Factsheet for VIT_09s0018g02030.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0018g02010.t01	Wine grape	cytosol	90.87	90.46
GSMUA_Achr3P05660_001	Banana	cytosol, mitochondrion	55.69	55.52
GSMUA_Achr5P04880_001	Banana	mitochondrion	53.89	54.3
GSMUA_Achr4P02260_001	Banana	mitochondrion	51.8	51.72
PGSC0003DMT400074204	Potato	cytosol	47.01	47.87
Os02t0149700-01	Rice	cytosol	39.82	47.84
Solyc12g055770.1.1	Tomato	cytosol	46.86	47.71
Os06t0698600-01	Rice	mitochondrion	46.71	47.06
KRH47016	Soybean	cytosol	47.16	47.01
KRH44635	Soybean	cytosol	47.31	46.95
EES06277	Sorghum	cytosol	47.46	46.89
Zm00001d015277_P001	Maize	cytosol	47.01	46.87
Zm00001d014642_P001	Maize	cytosol	47.01	46.52
TraesCS6A01G119800.1	Wheat	cytosol	46.56	46.49
TraesCS6B01G148100.1	Wheat	cytosol	46.56	46.49
TraesCS6D01G109700.1	Wheat	cytosol	46.41	46.34
VIT_04s0008g02340.t01	Wine grape	plastid	61.23	46.27
TraesCS7B01G325400.1	Wheat	cytosol, plastid	46.71	46.09
TraesCS7D01G417000.1	Wheat	cytosol, plastid	46.26	45.51
TraesCS7A01G424500.1	Wheat	cytosol, plastid	46.26	45.51
HORVU6Hr1G021690.1	Barley	cytosol	39.07	45.47
EER88890	Sorghum	cytosol	45.66	44.72
HORVU7Hr1G098020.1	Barley	cytosol	45.66	44.66
Zm00001d000301_P001	Maize	cytosol	47.01	44.35
CDX87827	Canola	cytosol	37.87	41.07
CDY71325	Canola	cytosol	30.84	41.04
Bra030432.1-P	Field mustard	cytosol	37.28	40.62
Bra018921.1-P	Field mustard	cytosol	37.28	40.23
AT1G51640.1	Thale cress	cytosol	39.67	40.15
CDY43917	Canola	cytosol	17.37	39.86
CDY43918	Canola	cytosol	16.92	39.65
CDY22856	Canola	cytosol	36.68	39.58
CDY55664	Canola	cytosol	34.43	38.46
VIT_18s0001g09020.t01	Wine grape	cytosol	26.2	25.18

Protein Annotations

Gene3D:1.20.1280.170	EntrezGene:100241555	wikigene:100241555	MapMan:22.6.3.1	ProteinID:CBI25295	ProteinID:CBI25295.3
InterPro:Cullin_repeat-like_dom_sf	UniProt:D7T463	InterPro:Exo70	EMBL:FN595513	GO:GO:0000145	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150
GO:GO:0009987	EntrezGene:LOC100241555	wikigene:LOC100241555	PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF43
SUPFAM:SSF74788	UniParc:UPI0001983FC4	ArrayExpress:VIT_09s0018g02030	EnsemblPlantsGene:VIT_09s0018g02030	EnsemblPlants:VIT_09s0018g02030.t01	RefSeq:XP_002274042
RefSeq:XP_002274042.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr9:+:19674807..19676813

Molecular Weight (calculated)

75832.6 Da

IEP (calculated)

7.024

GRAVY (calculated)

-0.142

Length

668 amino acids

Sequence
(BLAST)

001: MAEVDSFQNL LAARMLLKTS LEKSRSVASA LEKTGPRLEE IKQSLPSLEA ALRAQKCSLA ALGGHISRAV GPAAAVLKVF DAIHGLEKSL SSDPSSDLYG
101: YLVVVKRLEE ALRFLAENCG LAIRWLEDVV EFLKENAVTD DHRYLSNVTK SLKILRELQA NEECARLDGG LLSAAYDKLE TEYRRLLREN GVPLPIISSA
201: SSIVAPSSLP VFVIQKLQVI IERLSANNRL ENCLSTYIDI RSSNARACLE ALGLDYLEIS IFEFDNLQYM ESSLDMWSKH LEYSVKNLLE LEYQLCNDVF
301: EKVGLDVSMD CFAKIAIQSG FLAFIQFGNT VTESKKDAVK LFKLLKIFHT LNELRLDFNR LFGGKSCNEI QIPTRHLIKR VIDGACEIFW ELLPQVEVHR
401: GTSPPSNGSV PSLVSFVIDY CNQLLEDDYR LTMIQVLEIH QNWKHQKFQE ELLRKEVCNI VEAIRLNLDA WSKSYEDTPL SYIFLMNNHC HLYKALKGTS
501: LGDLIGDFQL REHKKYRDYY ASIYLRDSWG MLPGLLGHED ETLFSDGRAM ACSLVKKKLK TFNEALDGTY KKQSNWVLAN KNLRKRICQL VVDAIVPVYR
601: SYIQKYGHFI EQDGIKNVKI YTEEGLVNML SSMFQPKMGK CYSTNTRHSI DKKSEIVTSQ FPSTTVVA

Best Arabidopsis Sequence Match ( AT4G31540.1 )
(BLAST)

001: MMAESTGVDR GIQSLIAARK SLKLSLEKSK AIGLALGKTG PRFDEIEQRL PLLEAAVRPI RADGEALKDV GGNINRAVGP AAAVLKVFDA VHGLEKSLLS
101: DPKNDLSSYL SVLKRLEEAL KFLGENCGLA IQWLEDIVEY LDDHHVADEK YLSNLKKSLR GLSEFHNDRG GGEEKERSQL RLDGGLRNAA LDKLENEFRR
201: LLKDNSVPLP MASPSSLGDQ ACIAPSQLPV TVIHKLQAIL GRLRANNRLD KCISIYVEVR SLNVRASLQA LDLDYLDISV SEFNDVQSIE GYIAQWGNHL
301: EFAVKHLFEA EFKLCNDVFE RLGLNVWMDC FSKIAAQAGM LAFLQFGKTV TDSKKDPIKL LKLLDIFTSL NKLRADFNRL FGGAACIEIQ NFTRDLIKRI
401: IDGAAEIFWE LLVQVEIQKQ TPPPSDGGVP RLVSFVTDYC NKLIGDKYKS TLTQVLLIHK SWRSERFQDN QLMVEVLRII KAIEQNLDVW MKAYPDQTLA
501: HFFGMNNHWH LYKNLKGTNI GDHLGDSWLK EHDQYKEYYA TVFLRDSWGK LPSHLSREGL ILFSGGHATA RDLVKKRLKA FNDAFDEMYK KQASWVLPEK
601: DLRDRVCQQI VQAIVPVYRS YMQNYGPLVE KDASSSKYVR YTVVALEKIL SSLYMPKPMR YGSFKGTPPS EKFKNDVDLR RTTSAVV

Arabidopsis Description

ATEXO70G1EXO70-G1 protein [Source:UniProtKB/TrEMBL;Acc:Q7XYW9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.