Factsheet for GSMUA_Achr5P04880_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P05660_001	Banana	cytosol, mitochondrion	88.39	87.46
GSMUA_Achr4P02260_001	Banana	mitochondrion	80.54	79.82
KRH04947	Soybean	cytosol, endoplasmic reticulum	66.52	66.02
Solyc12g096370.1.1	Tomato	cytosol	66.52	65.43
PGSC0003DMT400075284	Potato	cytosol	66.21	65.42
KRH16141	Soybean	cytosol	65.76	65.17
Solyc08g069100.1.1	Tomato	cytosol	64.4	63.73
Bra011281.1-P	Field mustard	cytosol	65.01	63.66
CDY60850	Canola	cytosol	64.86	63.52
CDX68762	Canola	cytosol	64.86	63.42
PGSC0003DMT400075972	Potato	cytosol	63.5	62.84
CDY23303	Canola	cytosol	63.8	62.48
CDY36434	Canola	cytosol	63.5	62.46
Bra010232.1-P	Field mustard	cytosol, plastid	44.95	62.34
Os06t0698600-01	Rice	mitochondrion	61.84	61.84
Os02t0149700-01	Rice	cytosol	51.58	61.51
AT4G31540.1	Thale cress	cytosol	63.5	61.28
Zm00001d014642_P001	Maize	cytosol	61.09	60.0
EES06277	Sorghum	cytosol	60.33	59.17
TraesCS7B01G325400.1	Wheat	cytosol, plastid	59.88	58.64
TraesCS7A01G424500.1	Wheat	cytosol, plastid	59.73	58.32
EER88890	Sorghum	cytosol	59.88	58.21
Zm00001d015277_P001	Maize	cytosol	58.82	58.21
TraesCS7D01G417000.1	Wheat	cytosol, plastid	59.58	58.17
TraesCS6D01G109700.1	Wheat	cytosol	58.52	58.0
TraesCS6B01G148100.1	Wheat	cytosol	58.52	58.0
TraesCS6A01G119800.1	Wheat	cytosol	58.52	58.0
HORVU7Hr1G098020.1	Barley	cytosol	59.58	57.83
HORVU6Hr1G021690.1	Barley	cytosol	49.92	57.67
Zm00001d000301_P001	Maize	cytosol	59.58	55.79
VIT_09s0018g02010.t01	Wine grape	cytosol	54.75	54.1
VIT_09s0018g02030.t01	Wine grape	cytosol	54.3	53.89
VIT_04s0008g02340.t01	Wine grape	plastid	67.42	50.57
KRH47016	Soybean	cytosol	46.76	46.27
KRH44635	Soybean	cytosol	46.61	45.91
PGSC0003DMT400074204	Potato	cytosol	42.38	42.84
Solyc12g055770.1.1	Tomato	cytosol	42.08	42.53
CDY43917	Canola	cytosol	17.8	40.55
CDX87827	Canola	cytosol	37.41	40.26
AT1G51640.1	Thale cress	cytosol	39.37	39.55
Bra018921.1-P	Field mustard	cytosol	36.35	38.93
CDY22856	Canola	cytosol	36.05	38.61
CDY71325	Canola	cytosol	29.11	38.45
Bra030432.1-P	Field mustard	cytosol	35.44	38.34
CDY55664	Canola	cytosol	33.18	36.79
CDY43918	Canola	cytosol	14.03	32.63
GSMUA_AchrUn_...	Banana	cytosol	26.09	25.22

Protein Annotations

EnsemblPlants:GSMUA_Achr5P04880_001	EnsemblPlants:GSMUA_Achr5T04880_001	EnsemblPlantsGene:GSMUA_Achr5G04880_001	Gene3D:1.20.1280.170	GO:GO:0000145	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150
GO:GO:0009987	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF23	PFAM:PF03081
SEG:seg	SUPFAM:SSF74788	UniParc:UPI000294BC85	UniProt:M0SVR7	MapMan:22.6.3.1	:

Description

ATEXO70G1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G04880_001]

Coordinates

chr5:+:3583166..3587692

Molecular Weight (calculated)

74773.5 Da

IEP (calculated)

8.818

GRAVY (calculated)

-0.141

Length

663 amino acids

Sequence
(BLAST)

001: MDSLVTARRT LVVSLEKSRT LGTALARAGP RLDEIRQRLP SLEAAVRPIR ADRGKLAAAG GHIDRAVGPA AAVLKVFDAV HGLERSLLAD LRADLFGYLS
101: VLKRLEEALR FLSENCGLAV QWLDDIVEYL DDHSLADPRF IEALKASLDS VKPSPSALDG GLLVAALDKL ESQFRRLLAD HTVPLQMPSD IVGVPAIAPS
201: PIPVSVINKL RAILERTTAN DRLDRCISIY VDVRGSNVRA SLRALDLEYL EITPAEFNGV QSIEGYIQKW CRHLEFAIKH LFEAEFKVCI EVFERAGPRD
301: VALSCFAEIA AHAGMLAFLR FGKTVTETRK DPIKLLKLLD IFATLNRLRL DFNRIFGGKA CAEIQNQTRD LIKRVIDGAC EIFWELLHQV ELQRQMPPPS
401: DGAVPKLVSF VTDYCNKLLS EEHLPVLTQV LIINRSWKQE KFQERLLTDA ILDIFKALEA NFETWSKSYE DIPLSYLFAM NTHWHFYKNL KGTKLGELLG
501: EAKLKEHEQY KDYYATYFLR ESWGKLPSLL SREGLILFSG GRSKARDLVK QRLKAFNKSF DEMYQKQSTW VISDKELREK LCHSIVQTIV PSYRSYMQNY
601: GPLVEQDASA SKYAKYTAQS LENMLGSLFL HKPGRTMSLN IRHSNGKLNS VMTSVSRSAS TVS

Best Arabidopsis Sequence Match ( AT4G31540.1 )
(BLAST)

001: MMAESTGVDR GIQSLIAARK SLKLSLEKSK AIGLALGKTG PRFDEIEQRL PLLEAAVRPI RADGEALKDV GGNINRAVGP AAAVLKVFDA VHGLEKSLLS
101: DPKNDLSSYL SVLKRLEEAL KFLGENCGLA IQWLEDIVEY LDDHHVADEK YLSNLKKSLR GLSEFHNDRG GGEEKERSQL RLDGGLRNAA LDKLENEFRR
201: LLKDNSVPLP MASPSSLGDQ ACIAPSQLPV TVIHKLQAIL GRLRANNRLD KCISIYVEVR SLNVRASLQA LDLDYLDISV SEFNDVQSIE GYIAQWGNHL
301: EFAVKHLFEA EFKLCNDVFE RLGLNVWMDC FSKIAAQAGM LAFLQFGKTV TDSKKDPIKL LKLLDIFTSL NKLRADFNRL FGGAACIEIQ NFTRDLIKRI
401: IDGAAEIFWE LLVQVEIQKQ TPPPSDGGVP RLVSFVTDYC NKLIGDKYKS TLTQVLLIHK SWRSERFQDN QLMVEVLRII KAIEQNLDVW MKAYPDQTLA
501: HFFGMNNHWH LYKNLKGTNI GDHLGDSWLK EHDQYKEYYA TVFLRDSWGK LPSHLSREGL ILFSGGHATA RDLVKKRLKA FNDAFDEMYK KQASWVLPEK
601: DLRDRVCQQI VQAIVPVYRS YMQNYGPLVE KDASSSKYVR YTVVALEKIL SSLYMPKPMR YGSFKGTPPS EKFKNDVDLR RTTSAVV

Arabidopsis Description

ATEXO70G1EXO70-G1 protein [Source:UniProtKB/TrEMBL;Acc:Q7XYW9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.