06s0004g04010.t01	Wine grape	plastid	25.52	25.97
Zm00001d043015_P001	Maize	mitochondrion	42.26	24.58
VIT_00s0317g00140.t01	Wine grape	plastid	24.24	24.44

Protein Annotations

EntrezGene:100255378	wikigene:100255378	MapMan:22.6.3.1	UniProt:A5B8C4	EMBL:AM450229	ProteinID:CAN59816
ProteinID:CAN59816.1	ProteinID:CCB43437	ProteinID:CCB43437.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	EMBL:FN594951
GO:GO:0000145	GO:GO:0005575	GO:GO:0005576	GO:GO:0005615	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0006810	GO:GO:0006887	GO:GO:0006950
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009414	GO:GO:0009605	GO:GO:0009607
GO:GO:0009628	GO:GO:0009719	GO:GO:0009789	GO:GO:0009987	GO:GO:0016020	GO:GO:0042742
GO:GO:0050832	GO:GO:0070062	GO:GO:0090333	EntrezGene:LOC100255378	wikigene:LOC100255378	PFAM:PF03081
PANTHER:PTHR12542	PANTHER:PTHR12542:SF29	SUPFAM:SSF74788	TIGR:TC54217	TIGR:TC68190	UniParc:UPI0001520599
ArrayExpress:VIT_06s0004g07440	EnsemblPlantsGene:VIT_06s0004g07440	EnsemblPlants:VIT_06s0004g07440.t01	unigene:Vvi.7766	RefSeq:XP_002272867	RefSeq:XP_002272867.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6:+:8246824..8248976

Molecular Weight (calculated)

70893.5 Da

IEP (calculated)

4.990

GRAVY (calculated)

-0.312

Length

627 amino acids

Sequence
(BLAST)

001: MAEHGEEKLL AVARHIAKTL GHNDSTADDI LQIFSNFDGR FSRDKLSEKM GDGDPRSCAA LEHTLKSLDR QISQYVAADQ PIWADSVDAG AFLDAVDELI
101: ATLREWHPMT GEKSVAACLD RAEDLLQQAM FRVEDEFRSL MERGGESFEL SRPLGPGESA GNYLFDSEDE DDDGGMIGCG DDHQIPIAHP ISDYDILIDA
201: LPSVTINDLH EIAKRMVAAG FGKECSHVYS SCRREFLEES ISRLGLQKLS IEEIQKMAWC DLEDQIERWT KAATVALRIL FPSERRLCDR VFFGFSSAAN
301: LSFMEVCRGS TIQLLNFADA VAIGSRSPER LFKVLDVFET LRDLMPEFEA VFSDQYCLLL RNEAITIWRR LGEAIRGILM ELENLIRRDP AKSEVPGGGL
401: HPITRYVMNY LRAACRSRQT LEQVFNESID DRTSSSSLSV QMAWIMELLE SNLEVKSRIY RDPALCSVFM MNNGKYIVQK VKDSELGLLL GDDWIRKHTA
501: KIRQYQVNYQ RSSWNKVLAV LKADNTSLAP NPSLNTMRER LKLFNLHFDE TCRAQSTWFI FDEQLREELR ISVVENLSQV YRNFLGRLQS VPEAGKHPEK
601: LIKYSVEEIG ARVNGLFQRG GGGGGGK

Best Arabidopsis Sequence Match ( AT5G58430.1 )
(BLAST)

001: MAENGEEKLL AVARHIAKTL GHNESMADDI LQIFSNFDGR FSREKLAEGQ AGEDGSGVAT LERALNSIDG QISRFVAADQ PIWADPADSA AFLDTIDELV
101: AIIREWSPMA SEKPIGICLT RADDMMQQAM FRIEEEFRSL MERGAESFGL NPQGDAGAMN HRFDSEEEED DDRDFNNGDD IQIPVAQPLT DYDLIIDALP
201: SATINDLHEM AKRMLGAGFG KACSHVYSSC RREFLEESMS RLGLQKLSIE EVHKMPWQEL EDEIDRWIKA ANVALRILFP SERRLCDRVF FGFSSAADLS
301: FMEVCRGSTI QLLNFADAIA IGSRSPERLF KVLDVFETMR DLMPEFESVF SDQFCSVLRN EAVTIWKRLG EAIRGIFMEL ENLIRRDPAK AAVPGGGLHP
401: ITRYVMNYLR AACRSRQTLE QVFEESNGVP SKDSTLLTVQ MSWIMELLES NLEVKSKVYK DPALCYVFLM NNGRYIVQKV KDGDLGLLLG DDWIRKHNVK
501: VKQYHMNYQR SSWNKMLGLL KVDNTAAGMN GLGKTMKEKL KQFNIQFDEI CKVHSTWVVF DEQLKEELKI SLARLLVPAY GSFIGRFQNL GDIGKNADKY
601: IKYGVEDIEA RINELFKGTT TGRK

Arabidopsis Description

EXO70B1Exocyst complex component EXO70B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGH9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.