Factsheet for VIT_08s0007g02340.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0073g00170.t01	Wine grape	cytosol	81.48	81.23
KRH18527	Soybean	cytosol	59.72	79.96
Bra022586.1-P	Field mustard	cytosol	76.7	78.64
CDX91635	Canola	cytosol	76.7	78.64
CDY27076	Canola	cytosol	76.7	78.64
AT5G52340.1	Thale cress	cytosol	76.39	78.45
OQU82911	Sorghum	cytosol	56.64	75.83
Solyc10g081940.1.1	Tomato	cytosol	74.85	75.78
PGSC0003DMT400072333	Potato	cytosol	74.85	75.78
Os11t0157400-01	Rice	plasma membrane	73.61	74.18
Zm00001d052779_P001	Maize	cytosol, mitochondrion	72.38	73.97
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	66.51	73.42
TraesCS4D01G112900.1	Wheat	cytosol, mitochondrion	72.07	72.29
TraesCS4B01G115200.1	Wheat	cytosol, mitochondrion	71.91	72.14
TraesCS4A01G200100.3	Wheat	cytosol, mitochondrion	72.07	71.74
HORVU4Hr1G021040.3	Barley	mitochondrion	71.76	71.21
Os12t0159700-00	Rice	plasma membrane	68.52	68.94
GSMUA_Achr5P26180_001	Banana	cytosol	68.67	68.25
EES13134	Sorghum	cytosol	65.43	67.09
Os04t0685600-01	Rice	plasma membrane	65.43	66.88
TraesCS2D01G596000.1	Wheat	cytosol, mitochondrion, nucleus	65.12	66.25
TraesCS2B01G602800.1	Wheat	mitochondrion	64.97	66.09
TraesCS2A01G583800.2	Wheat	cytosol, mitochondrion, nucleus	64.97	66.09
Zm00001d001765_P001	Maize	mitochondrion	64.81	65.52
GSMUA_Achr2P20450_001	Banana	plastid	64.35	62.43
Zm00001d023472_P001	Maize	cytosol	57.25	59.17
TraesCS5D01G133200.1	Wheat	cytosol	58.64	58.91
TraesCS5A01G125500.1	Wheat	cytosol, mitochondrion	57.87	58.87
HORVU2Hr1G123320.1	Barley	cytosol	65.12	58.86
HORVU5Hr1G040140.3	Barley	cytosol	53.86	58.26
KXG23006	Sorghum	cytosol	56.33	57.84
AT5G52350.1	Thale cress	cytosol	49.23	54.44
Zm00001d023469_P001	Maize	cytosol	54.01	51.85
Os04t0685500-02	Rice	cytosol	39.51	47.23
TraesCS2A01G583700.1	Wheat	cytosol, plastid	45.52	46.46
TraesCS2D01G596100.1	Wheat	cytosol	45.52	46.31
TraesCS2B01G602900.1	Wheat	plastid	44.91	45.83
HORVU2Hr1G123350.29	Barley	cytosol	37.96	45.39
VIT_09s0002g00910.t01	Wine grape	cytosol	30.86	33.0
VIT_17s0000g01450.t01	Wine grape	cytosol	31.48	31.05
VIT_14s0068g00250.t01	Wine grape	cytosol	29.78	29.6
VIT_06s0004g07440.t01	Wine grape	cytosol	28.4	29.35
VIT_06s0004g04010.t01	Wine grape	plastid	26.7	28.08
VIT_17s0000g07350.t01	Wine grape	cytosol	27.78	27.99
VIT_01s0146g00160.t01	Wine grape	nucleus	27.47	27.22
VIT_00s0317g00140.t01	Wine grape	plastid	25.77	26.85
VIT_08s0040g02730.t01	Wine grape	plastid	24.23	24.72

Protein Annotations

Gene3D:1.20.1280.170	EntrezGene:100258036	wikigene:100258036	MapMan:22.6.3.1	EMBL:AM435917	ProteinID:CAN73810
ProteinID:CAN73810.1	ProteinID:CBI30382	ProteinID:CBI30382.3	InterPro:Cullin_repeat-like_dom_sf	UniProt:D7TH66	InterPro:Exo70
EMBL:FN595991	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	EntrezGene:LOC100258036	wikigene:LOC100258036
PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF41	SUPFAM:SSF74788	UniParc:UPI00015C9AE3	ArrayExpress:VIT_08s0007g02340
EnsemblPlantsGene:VIT_08s0007g02340	EnsemblPlants:VIT_08s0007g02340.t01	unigene:Vvi.21625	RefSeq:XP_002280545	RefSeq:XP_002280545.1	RefSeq:XP_003632655
RefSeq:XP_003632655.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr8:+:16397915..16406169

Molecular Weight (calculated)

73282.7 Da

IEP (calculated)

7.748

GRAVY (calculated)

-0.406

Length

648 amino acids

Sequence
(BLAST)

001: MGVPQAMQTL SERAAFTRES LQKSQTITDS MVAILGSFDH RLSALETAMR PTQIRTHSIR KAHENIDKTL KAAELILAQF DLTRKAEAKI LRGPHEDLES
101: YLEAMDQLRS IVHFFNCNKS YKSNAGVLNH VNNLLAKANL KIEEEFRQLL TSYSKPVEPD RLFDCLPHSL RPSSGSPGHQ GEATGKNPSS TNHSEHNKSL
201: ETAVYTAPTL IPPRILPLLH DLAQQMSQAG HQQQLYKIYR ETRASALEQS LRKLGVEKLT KDDVQKMQWE VLEAKIGNWI HFMRIAVKLL FSGEKKVCGQ
301: IFDGVDSLRD QCFAEVTANS VAVLLSFGDA IAKSKRSPEK LFVLLDMYEI MRELHSEIET IFEGQACVEM RESSLSLTKR LAQTAQETFG DFEEAVEKDA
401: TKTAVLDGTV HPLTSYVINY VKFLFDYQST LKQLFQEFGE GDADAQLASV TTQIMLALQN NLDGKSKQYK DPALTQLFLM NNIHYIVRSV RRSEAKDLLG
501: DDWVQIHRRI VQQHANQYKR VSWAKILQCL SIQGAASSGG GGAIAEAGSG SGVSRAMVKD RYKTFNIQFE ELHQRQSQWT VPDSELRESL RLAVAEVLLP
601: AYRSFIKRFG PMIENGKNPH KYIRYTPEDL EHMLSEFFEG KTLNELKR

Best Arabidopsis Sequence Match ( AT5G52340.1 )
(BLAST)

001: MGVAQAMEAL TERASLMKES LHKSQTITDN MVGILGSFDH RLSALETAMR PTQIRTHSIR RAHENIDKAL KAAEVILDQF DISRKAEAKI LRGPHEDLES
101: YLEAIDQLRG TIKFFSNNKM FKSASGVISH AHGLLSKALS KLEDEFRQIL QNYSKPMEPD RLFECLPSNL RPSSEGEGGG GKTHDPHHKS LENAIFTVPT
201: VIPPRVLPLL HDLAQQMVQA GHQQQLFKSY RDTRAAVLEQ SLRKLGVERL SKDDVQRMQW EVLEAKIGNW IHYMRISVKL LFAAEKKICD QILDGVESLR
301: DQCFGEVTVN SVAVLLSFGE AIAKSKRSPE KLFVLLDMYE IMRELQPEIE LLFGSKPCAE MKESALNLTK RLAQTAQETF ADFEEAVEKD ATKTAVMDGT
401: VHPLTSYVIN YVKFLFDYQT TLRLLFQEFD SKDPDSELGA VTTRIMHALQ NNLDGKSKQY KDVALTQLFL MNNVHYIVRS VRRSEAKDLL GDDWVQIHRR
501: IVQQHANQYK RVSWAKILQC LTVQSSGSGP IENSNISRAS VKDRFKTFNS QFEELHQRQC QWTVPDSELR ESLRLAVAEV LLPAFRSFLK RFGPMIESGK
601: NPQKYIRFSP EDLERMLNEF FEGKTWSEPK R

Arabidopsis Description

ATEXO70A2Exocyst subunit exo70 family protein A2 [Source:UniProtKB/TrEMBL;Acc:F4KG57]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.