Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G424900.1 | Wheat | cytosol | 74.12 | 59.94 |
| EES01976 | Sorghum | cytosol | 69.09 | 56.38 |
| Zm00001d012020_P001 | Maize | cytosol | 67.04 | 53.57 |
| Zm00001d042331_P001 | Maize | cytosol, plastid | 55.31 | 52.11 |
| VIT_17s0000g01450.t01 | Wine grape | cytosol | 50.65 | 41.4 |
| GSMUA_Achr10P... | Banana | cytosol | 46.37 | 38.72 |
| KRH03960 | Soybean | nucleus | 47.67 | 38.44 |
| TraesCS7D01G260600.1 | Wheat | cytosol | 42.64 | 38.29 |
| KRH57228 | Soybean | cytosol | 47.49 | 38.23 |
| Solyc03g111320.1.1 | Tomato | cytosol | 47.11 | 38.05 |
| PGSC0003DMT400090181 | Potato | cytosol | 46.93 | 37.78 |
| TraesCS7D01G133800.1 | Wheat | cytosol | 46.93 | 37.39 |
| AT5G50380.1 | Thale cress | nucleus | 47.11 | 37.04 |
| TraesCS2D01G280500.1 | Wheat | nucleus | 47.11 | 37.04 |
| Bra014060.1-P | Field mustard | plastid | 45.25 | 36.27 |
| CDY05812 | Canola | cytosol, plastid | 45.25 | 36.27 |
| CDX71629 | Canola | cytosol | 45.07 | 36.23 |
| TraesCS3D01G299200.1 | Wheat | peroxisome | 35.01 | 31.39 |
| TraesCS5D01G218900.1 | Wheat | cytosol | 34.45 | 30.78 |
| TraesCS7D01G290600.1 | Wheat | cytosol | 36.5 | 30.48 |
| TraesCS4D01G112900.1 | Wheat | cytosol, mitochondrion | 32.4 | 26.93 |
| TraesCS2D01G596000.1 | Wheat | cytosol, mitochondrion, nucleus | 31.84 | 26.84 |
| TraesCS2D01G596100.1 | Wheat | cytosol | 29.8 | 25.12 |
| TraesCS5D01G133200.1 | Wheat | cytosol | 29.05 | 24.19 |
| TraesCS1D01G293400.1 | Wheat | cytosol | 28.12 | 23.09 |
| TraesCS4D01G109600.1 | Wheat | cytosol | 30.35 | 22.96 |
| TraesCS5D01G130800.1 | Wheat | plastid | 30.54 | 22.78 |
| TraesCS3D01G341800.1 | Wheat | cytosol | 27.0 | 22.48 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G029000.1 | EnsemblPlantsGene:TraesCS1D01G029000 | Gene3D:1.20.1280.170 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF19 | PFAM:PF03081 | SUPFAM:SSF74788 |
| MapMan:22.6.3.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:11413023..11414636
Molecular Weight (calculated)
60883.3 Da
IEP (calculated)
5.807
GRAVY (calculated)
-0.200
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MVADGPHVEA ALQGAMMRLE EEFRQLLING TVSLTAEDLH AFLLPGLSLT VPTSNSTWET LPLSGNESSG WGTQSSISDG EITPYRSFPD TRSALKDFSD
101: VMHSPLCLIF PHTVNTLKDI ANVMLQAGYA PELRQVYCRV RQDKLVECFT MLGVDKMSLE EVQHMEWGFL DGKMKKWTQA LRVVVQGLLA EERHICSQIF
201: TADAVTEEEC FTEVAKGCVL QLLRFGDAIA IVKRSPEKLF RILGMYEALA ELMSGLEALF SGEARDFIKK EAERILVSLG DAVRGTVADF ANMLQAESSR
301: RPLLGGEIHP ITRYVMNYVC LLVHYSRCMN HLLDDCETEL ENVDGTPWDH LVLTLITHLL NKIEDKSKLY DDDALQKIFL MNNLLYIVQK VNDSELKTVL
401: GDNWIRKHRG QIRACATGYL RSSWTRVLAC LRDDGLAHTM GSSSALKDAP KERFQNFNLA FEELYRTQTA WKVVDPQLRE ELKISISEKV LPAYRSFVGR
501: YRGQLEKGRN FAKYVKYRPE DLENQISDFF EGKKLNA
101: VMHSPLCLIF PHTVNTLKDI ANVMLQAGYA PELRQVYCRV RQDKLVECFT MLGVDKMSLE EVQHMEWGFL DGKMKKWTQA LRVVVQGLLA EERHICSQIF
201: TADAVTEEEC FTEVAKGCVL QLLRFGDAIA IVKRSPEKLF RILGMYEALA ELMSGLEALF SGEARDFIKK EAERILVSLG DAVRGTVADF ANMLQAESSR
301: RPLLGGEIHP ITRYVMNYVC LLVHYSRCMN HLLDDCETEL ENVDGTPWDH LVLTLITHLL NKIEDKSKLY DDDALQKIFL MNNLLYIVQK VNDSELKTVL
401: GDNWIRKHRG QIRACATGYL RSSWTRVLAC LRDDGLAHTM GSSSALKDAP KERFQNFNLA FEELYRTQTA WKVVDPQLRE ELKISISEKV LPAYRSFVGR
501: YRGQLEKGRN FAKYVKYRPE DLENQISDFF EGKKLNA
001: MATPETRGVD SDLETAEKII LRWDSTTSEE AKENLIFQSG GDREEVDRYL KAVDEVQRHI SSISISDEVK ATIQIAMARL EDELRNILIS QTSTFEPDSL
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ
Arabidopsis Description
ATEXO70D2At1g54090 [Source:UniProtKB/TrEMBL;Acc:Q9SYG5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.