CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23303	Canola	cytosol	97.18	96.75
Bra010232.1-P	Field mustard	cytosol, plastid	68.25	96.23
CDY60850	Canola	cytosol	91.25	90.84
CDX68762	Canola	cytosol	90.8	90.27
AT4G31540.1	Thale cress	cytosol	85.01	83.41
KRH04947	Soybean	cytosol, endoplasmic reticulum	72.7	73.35
KRH16141	Soybean	cytosol	71.96	72.5
Solyc08g069100.1.1	Tomato	cytosol	67.66	68.06
PGSC0003DMT400075284	Potato	cytosol	67.51	67.81
Solyc12g096370.1.1	Tomato	cytosol	67.8	67.8
PGSC0003DMT400075972	Potato	cytosol	67.21	67.61
GSMUA_Achr3P05660_001	Banana	cytosol, mitochondrion	63.95	64.33
GSMUA_Achr5P04880_001	Banana	mitochondrion	62.46	63.5
GSMUA_Achr4P02260_001	Banana	mitochondrion	59.5	59.94
Os02t0149700-01	Rice	cytosol	45.55	55.22
Os06t0698600-01	Rice	mitochondrion	54.3	55.2
VIT_04s0008g02340.t01	Wine grape	plastid	72.11	54.98
EES06277	Sorghum	cytosol	54.01	53.85
TraesCS7B01G325400.1	Wheat	cytosol, plastid	53.71	53.47
Zm00001d015277_P001	Maize	cytosol	53.12	53.43
Zm00001d014642_P001	Maize	cytosol	53.41	53.33
TraesCS7D01G417000.1	Wheat	cytosol, plastid	53.26	52.87
HORVU7Hr1G098020.1	Barley	cytosol	53.56	52.86
TraesCS7A01G424500.1	Wheat	cytosol, plastid	53.12	52.72
TraesCS6A01G119800.1	Wheat	cytosol	51.63	52.02
HORVU6Hr1G021690.1	Barley	cytosol	44.21	51.92
TraesCS6B01G148100.1	Wheat	cytosol	51.48	51.87
TraesCS6D01G109700.1	Wheat	cytosol	51.48	51.87
EER88890	Sorghum	cytosol	52.37	51.76
Zm00001d000301_P001	Maize	cytosol	53.71	51.13
CDX87827	Canola	cytosol	35.76	39.12
CDY71325	Canola	cytosol	28.93	38.84
CDY22856	Canola	cytosol	34.57	37.64
CDY43917	Canola	cytosol	16.17	37.46
CDY55664	Canola	cytosol	31.9	35.95
CDY43918	Canola	cytosol	14.84	35.09

Protein Annotations

Gene3D:1.20.1280.170	MapMan:22.6.3.1	GO:A0A078HG97	UniProt:A0A078HG97	EnsemblPlants:CDY36434	ProteinID:CDY36434
ProteinID:CDY36434.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00062063001	PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF43	SUPFAM:SSF74788	UniParc:UPI0004EF14A4
SEG:seg	:	:	:	:	:

Description

BnaC03g67540DBnaC03g67540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HG97]

Coordinates

chrLK032376:+:16748..19072

Molecular Weight (calculated)

76394.3 Da

IEP (calculated)

8.486

GRAVY (calculated)

-0.239

Length

674 amino acids

Sequence
(BLAST)

001: MAEPAMVDRG IQSLIAATNH LKSSLEKSKA IGLALERTSP RFDEIEQRLP SLEAAVRPIR ADREALVAVG GHINRAVGPA AAVLKVLDAV HGLEKSLLSD
101: PKNDLSGYLA VLKRLEEALR FLGENCGLAI QWLEDIVEYL EDHSVADEKY LSNLKKSLKG LREFQQEKAR LDGGLRDAAL DKLENEFRRL LKDNSVPLPM
201: APPLGEQACI APPQLPVTVI HKLQAVLGRL RANNRLEMCV SIYVEVRSSN VRASLQALDL DYLDISVTEF NDVQSIEGYI SQWGNHLEFA VKHLFEAEFK
301: LCGDVFERFG SNVWLDCFSK IAAQAGMLAF LQFGKTVTDS KKDPIKLLKL LDIFTSLNKL RGDFNRLFGG AACVEIQSFT RDIIKKLIDG AAEIFWELLV
401: QVEIQKQIQP PSDGGVPRLV SFVTDYCNKL VGDKYKSTLS QVLLIQKSWR SERFQENQLT VEILRIIKMI EQNMEAWMKA YPDQTLAHFF GMNNHYHLYK
501: SLKGTRIGDQ LGDSWLKEHD QYKEYYATVF LRDTWGKLPT HLSREGLILF SGGHATARDL VKKRLKSFND AFDEMYKKQS TWVVPEKDLR ERVCQQIVQA
601: VVPVYRSYMQ NYGPLVEKDA SSSKYVRYTV VALEKILSSL YIPRPMRYGS FKGTPPSEKL RNDVDLRRTT SAVV

Best Arabidopsis Sequence Match ( AT4G31540.1 )
(BLAST)

001: MMAESTGVDR GIQSLIAARK SLKLSLEKSK AIGLALGKTG PRFDEIEQRL PLLEAAVRPI RADGEALKDV GGNINRAVGP AAAVLKVFDA VHGLEKSLLS
101: DPKNDLSSYL SVLKRLEEAL KFLGENCGLA IQWLEDIVEY LDDHHVADEK YLSNLKKSLR GLSEFHNDRG GGEEKERSQL RLDGGLRNAA LDKLENEFRR
201: LLKDNSVPLP MASPSSLGDQ ACIAPSQLPV TVIHKLQAIL GRLRANNRLD KCISIYVEVR SLNVRASLQA LDLDYLDISV SEFNDVQSIE GYIAQWGNHL
301: EFAVKHLFEA EFKLCNDVFE RLGLNVWMDC FSKIAAQAGM LAFLQFGKTV TDSKKDPIKL LKLLDIFTSL NKLRADFNRL FGGAACIEIQ NFTRDLIKRI
401: IDGAAEIFWE LLVQVEIQKQ TPPPSDGGVP RLVSFVTDYC NKLIGDKYKS TLTQVLLIHK SWRSERFQDN QLMVEVLRII KAIEQNLDVW MKAYPDQTLA
501: HFFGMNNHWH LYKNLKGTNI GDHLGDSWLK EHDQYKEYYA TVFLRDSWGK LPSHLSREGL ILFSGGHATA RDLVKKRLKA FNDAFDEMYK KQASWVLPEK
601: DLRDRVCQQI VQAIVPVYRS YMQNYGPLVE KDASSSKYVR YTVVALEKIL SSLYMPKPMR YGSFKGTPPS EKFKNDVDLR RTTSAVV

Arabidopsis Description

ATEXO70G1EXO70-G1 protein [Source:UniProtKB/TrEMBL;Acc:Q7XYW9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.