Factsheet for Solyc12g096370.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075284	Potato	cytosol	97.18	97.62
Solyc08g069100.1.1	Tomato	cytosol	82.79	83.28
KRH04947	Soybean	cytosol, endoplasmic reticulum	73.74	74.4
KRH16141	Soybean	cytosol	73.44	73.99
Bra010232.1-P	Field mustard	cytosol, plastid	49.7	70.08
AT4G31540.1	Thale cress	cytosol	69.73	68.41
CDY60850	Canola	cytosol	68.69	68.39
Bra011281.1-P	Field mustard	cytosol	68.55	68.24
CDX68762	Canola	cytosol	68.55	68.14
CDY23303	Canola	cytosol	68.4	68.09
CDY36434	Canola	cytosol	67.8	67.8
GSMUA_Achr3P05660_001	Banana	cytosol, mitochondrion	67.36	67.76
GSMUA_Achr5P04880_001	Banana	mitochondrion	65.43	66.52
GSMUA_Achr4P02260_001	Banana	mitochondrion	63.5	63.98
Os06t0698600-01	Rice	mitochondrion	56.68	57.62
VIT_04s0008g02340.t01	Wine grape	plastid	75.22	57.35
Os02t0149700-01	Rice	cytosol	46.14	55.94
Zm00001d014642_P001	Maize	cytosol	55.04	54.96
HORVU6Hr1G021690.1	Barley	cytosol	46.44	54.53
Zm00001d015277_P001	Maize	cytosol	54.01	54.33
TraesCS7B01G325400.1	Wheat	cytosol, plastid	54.45	54.21
EES06277	Sorghum	cytosol	54.3	54.14
TraesCS6A01G119800.1	Wheat	cytosol	53.26	53.66
TraesCS6B01G148100.1	Wheat	cytosol	53.26	53.66
TraesCS6D01G109700.1	Wheat	cytosol	53.26	53.66
TraesCS7D01G417000.1	Wheat	cytosol, plastid	54.01	53.61
TraesCS7A01G424500.1	Wheat	cytosol, plastid	53.86	53.46
HORVU7Hr1G098020.1	Barley	cytosol	53.86	53.15
EER88890	Sorghum	cytosol	53.71	53.08
Zm00001d000301_P001	Maize	cytosol	53.41	50.85
Solyc12g055770.1.1	Tomato	cytosol	44.36	45.58
Solyc04g077760.1.1	Tomato	cytosol	28.04	26.18

Protein Annotations

Gene3D:1.20.1280.170	MapMan:22.6.3.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150
GO:GO:0009987	UniProt:K4DHB0	PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF43	SUPFAM:SSF74788
EnsemblPlantsGene:Solyc12g096370.1	EnsemblPlants:Solyc12g096370.1.1	UniParc:UPI0002769BB7	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:-:65319961..65321985

Molecular Weight (calculated)

76393.9 Da

IEP (calculated)

7.971

GRAVY (calculated)

-0.143

Length

674 amino acids

Sequence
(BLAST)

001: MTQMDKGIEN LMSARKCLRA NFEKSKALGL SIEKAGPRFY EIIQRLPALE AAIRPIRAQK DALGAVGGHI NRAVVPATAV LKVFDAIHGL EKSLSDPQSD
101: LPGYLGVLKR LEEALRFLGE NCEMAIQWLA DIVEYLEDHA VADDRFTLSM KEALTSLREL HSGEEKGRLD GGLLEVALDR LESEFRRLLV ENTIPLPMSD
201: PALPGEQACI APSPLPVIVI QKLQAILGRL IANNRLDKCI SIYVEVRSSN VRTSLQALNL DYLEISVSEF NDVQSIEGHI AQWGKHLEFA VKHLFEAEYK
301: LCNDVFERIG LDVWMSCFAK IAAQAGILAF LQFGKTVTES KKDPIKLLKL LDIFASLNKL RLDFNRLFGG TACLEIQNLT RDLIKSVIEG ASEIFWELLV
401: QVELQRQMPP PPDGTVPKLI IFITDYCNKL LGDDYKSILT QVLIIERSWK QEKFQERLLI TELLNIMRAV DVNLETWSKA YQDVILSYVF LMNNHWHLYK
501: HLKGTKLGGL LGDSWLKEHE QYKEYYSAFF LKESWGKLPA LLSREGLILF SGGRATARDL VKKRLKAFNE AFDEMYKKQS NWVMLDKDLR DKTCQSIIQA
601: IVPVYRSYMQ NYGPLVEQEG SGKYVKYTAQ SLEKVLNGLF HSKPVKHGSF KVRHPSGKFS NVVTDQNQTS PTVK

Best Arabidopsis Sequence Match ( AT4G31540.1 )
(BLAST)

001: MMAESTGVDR GIQSLIAARK SLKLSLEKSK AIGLALGKTG PRFDEIEQRL PLLEAAVRPI RADGEALKDV GGNINRAVGP AAAVLKVFDA VHGLEKSLLS
101: DPKNDLSSYL SVLKRLEEAL KFLGENCGLA IQWLEDIVEY LDDHHVADEK YLSNLKKSLR GLSEFHNDRG GGEEKERSQL RLDGGLRNAA LDKLENEFRR
201: LLKDNSVPLP MASPSSLGDQ ACIAPSQLPV TVIHKLQAIL GRLRANNRLD KCISIYVEVR SLNVRASLQA LDLDYLDISV SEFNDVQSIE GYIAQWGNHL
301: EFAVKHLFEA EFKLCNDVFE RLGLNVWMDC FSKIAAQAGM LAFLQFGKTV TDSKKDPIKL LKLLDIFTSL NKLRADFNRL FGGAACIEIQ NFTRDLIKRI
401: IDGAAEIFWE LLVQVEIQKQ TPPPSDGGVP RLVSFVTDYC NKLIGDKYKS TLTQVLLIHK SWRSERFQDN QLMVEVLRII KAIEQNLDVW MKAYPDQTLA
501: HFFGMNNHWH LYKNLKGTNI GDHLGDSWLK EHDQYKEYYA TVFLRDSWGK LPSHLSREGL ILFSGGHATA RDLVKKRLKA FNDAFDEMYK KQASWVLPEK
601: DLRDRVCQQI VQAIVPVYRS YMQNYGPLVE KDASSSKYVR YTVVALEKIL SSLYMPKPMR YGSFKGTPPS EKFKNDVDLR RTTSAVV

Arabidopsis Description

ATEXO70G1EXO70-G1 protein [Source:UniProtKB/TrEMBL;Acc:Q7XYW9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.