Factsheet for GSMUA_Achr4P02260_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 6
cytosol 1
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P05660_001	Banana	cytosol, mitochondrion	83.41	83.28
GSMUA_Achr5P04880_001	Banana	mitochondrion	79.82	80.54
KRH04947	Soybean	cytosol, endoplasmic reticulum	65.02	65.12
KRH16141	Soybean	cytosol	64.42	64.42
PGSC0003DMT400075284	Potato	cytosol	63.98	63.79
Solyc12g096370.1.1	Tomato	cytosol	63.98	63.5
Os02t0149700-01	Rice	cytosol	52.32	62.95
Os06t0698600-01	Rice	mitochondrion	62.33	62.9
Solyc08g069100.1.1	Tomato	cytosol	61.73	61.64
Zm00001d014642_P001	Maize	cytosol	62.03	61.48
PGSC0003DMT400075972	Potato	cytosol	61.44	61.34
Bra011281.1-P	Field mustard	cytosol	60.99	60.27
CDY60850	Canola	cytosol	60.99	60.27
Bra010232.1-P	Field mustard	cytosol, plastid	42.9	60.04
TraesCS7B01G325400.1	Wheat	cytosol, plastid	60.54	59.82
CDX68762	Canola	cytosol	60.54	59.73
CDY23303	Canola	cytosol	60.39	59.67
CDY36434	Canola	cytosol	59.94	59.5
TraesCS7A01G424500.1	Wheat	cytosol, plastid	60.24	59.35
TraesCS6B01G148100.1	Wheat	cytosol	59.34	59.34
EES06277	Sorghum	cytosol	59.94	59.32
HORVU6Hr1G021690.1	Barley	cytosol	50.82	59.23
TraesCS7D01G417000.1	Wheat	cytosol, plastid	60.09	59.2
TraesCS6D01G109700.1	Wheat	cytosol	59.19	59.19
TraesCS6A01G119800.1	Wheat	cytosol	59.04	59.04
Zm00001d015277_P001	Maize	cytosol	59.04	58.96
EER88890	Sorghum	cytosol	60.09	58.94
HORVU7Hr1G098020.1	Barley	cytosol	60.09	58.86
AT4G31540.1	Thale cress	cytosol	60.24	58.66
Zm00001d000301_P001	Maize	cytosol	59.04	55.79
VIT_09s0018g02010.t01	Wine grape	cytosol	52.02	51.86
VIT_09s0018g02030.t01	Wine grape	cytosol	51.72	51.8
VIT_04s0008g02340.t01	Wine grape	plastid	65.02	49.21
KRH44635	Soybean	cytosol	44.54	44.28
KRH47016	Soybean	cytosol	44.25	44.18
CDY43917	Canola	cytosol	18.09	41.58
Solyc12g055770.1.1	Tomato	cytosol	40.21	41.01
PGSC0003DMT400074204	Potato	cytosol	40.06	40.85
CDY71325	Canola	cytosol	29.0	38.65
CDX87827	Canola	cytosol	35.58	38.64
AT1G51640.1	Thale cress	cytosol	37.67	38.18
CDY22856	Canola	cytosol	35.28	38.13
Bra018921.1-P	Field mustard	cytosol	35.28	38.13
Bra030432.1-P	Field mustard	cytosol	34.23	37.36
CDY55664	Canola	cytosol	32.29	36.12
CDY43918	Canola	cytosol	13.3	31.23
GSMUA_AchrUn_...	Banana	cytosol	25.11	24.49

Protein Annotations

EnsemblPlants:GSMUA_Achr4P02260_001	EnsemblPlants:GSMUA_Achr4T02260_001	EnsemblPlantsGene:GSMUA_Achr4G02260_001	Gene3D:1.20.1280.170	GO:GO:0000145	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150
GO:GO:0009987	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF23	PFAM:PF03081
SEG:seg	SUPFAM:SSF74788	UniParc:UPI00029514B3	UniProt:M0SKE3	MapMan:22.6.3.1	:

Description

ATEXO70G1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G02260_001]

Coordinates

chr4:+:2011328..2013832

Molecular Weight (calculated)

75494.3 Da

IEP (calculated)

8.202

GRAVY (calculated)

-0.169

Length

669 amino acids

Sequence
(BLAST)

001: MGGGWKVEKL VAVRRSLRTS LDRSRALGAA LARAGPRLDE IRQRLPPMEA AVRPIRADRD ALADAGGHID RSVVPAAAVL KVFDAVHGLE RSLLSDPRAD
101: LPGYLAVLKH LEEALRFLSD NCGLAVQWLD DIVDYLDDQT LADQRFIMGL KSFLVSLKSS PSPLDGGLLA ATLDKLESEF RLLLAEHTTP LPMPPDTSDA
201: STISTSPIPV LVINKLRAIL ERMTANNLLD RCVSIFVDVR GSNIRASLRA LNLDYLEITP NEFNDVQSIE GYIEKWGRHL QFAVKHLFET ELKVCVEVFE
301: QTGPPDVAVS CFADIAARAG ILGFLRFGTI VTETRKDPIK LLKLLDVFAT LNKLRLDFNR LFRGKDCVEI QNQTRDLIKR VIDGACDIFW ELLHQVELQR
401: QMPPPSDGAV PRLVSFITEY CNKLLSDEYR PVLTQVLIIH RSWKQEKFQE EMLTDAILEI FKALEANFDI WSKSYGDTSL SFLFAMNTHW HFYKNLKGTR
501: LGELLGEAKL KEHEQYKDYY AASFLRESWG KLPPLLSREG LILFSGGRVK ARDLVKQRLK GFNESFNEMY HKQLSWVISD KDLREKMCQL VVQTIVPSYR
601: SYMQNYGPLV EQDSSASKYA KYTAQSLEKM LGSLFQHKPG RTMSLSIGHS NGKLTSVMNN LSRSASTVS

Best Arabidopsis Sequence Match ( AT4G31540.1 )
(BLAST)

001: MMAESTGVDR GIQSLIAARK SLKLSLEKSK AIGLALGKTG PRFDEIEQRL PLLEAAVRPI RADGEALKDV GGNINRAVGP AAAVLKVFDA VHGLEKSLLS
101: DPKNDLSSYL SVLKRLEEAL KFLGENCGLA IQWLEDIVEY LDDHHVADEK YLSNLKKSLR GLSEFHNDRG GGEEKERSQL RLDGGLRNAA LDKLENEFRR
201: LLKDNSVPLP MASPSSLGDQ ACIAPSQLPV TVIHKLQAIL GRLRANNRLD KCISIYVEVR SLNVRASLQA LDLDYLDISV SEFNDVQSIE GYIAQWGNHL
301: EFAVKHLFEA EFKLCNDVFE RLGLNVWMDC FSKIAAQAGM LAFLQFGKTV TDSKKDPIKL LKLLDIFTSL NKLRADFNRL FGGAACIEIQ NFTRDLIKRI
401: IDGAAEIFWE LLVQVEIQKQ TPPPSDGGVP RLVSFVTDYC NKLIGDKYKS TLTQVLLIHK SWRSERFQDN QLMVEVLRII KAIEQNLDVW MKAYPDQTLA
501: HFFGMNNHWH LYKNLKGTNI GDHLGDSWLK EHDQYKEYYA TVFLRDSWGK LPSHLSREGL ILFSGGHATA RDLVKKRLKA FNDAFDEMYK KQASWVLPEK
601: DLRDRVCQQI VQAIVPVYRS YMQNYGPLVE KDASSSKYVR YTVVALEKIL SSLYMPKPMR YGSFKGTPPS EKFKNDVDLR RTTSAVV

Arabidopsis Description

ATEXO70G1EXO70-G1 protein [Source:UniProtKB/TrEMBL;Acc:Q7XYW9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.