Factsheet for TraesCS1A01G297800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G339100.1
TraesCS1A01G351000.1
TraesCS1B01G351400.1
TraesCS1B01G365200.1
TraesCS3D01G283600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07000.1	TraesCS1A01G339100.1	AT1G29640.1	21798944
AT1G07000.1	TraesCS1A01G351000.1	AT1G29640.1	21798944
AT1G07000.1	TraesCS1B01G351400.1	AT1G29640.1	21798944
AT1G07000.1	TraesCS1B01G365200.1	AT1G29640.1	21798944
AT1G07000.1	TraesCS3D01G283600.1	AT1G29640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G293400.1	Wheat	cytosol	99.08	99.08
TraesCS1B01G307200.1	Wheat	cytosol	98.93	99.08
HORVU1Hr1G070390.1	Barley	cytosol, mitochondrion	97.71	92.34
Zm00001d038447_P001	Maize	plastid	78.59	88.47
Zm00001d010602_P001	Maize	extracellular, mitochondrion, plasma membrane	89.45	88.37
EES19684	Sorghum	cytosol	89.91	88.16
Os05t0473500-01	Rice	plastid	79.97	87.9
TraesCS3A01G348200.1	Wheat	cytosol	81.19	81.94
GSMUA_Achr10P...	Banana	cytosol	53.82	57.99
CDY02822	Canola	cytosol	21.25	48.26
Bra020368.1-P	Field mustard	cytosol	34.71	47.49
VIT_06s0004g07440.t01	Wine grape	cytosol	45.26	47.21
CDY70944	Canola	cytosol	30.43	46.93
KRH17115	Soybean	cytosol	45.87	46.58
AT5G58430.1	Thale cress	cytosol	44.34	46.47
PGSC0003DMT400065456	Potato	cytosol	44.34	46.25
KRH72760	Soybean	cytosol	44.8	45.78
CDY60022	Canola	cytosol	43.12	45.63
Bra006767.1-P	Field mustard	cytosol	43.12	45.63
Solyc08g066070.1.1	Tomato	cytosol	43.73	45.32
CDY02823	Canola	cytosol	17.13	44.98
CDY10240	Canola	cytosol	38.99	42.71
Bra015543.1-P	Field mustard	cytosol	38.99	42.71
AT1G07000.1	Thale cress	cytosol	38.99	42.57
CDY06667	Canola	cytosol	38.84	42.55
TraesCS7A01G259600.1	Wheat	cytosol, nucleus, plastid	28.59	32.19
TraesCS3A01G429600.1	Wheat	cytosol	31.35	30.87
TraesCS5A01G213100.1	Wheat	cytosol	27.68	30.27
TraesCS7A01G290900.2	Wheat	cytosol	29.2	29.75
TraesCS7A01G134400.1	Wheat	cytosol	29.82	28.93
TraesCS2A01G281600.1	Wheat	cytosol	29.2	28.17
TraesCS3A01G302600.1	Wheat	peroxisome	25.54	27.88
TraesCS2A01G583800.2	Wheat	cytosol, mitochondrion, nucleus	26.61	27.32
TraesCS4A01G208500.1	Wheat	cytosol	27.83	25.71
TraesCS4A01G200100.3	Wheat	cytosol, mitochondrion	25.23	25.35
TraesCS5A01G122400.1	Wheat	mitochondrion	28.29	25.03
TraesCS5A01G125500.1	Wheat	cytosol, mitochondrion	23.39	24.02
TraesCS2A01G583700.1	Wheat	cytosol, plastid	23.09	23.78

Protein Annotations

EnsemblPlants:TraesCS1A01G297800.1	EnsemblPlantsGene:TraesCS1A01G297800	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	InterPro:Cullin_repeat-like_dom_sf
InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF30	PFAM:PF03081	SEG:seg	SUPFAM:SSF74788
MapMan:22.6.3.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:492807199..492809448

Molecular Weight (calculated)

71176.5 Da

IEP (calculated)

4.574

GRAVY (calculated)

-0.144

Length

654 amino acids

Sequence
(BLAST)

001: MAEDGEEKLL ATVQHIVQTL GSSDTMTEDI LKVFSNYDGR LSLDKIYAAR GAVAAAAGGG GGGGGGGERS MPASPPLPPP PAAAVPGSSA RPPVTSMERT
101: VRTLDRQISQ FVTMDRLIWA DSGDADAFLE AVDDLIGTVQ ELDAAGTNRV LLDRADELLS RCMARLEDEF RALIERPDEA APSAPGGFAS DGSDDEEFYG
201: GADGYGDEPI PIAKPVTDYD VVIDALSPGS IANVHQISRR MVDAGFGREC AEAYAAARRG FVDESVARLG VRPRTAEEVH ASPWEELEFD IARWIPAFNM
301: VFRILIPSER RLCDRVFDGL APFGDLAFIA AVRTQALQLI SFGDAISSSS RSPERLFRVV DMYEAVRDIL PDLDPVFSDP YSAALRAEVS AVCNTLGSSI
401: KGIFMELENL IRRDPARVAT PGGGIHPITR YVMNYLRAAC GSRQTLEEVM EGDLGAGGRA SAAVDPDRPT SSLAVHIAWI MDVLHKNLDA KSKIYRDPSL
501: ACIFLMNNGK YIIQKVNDSE LGVLLGDDWI KQLSTRVRRW SMDYQRSTWG KVTTVLQIGG SGVGALPAKA MLQKLRMFNT YFEEIYAVQS EWVVADDQLR
601: MDVRAAVEDS VMPAYAALIN RLKSAPETGR DLYIKYTPED VEAHIQHLFE GAAK

Best Arabidopsis Sequence Match ( AT5G58430.1 )
(BLAST)

001: MAENGEEKLL AVARHIAKTL GHNESMADDI LQIFSNFDGR FSREKLAEGQ AGEDGSGVAT LERALNSIDG QISRFVAADQ PIWADPADSA AFLDTIDELV
101: AIIREWSPMA SEKPIGICLT RADDMMQQAM FRIEEEFRSL MERGAESFGL NPQGDAGAMN HRFDSEEEED DDRDFNNGDD IQIPVAQPLT DYDLIIDALP
201: SATINDLHEM AKRMLGAGFG KACSHVYSSC RREFLEESMS RLGLQKLSIE EVHKMPWQEL EDEIDRWIKA ANVALRILFP SERRLCDRVF FGFSSAADLS
301: FMEVCRGSTI QLLNFADAIA IGSRSPERLF KVLDVFETMR DLMPEFESVF SDQFCSVLRN EAVTIWKRLG EAIRGIFMEL ENLIRRDPAK AAVPGGGLHP
401: ITRYVMNYLR AACRSRQTLE QVFEESNGVP SKDSTLLTVQ MSWIMELLES NLEVKSKVYK DPALCYVFLM NNGRYIVQKV KDGDLGLLLG DDWIRKHNVK
501: VKQYHMNYQR SSWNKMLGLL KVDNTAAGMN GLGKTMKEKL KQFNIQFDEI CKVHSTWVVF DEQLKEELKI SLARLLVPAY GSFIGRFQNL GDIGKNADKY
601: IKYGVEDIEA RINELFKGTT TGRK

Arabidopsis Description

EXO70B1Exocyst complex component EXO70B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGH9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.