Factsheet for Os04t0685600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611
plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13134	Sorghum	cytosol	94.01	94.3
Zm00001d001765_P001	Maize	mitochondrion	93.06	92.04
TraesCS2D01G596000.1	Wheat	cytosol, mitochondrion, nucleus	91.64	91.21
TraesCS2B01G602800.1	Wheat	mitochondrion	91.64	91.21
TraesCS2A01G583800.2	Wheat	cytosol, mitochondrion, nucleus	91.48	91.05
HORVU2Hr1G123320.1	Barley	cytosol	91.32	80.75
Bra028829.1-P	Field mustard	cytosol	34.54	67.8
CDX70300	Canola	cytosol	65.62	65.82
VIT_08s0007g02340.t01	Wine grape	cytosol	66.88	65.43
VIT_13s0073g00170.t01	Wine grape	cytosol	67.03	65.38
GSMUA_Achr5P26180_001	Banana	cytosol	67.19	65.34
Bra009523.1-P	Field mustard	cytosol	65.62	65.2
CDY10374	Canola	cytosol	65.62	65.2
KRH34637	Soybean	cytosol	65.77	65.05
Os11t0157400-01	Rice	plasma membrane	65.77	64.85
CDY10372	Canola	cytosol	30.6	64.67
KRG92152	Soybean	cytosol	66.09	64.66
KRH18527	Soybean	cytosol	49.21	64.46
PGSC0003DMT400043775	Potato	cytosol	57.89	64.16
AT5G03540.3	Thale cress	cytosol	66.72	63.7
Solyc04g009740.2.1	Tomato	nucleus	65.3	63.59
Solyc11g006620.1.1	Tomato	cytosol	65.14	62.77
AT5G52340.1	Thale cress	cytosol	61.99	62.28
Bra022586.1-P	Field mustard	cytosol	61.99	62.18
CDX91635	Canola	cytosol	61.99	62.18
CDY27076	Canola	cytosol	61.99	62.18
Os12t0159700-00	Rice	plasma membrane	62.3	61.34
Solyc10g081940.1.1	Tomato	cytosol	61.67	61.09
PGSC0003DMT400072333	Potato	cytosol	61.36	60.78
KRG88728	Soybean	cytosol	62.46	60.74
CDY44373	Canola	cytosol	52.21	58.79
KRG90170	Soybean	cytosol	34.23	58.18
Os04t0685500-02	Rice	cytosol	42.59	49.82
AT5G52350.1	Thale cress	cytosol	41.96	45.39
Os12t0165600-01	Rice	cytosol, plasma membrane	25.39	32.92
Os09t0439600-01	Rice	cytosol	30.91	30.72
Os01t0763750-01	Rice	cytosol	28.71	30.23
Os04t0382200-01	Rice	cytosol	30.44	28.05
Os08t0530300-01	Rice	plasma membrane	26.66	27.89
Os02t0505400-02	Rice	plasma membrane	30.13	27.72
Os05t0473500-01	Rice	plastid	25.55	27.23
Os01t0827500-01	Rice	plasma membrane	26.18	25.46
Os11t0167600-00	Rice	plasma membrane	27.29	25.0
Os08t0455700-01	Rice	cytosol	1.42	25.0
Os01t0827600-01	Rice	cytosol	21.61	24.77

Protein Annotations

MapMan:22.6.3.1	EntrezGene:4337464	UniProt:A0A0N7KJY7	ProteinID:BAS91729.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70
GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:Os04g0685600	EnsemblPlants:Os04t0685600-01	PFAM:PF03081
PANTHER:PTHR12542	PANTHER:PTHR12542:SF78	SUPFAM:SSF74788	UniParc:UPI000224CED7	RefSeq:XP_015636810.1	SEG:seg

Description

RAPID LEAF SENESCENCE 2Similar to H0723C07.3 protein. (Os04t0685600-01)

Coordinates

chr4:-:35022041..35028128

Molecular Weight (calculated)

71652.5 Da

IEP (calculated)

7.728

GRAVY (calculated)

-0.390

Length

634 amino acids

Sequence
(BLAST)

001: METLAQRAAL LRESLQKSQS VTDAVVSILG SFDSRLSALD AAMRPIQVRT HAVRTAHENI DRTLRSADVI LTQFDRTREA EREIQKGPHE NLQGFLDAVD
101: RLRSIERFFS SNRSYRSSDG VLNHVNALLS KALVKMEDEF QKQLTQRSKP IEPDRLFDCL PSTLRPSSES HPEGGKNQSH SENQQNSEAA VYSPPALIEP
201: RFIPFLAKLA QQLVQAGCQQ QCSEIYSEAR ASALESSLKS LGVEKLSKDE VQKMPWEILE SKIGNWIHFM RIAVKLLFAA ERQLCDQVFE CSQSLRDKCF
301: AQITRNSLAT LLSFGEAIAM SKRSPEKLFV LLDMYEIMCE LQADIDTIFV GESCSQMRES ALSLTKCLAQ TAQKTFSDFE EAVEKDATKN IHIDGTVHPL
401: TSYVINYVKF LFDYQSTLKQ LFQEFKREDG TGSELATVTM SIMQALQNNL DAKAKQYKDP ALMHIFLMNN IHYIVKSVRR SEAKDLLGDD WIQRHRRIVQ
501: QNANHYRRIA WSKVLQCLSG QGLTSSGGSG QVGSEGGNSS GASRAAVKER FRSFNVLFEE IYQKQCGWSV PDTELRESLR LAVAEILLPA YRSFLKRFGP
601: LIENSKAPGK YVKHTPEQVE LLLANLFEGK QERT

Best Arabidopsis Sequence Match ( AT5G03540.1 )
(BLAST)

001: MAVDSRMDLL SERAVLMRAS LQKSQTITDN VVSILGSFDS RLSALETAMR PTQIRTHAIR KAHENIDRTL KAAEVILSQF DLLRQAETKV LKGPHEDLES
101: YLDAIAQLRK IIRYFMSNKS FKSSDGVLNH ANSLLAKAQS KLEEEFKQLL ASYSKAVEPD RLFDGLPNSL RPSSDGDGGG KPHGGHHNDD AETAAYTLPI
201: LIPSRVLPLL HDLAQQMVQA GHQQQLLQIY RDTRSFVLEE SLKKLGVEKL SKEDVQRMQW EVLEAKIGNW IHFMRIAVKL LFAGERQVCD QIFRGFDSLS
301: DQCFAEVTVS SVSMLLSFGD AIARSKRSPE KLFVLLDMYE IMRELHTEIE TIFKGKACLE IRDSATGLTK RLAQTAQETF GDFEEAVEKD ATKTAVLDGT
401: VHPLTSYVIN YVKFLFDYQT TLKQLFLEFG NGDDSNSQLA SVTMRIMQAL QNNLDGKSKQ YKDPALTHLF LMNNIHYMVR SVRRSEAKDL LGDDWVQRHR
501: RIVQQHANQY KRVAWTKILQ SSSAQGLTSS GGGSLEGGNS SGVSRGLLKE RFKMFNMQFD ELHQRQSQWT VPDTELRESL RLAVAEVLLP AYRSFLKRFG
601: PLVESGKNPQ KYIKYTAEDL ERLLGELFEG KSMNEPRR

Arabidopsis Description

ATEXO70A1Exocyst subunit exo70 family protein A1 [Source:UniProtKB/TrEMBL;Acc:F4KGM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.