Factsheet for Solyc03g115070.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g103010.2.1
Solyc01g103220.2.1
Solyc01g106560.2.1
Solyc01g108400.2.1
Solyc02g079150.1.1
Solyc02g087250.2.1
Solyc02g088800.1.1	plasma membrane
Solyc03g006640.2.1
Solyc03g120120.2.1
Solyc04g071350.2.1	plasma membrane
Solyc04g079820.2.1
Solyc06g007630.1.1
Solyc06g008600.2.1
Solyc06g051160.2.1
Solyc06g061020.2.1
Solyc06g066690.2.1
Solyc06g084040.2.1
Solyc08g007120.2.1
Solyc08g044250.1.1
Solyc08g066070.1.1	plasma membrane, plasma membrane
Solyc08g069100.1.1	plasma membrane
Solyc08g074980.2.1
Solyc08g077460.2.1
Solyc08g081340.2.1
Solyc09g005830.1.1	plasma membrane
Solyc09g005840.1.1	plasma membrane
Solyc09g065990.2.1
Solyc10g005480.2.1
Solyc10g080400.1.1
Solyc10g081940.1.1	plasma membrane
Solyc11g008340.1.1	plasma membrane
Solyc11g042420.1.1
Solyc12g043150.1.1
Solyc12g055770.1.1	plasma membrane
Solyc12g056520.1.1	plasma membrane
Solyc12g096370.1.1	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61010.1	Solyc08g066070.1.1	AT1G07000.1	24307681
AT5G61010.1	Solyc01g103220.2.1	AT1G22840.1	21798944
AT5G61010.1	Solyc11g042420.1.1	AT1G22840.1	21798944
AT5G61010.1	Solyc04g079820.2.1	AT1G47510.1	21798944
AT5G61010.1	Solyc12g055770.1.1	AT1G51640.1	24307681
AT5G61010.1	Solyc02g079150.1.1	AT1G61340.1	21798944
AT5G61010.1	Solyc03g006640.2.1	AT1G61340.1	21798944
AT5G61010.1	Solyc10g005480.2.1	AT1G61340.1	21798944
AT5G61010.1	Solyc08g074980.2.1	AT1G61590.1	21798944
AT5G61010.1	Solyc04g071350.2.1	AT1G76850.1	24307681
AT5G61010.1	Solyc12g056520.1.1	AT1G76850.1	24307681
AT5G61010.1	Solyc03g120120.2.1	AT1G79910.1	21798944
AT5G61010.1	Solyc06g066690.2.1	AT1G79910.1	21798944
AT5G61010.1	Solyc12g043150.1.1	AT1G79910.1	21798944
AT5G61010.1	Solyc01g103010.2.1	AT2G02560.1	21798944
AT5G61010.1	Solyc06g008600.2.1	AT2G30580.1	21798944
AT5G61010.1	Solyc06g084040.2.1	AT2G30580.1	21798944
AT5G61010.1	Solyc09g065990.2.1	AT2G30580.1	21798944
AT5G61010.1	Solyc10g080400.1.1	AT2G42260.1	21798944
AT5G61010.1	Solyc02g087250.2.1	AT3G01370.1	21798944
AT5G61010.1	Solyc08g044250.1.1	AT3G01370.1	21798944
AT5G61010.1	Solyc06g007630.1.1	AT3G07480.1	21798944
AT5G61010.1	Solyc09g005830.1.1	AT3G09530.1	24307681
AT5G61010.1	Solyc09g005840.1.1	AT3G09530.1	24307681
AT5G61010.1	Solyc11g008340.1.1	AT3G10380.1	24307681
AT5G61010.1	Solyc06g051160.2.1	AT3G17668.1	21798944
AT5G61010.1	Solyc01g108400.2.1	AT3G19100.1	21798944
AT5G61010.1	Solyc02g088800.1.1	AT3G29400.1	24307681
AT5G61010.1	Solyc06g061020.2.1	AT4G17680.1	21798944
AT5G61010.1	Solyc08g007120.2.1	AT4G17680.1	21798944
AT5G61010.1	Solyc08g077460.2.1	AT4G17680.1	21798944
AT5G61010.1	Solyc08g069100.1.1	AT4G31540.1	24307681
AT5G61010.1	Solyc12g096370.1.1	AT4G31540.1	24307681
AT5G61010.1	Solyc01g106560.2.1	AT4G33690.1	21798944
AT5G61010.1	Solyc08g081340.2.1	AT5G41370.1	21798944
AT5G61010.1	Solyc10g081940.1.1	AT5G52340.1	24307681
AT5G61010.1	Solyc08g066070.1.1	AT5G58430.1	24307681

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063083	Potato	cytosol	93.86	93.86
VIT_17s0000g07350.t01	Wine grape	cytosol	53.39	52.72
KRH63230	Soybean	cytosol	44.09	44.44
KRH54704	Soybean	cytosol	43.31	43.58
Solyc02g088800.1.1	Tomato	nucleus	44.25	42.64
CDY02176	Canola	cytosol	35.91	41.45
Bra012987.1-P	Field mustard	cytosol	35.75	41.27
AT5G61010.1	Thale cress	cytosol	40.79	40.53
GSMUA_Achr4P23470_001	Banana	cytosol	37.48	39.87
GSMUA_Achr7P00520_001	Banana	cytosol	36.38	38.12
KXG33434	Sorghum	peroxisome	34.96	36.63
TraesCS3D01G299200.1	Wheat	peroxisome	34.49	36.56
TraesCS3B01G333800.1	Wheat	cytosol	34.33	36.39
TraesCS3A01G302600.1	Wheat	peroxisome	34.33	36.39
Os01t0763750-01	Rice	cytosol	34.33	36.21
HORVU3Hr1G073850.1	Barley	cytosol, nucleus, peroxisome	34.02	35.76
HORVU3Hr1G073910.1	Barley	cytosol	33.39	35.39
Zm00001d043365_P001	Maize	peroxisome	34.96	34.74
Solyc03g111320.1.1	Tomato	cytosol	32.13	30.68
Solyc03g122240.2.1	Tomato	nucleus	27.09	29.35
Solyc06g062990.1.1	Tomato	cytosol	27.4	29.19
Solyc08g066070.1.1	Tomato	cytosol	28.03	28.21
Solyc01g009880.2.1	Tomato	nucleus	27.87	26.66
Solyc05g024340.1.1	Tomato	cytosol	24.72	26.52
CDY23090	Canola	nucleus	39.06	26.44
Solyc04g009740.2.1	Tomato	nucleus	26.77	26.11
Solyc11g006620.1.1	Tomato	cytosol	26.46	25.53
Solyc10g081940.1.1	Tomato	cytosol	25.35	25.16
Solyc06g005280.1.1	Tomato	plastid	23.62	25.08
Solyc02g094370.1.1	Tomato	cytosol	27.24	24.23
Solyc06g075610.1.1	Tomato	plastid	23.15	23.6
Solyc11g073010.1.1	Tomato	plastid	23.15	23.19
Solyc09g005840.1.1	Tomato	plastid	23.15	23.11
Solyc09g005830.1.1	Tomato	plastid	23.15	23.04
Solyc05g054820.1.1	Tomato	plastid	21.1	20.78

Protein Annotations

MapMan:22.6.3.1	ncoils:Coil	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575
GO:GO:0005576	GO:GO:0005615	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005886	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0070062	GO:GO:1903533	GO:GO:1903553	UniProt:K4BL09	PFAM:PF03081
PANTHER:PTHR12542	PANTHER:PTHR12542:SF49	SUPFAM:SSF74788	EnsemblPlantsGene:Solyc03g115070.1	EnsemblPlants:Solyc03g115070.1.1	UniParc:UPI0002768783
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:64897617..64899524

Molecular Weight (calculated)

73028.8 Da

IEP (calculated)

5.712

GRAVY (calculated)

-0.186

Length

635 amino acids

Sequence
(BLAST)

001: MEGDKSTDQH VIAAAQHLVK ALKDRTSLSD EVRRTLADLD IHLAAMTEAK EDETTSFKEI EGRLKSAEAK IMSLQSNCLK LWDTGPSNQL LEYLQNVEEV
101: RSIIVSLESM VLNKNRKQSR LTNQAHSVLQ IAMVRLQEEV INILAQSKQC FEHAYVSFHS CEETVVDEEM MVSIEYDSIE GTSCLDSSRA ESEECIIMDL
201: VHPGVVPYIK SIADLMLASH YVQEFCQVFI RFWKDALYEY LGLFCMQQIS IEDVLRMDWA SLNCRIKKWR QATKNVIAFY LPSERNLFDQ ILGEFGSVSS
301: TCFIEVSKDA MMCLLNFGQA VAIGPLLPER LFCLLDMYEL LRGLCQDVDA LFCVNHGNSI QVEYHELMKN LGDSAKAIFL GLGNRIASNT STTPFQGGGV
401: HPLTKYVINY FMLLSEYYVT LRFLLEDREV ENSGEVVDTL VKLDISSEIP CPLAFHLQSI TSRLESNLED RSNLYKDDSL KHIFLMNNIH YMVQKIKNSK
501: LRTCFGDEWI KIHIVKYVQH EKSYERKTWN SIISLITGYE KLGKAVLKER CRNFSIAFEE VYKNQTGWTI PDIDLRDDLN VSIGLRVIHA YRTFAGKVRK
601: SLSEKHIKYT EEDLEEYLLD FFQGSAKSLN HHWRR

Best Arabidopsis Sequence Match ( AT5G61010.1 )
(BLAST)

001: MAEFDSKVPV SGMNNHVFEA CHHVVKALRA SDNNLDANLR KLLSDLEMHL STFGIADTKV EDAGFSEIKK RFKEAVKRIR SWETNQSTMF EAGLSEADQF
101: FQALYDVQTV LVGFKALPMK TNQMEKDVYN QATVALDIAM LRLEKELCDV LHQHKRHVQP DYLAVSSRRK DIVYDESFVS LDDEVIVEAS SHEDDEQISD
201: FYNSDLVDPI VLPHIKAIAN AMFACEYDQP FCEAFIGVQR EALEEYMVTL EMERFSCVDV LRMDWEDLNG AMRKWTKVVK IITQVYLASE KQLCDQILGD
301: FESISTACFI EISKDAILSL LNFGEAVVLR SCKPEMLERF LSMYEVSAEI LVDVDNLFPD ETGSSLRIAF HNLSKKLADH TTTTFLKFKD AIASDESTRP
401: FHGGGIHHLT RYVMNYLKLL PEYTDSLNSL LQNIHVDDSI PEKTGEDVLP STFSPMARHL RSIVTTLESS LERKAQLYAD EALKSIFLMN NFRYMVQKVK
501: GSELRRLFGD EWIRKHIASY QCNVTNYERS TWSSILALLR DNNDSVRTLR ERCRLFSLAF DDVYKNQTRW SVPDSELRDD LHISTSVKVV QSYRGFLGRN
601: AVRIGEKHIR YTCEDIENML LDLFECLPSP RSLRSSRKR

Arabidopsis Description

ATEXO70E2Exocyst complex component EXO70E2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNR3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.