Factsheet for VIT_09s0018g02010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0018g02030.t01	Wine grape	cytosol	90.46	90.87
GSMUA_Achr3P05660_001	Banana	cytosol, mitochondrion	56.18	56.27
GSMUA_Achr5P04880_001	Banana	mitochondrion	54.1	54.75
GSMUA_Achr4P02260_001	Banana	mitochondrion	51.86	52.02
Os06t0698600-01	Rice	mitochondrion	47.09	47.66
KRH47016	Soybean	cytosol	47.54	47.61
Os02t0149700-01	Rice	cytosol	39.34	47.48
Solyc12g055770.1.1	Tomato	cytosol	46.2	47.26
KRH44635	Soybean	cytosol	47.39	47.25
PGSC0003DMT400074204	Potato	cytosol	46.05	47.1
TraesCS7B01G325400.1	Wheat	cytosol, plastid	47.39	46.97
Zm00001d015277_P001	Maize	cytosol	46.8	46.87
Zm00001d014642_P001	Maize	cytosol	47.09	46.81
TraesCS6B01G148100.1	Wheat	cytosol	46.65	46.79
TraesCS6A01G119800.1	Wheat	cytosol	46.65	46.79
VIT_04s0008g02340.t01	Wine grape	plastid	61.55	46.72
TraesCS7A01G424500.1	Wheat	cytosol, plastid	47.24	46.69
TraesCS6D01G109700.1	Wheat	cytosol	46.5	46.64
EES06277	Sorghum	cytosol	46.94	46.6
TraesCS7D01G417000.1	Wheat	cytosol, plastid	47.09	46.54
HORVU7Hr1G098020.1	Barley	cytosol	46.65	45.83
HORVU6Hr1G021690.1	Barley	cytosol	39.05	45.64
EER88890	Sorghum	cytosol	45.31	44.57
Zm00001d000301_P001	Maize	cytosol	46.8	44.35
CDY71325	Canola	cytosol	30.55	40.84
CDX87827	Canola	cytosol	37.41	40.75
Bra018921.1-P	Field mustard	cytosol	37.26	40.39
AT1G51640.1	Thale cress	cytosol	39.64	40.3
Bra030432.1-P	Field mustard	cytosol	36.81	40.29
CDY43918	Canola	cytosol	16.99	40.0
CDY22856	Canola	cytosol	36.51	39.58
CDY43917	Canola	cytosol	17.14	39.52
CDY55664	Canola	cytosol	34.72	38.96
VIT_18s0001g09020.t01	Wine grape	cytosol	26.53	25.61

Protein Annotations

Gene3D:1.20.1280.170	EntrezGene:100262054	wikigene:100262054	MapMan:22.6.3.1	ProteinID:CCB49740	ProteinID:CCB49740.1
ncoils:Coil	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	UniProt:F6HBV2	EMBL:FN595513	GO:GO:0000145
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887
GO:GO:0008150	GO:GO:0009987	EntrezGene:LOC100262054	wikigene:LOC100262054	PFAM:PF03081	PANTHER:PTHR12542
PANTHER:PTHR12542:SF43	SUPFAM:SSF74788	UniParc:UPI0001983FAE	ArrayExpress:VIT_09s0018g02010	EnsemblPlantsGene:VIT_09s0018g02010	EnsemblPlants:VIT_09s0018g02010.t01
RefSeq:XP_002273932	RefSeq:XP_002273932.2	RefSeq:XP_010655192.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:+:19633644..19635659

Molecular Weight (calculated)

75863.4 Da

IEP (calculated)

7.510

GRAVY (calculated)

-0.176

Length

671 amino acids

Sequence
(BLAST)

001: MAEVDSFQNL LAARMFLKTS LEKSRTVASG LEKTGPRLEE IKQRLSSLEA AVRPLRAQKC SLAAVGGHIS RAVGPAAAVL KVFDAIHGLE KSLSSDPTSD
101: LYGYLLVVKR LEEALRFLAE NCGLAIRWLE DVVEFLKDNG VTDDHRYLSN VTKSLNILRE LQASEERARL DGGLLSAAYD KLETEYRRLL GENGVPLPII
201: SSSSSIVAPS SLPVFVIQKL QATIERLRAN NRLENCISTY IDIRSSNVTA CLEALGLDYL EISIFEFDNF LNMESSVDLW SKHLEYAVKN LLELEYQLCN
301: DVFEKIGSDV SMDCFARIAI QSGFLAFIQF GNTVTESKKD AVKLFKLLKI FHTLNELRLD FNRLFGGKSC IEIRIPTRHL IKRVIDGACE IFWELLPQVE
401: AHKGTSPPSN GSVPSLVSFV VDYCNQLLQD DYRPTMIQVL EIHQNWKHQK FQEELLRKEV RNIVEAVQRN LDAWSKAYED TSLSYIFLMN NHCHLYKALK
501: GTSLGNLIGD SQLKEHKKNK DYYASIYLRE SWGMLPGLLG HEDETLFSGG RAMACSLVKK KLKAFNEALD GTYKKQSNWD VADENLRKRI CQLVVDAIVP
601: VYRSYIQKYG HFIEQDGIKN VKIYSEEGLV SMLSSMFQPK KGKCYSINTR HSIDKMSEIV TSRFPSTTVV A

Best Arabidopsis Sequence Match ( AT4G31540.1 )
(BLAST)

001: MMAESTGVDR GIQSLIAARK SLKLSLEKSK AIGLALGKTG PRFDEIEQRL PLLEAAVRPI RADGEALKDV GGNINRAVGP AAAVLKVFDA VHGLEKSLLS
101: DPKNDLSSYL SVLKRLEEAL KFLGENCGLA IQWLEDIVEY LDDHHVADEK YLSNLKKSLR GLSEFHNDRG GGEEKERSQL RLDGGLRNAA LDKLENEFRR
201: LLKDNSVPLP MASPSSLGDQ ACIAPSQLPV TVIHKLQAIL GRLRANNRLD KCISIYVEVR SLNVRASLQA LDLDYLDISV SEFNDVQSIE GYIAQWGNHL
301: EFAVKHLFEA EFKLCNDVFE RLGLNVWMDC FSKIAAQAGM LAFLQFGKTV TDSKKDPIKL LKLLDIFTSL NKLRADFNRL FGGAACIEIQ NFTRDLIKRI
401: IDGAAEIFWE LLVQVEIQKQ TPPPSDGGVP RLVSFVTDYC NKLIGDKYKS TLTQVLLIHK SWRSERFQDN QLMVEVLRII KAIEQNLDVW MKAYPDQTLA
501: HFFGMNNHWH LYKNLKGTNI GDHLGDSWLK EHDQYKEYYA TVFLRDSWGK LPSHLSREGL ILFSGGHATA RDLVKKRLKA FNDAFDEMYK KQASWVLPEK
601: DLRDRVCQQI VQAIVPVYRS YMQNYGPLVE KDASSSKYVR YTVVALEKIL SSLYMPKPMR YGSFKGTPPS EKFKNDVDLR RTTSAVV

Arabidopsis Description

ATEXO70G1EXO70-G1 protein [Source:UniProtKB/TrEMBL;Acc:Q7XYW9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.