Factsheet for GSMUA_Achr3P05660_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
mitochondrion 3
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P04880_001	Banana	mitochondrion	87.46	88.39
GSMUA_Achr4P02260_001	Banana	mitochondrion	83.28	83.41
KRH04947	Soybean	cytosol, endoplasmic reticulum	67.61	67.81
PGSC0003DMT400075284	Potato	cytosol	67.76	67.66
Solyc12g096370.1.1	Tomato	cytosol	67.76	67.36
KRH16141	Soybean	cytosol	67.01	67.12
Bra011281.1-P	Field mustard	cytosol	66.12	65.44
Solyc08g069100.1.1	Tomato	cytosol	65.37	65.37
CDY60850	Canola	cytosol	65.97	65.29
CDX68762	Canola	cytosol	65.82	65.04
PGSC0003DMT400075972	Potato	cytosol	64.48	64.48
CDY23303	Canola	cytosol	64.78	64.11
CDY36434	Canola	cytosol	64.33	63.95
Os06t0698600-01	Rice	mitochondrion	62.09	62.75
AT4G31540.1	Thale cress	cytosol	64.33	62.74
Bra010232.1-P	Field mustard	cytosol, plastid	44.48	62.34
Os02t0149700-01	Rice	cytosol	51.49	62.05
Zm00001d014642_P001	Maize	cytosol	61.64	61.19
EES06277	Sorghum	cytosol	60.15	59.62
TraesCS7B01G325400.1	Wheat	cytosol, plastid	60.15	59.53
Zm00001d015277_P001	Maize	cytosol	59.4	59.4
TraesCS7D01G417000.1	Wheat	cytosol, plastid	59.85	59.06
TraesCS7A01G424500.1	Wheat	cytosol, plastid	59.85	59.06
TraesCS6D01G109700.1	Wheat	cytosol	58.96	59.04
TraesCS6B01G148100.1	Wheat	cytosol	58.96	59.04
EER88890	Sorghum	cytosol	59.85	58.8
TraesCS6A01G119800.1	Wheat	cytosol	58.66	58.74
HORVU7Hr1G098020.1	Barley	cytosol	59.85	58.71
HORVU6Hr1G021690.1	Barley	cytosol	50.0	58.36
VIT_09s0018g02010.t01	Wine grape	cytosol	56.27	56.18
Zm00001d000301_P001	Maize	cytosol	59.25	56.07
VIT_09s0018g02030.t01	Wine grape	cytosol	55.52	55.69
VIT_04s0008g02340.t01	Wine grape	plastid	69.4	52.6
KRH47016	Soybean	cytosol	46.72	46.72
KRH44635	Soybean	cytosol	46.87	46.66
PGSC0003DMT400074204	Potato	cytosol	42.24	43.14
Solyc12g055770.1.1	Tomato	cytosol	42.24	43.14
CDY43917	Canola	cytosol	18.21	41.92
CDX87827	Canola	cytosol	38.06	41.4
AT1G51640.1	Thale cress	cytosol	40.45	41.06
CDY22856	Canola	cytosol	37.16	40.23
Bra018921.1-P	Field mustard	cytosol	37.16	40.23
Bra030432.1-P	Field mustard	cytosol	36.57	39.97
CDY71325	Canola	cytosol	29.85	39.84
CDY55664	Canola	cytosol	33.58	37.63
CDY43918	Canola	cytosol	15.07	35.44
GSMUA_AchrUn_...	Banana	cytosol	25.67	25.07

Protein Annotations

EnsemblPlants:GSMUA_Achr3P05660_001	EnsemblPlants:GSMUA_Achr3T05660_001	EnsemblPlantsGene:GSMUA_Achr3G05660_001	Gene3D:1.20.1280.170	GO:GO:0000145	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150
GO:GO:0009987	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF23	PFAM:PF03081
SEG:seg	SUPFAM:SSF74788	UniParc:UPI000295012B	UniProt:M0SC34	MapMan:22.6.3.1	:

Description

ATEXO70G1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G05660_001]

Coordinates

chr3:-:3769065..3771547

Molecular Weight (calculated)

75445.3 Da

IEP (calculated)

8.812

GRAVY (calculated)

-0.154

Length

670 amino acids

Sequence
(BLAST)

001: MEGGERGISS LVAARRSLQA SLEKSRTLGA ALARAGPRLD EILQRLPSLE AAVRPIRADR DALAAVGGHI DRAVGPAAAV LKVFDAVHGL ERSLLSDPRA
101: DLSGYLSVLK RLEEALRFLS DNCGLAVQWL DDIVEYLDDH ALADSRFIEA LKTSLASLKL SPYPLDGGLL AAALDKLESE FRRLLAEHTV PLPMPSDTVD
201: APTIAPSPIP VPVINKLRAI LLRITANSRL DRCISIYVDV RGSNIRASLG SLDLEYLEIT PAEFNDVQSI EGYVDKWSRH LEFAVKHLFE AELKVCIEVF
301: ERCGPRDVAL SCFAEIAAQA GILAFLRFGK TVTETRKDPI KLLKLLDIFA TLNRLRLDFN RLFGGKACVE IQNQTRDLIK RLIDGACEIF WELLHQVELQ
401: RQMPPPSQGS VPRLVSFVTD YCNKLLSEEY QPVLTQVLII HRSWKQEKFR ERLLTDAILD IFKALETNFE TWSKSYGDTI LSYLFAMNTH WHFYKNLKGT
501: KLGKLIGEAK LKEHEQYKDY YAAIFLRESW GKLPSLLSRE GLILFSGGRG KARDLVKQRL KAFNASFDEM YQKQSNWVIS DKELREKICQ WIVQTIVPTY
601: RSYMQNYGPL VEQDASASKY AKYTAQSLEK MLGSLFQHKP GRTMSLNIRH SNGKLNSVMN NLSRSASTVS

Best Arabidopsis Sequence Match ( AT4G31540.1 )
(BLAST)

001: MMAESTGVDR GIQSLIAARK SLKLSLEKSK AIGLALGKTG PRFDEIEQRL PLLEAAVRPI RADGEALKDV GGNINRAVGP AAAVLKVFDA VHGLEKSLLS
101: DPKNDLSSYL SVLKRLEEAL KFLGENCGLA IQWLEDIVEY LDDHHVADEK YLSNLKKSLR GLSEFHNDRG GGEEKERSQL RLDGGLRNAA LDKLENEFRR
201: LLKDNSVPLP MASPSSLGDQ ACIAPSQLPV TVIHKLQAIL GRLRANNRLD KCISIYVEVR SLNVRASLQA LDLDYLDISV SEFNDVQSIE GYIAQWGNHL
301: EFAVKHLFEA EFKLCNDVFE RLGLNVWMDC FSKIAAQAGM LAFLQFGKTV TDSKKDPIKL LKLLDIFTSL NKLRADFNRL FGGAACIEIQ NFTRDLIKRI
401: IDGAAEIFWE LLVQVEIQKQ TPPPSDGGVP RLVSFVTDYC NKLIGDKYKS TLTQVLLIHK SWRSERFQDN QLMVEVLRII KAIEQNLDVW MKAYPDQTLA
501: HFFGMNNHWH LYKNLKGTNI GDHLGDSWLK EHDQYKEYYA TVFLRDSWGK LPSHLSREGL ILFSGGHATA RDLVKKRLKA FNDAFDEMYK KQASWVLPEK
601: DLRDRVCQQI VQAIVPVYRS YMQNYGPLVE KDASSSKYVR YTVVALEKIL SSLYMPKPMR YGSFKGTPPS EKFKNDVDLR RTTSAVV

Arabidopsis Description

ATEXO70G1EXO70-G1 protein [Source:UniProtKB/TrEMBL;Acc:Q7XYW9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.