CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43917	Canola	cytosol	45.94	97.25
CDY43918	Canola	cytosol	39.29	84.91
CDY71325	Canola	cytosol	62.34	76.49
AT1G51640.1	Thale cress	cytosol	81.49	76.06
CDY22856	Canola	cytosol	75.32	74.96
CDY55664	Canola	cytosol	71.43	73.58
GSMUA_Achr3P05660_001	Banana	cytosol, mitochondrion	41.4	38.06
VIT_09s0018g02030.t01	Wine grape	cytosol	41.07	37.87
VIT_09s0018g02010.t01	Wine grape	cytosol	40.75	37.41
GSMUA_Achr5P04880_001	Banana	mitochondrion	40.26	37.41
CDX68762	Canola	cytosol	40.42	36.73
CDY60850	Canola	cytosol	40.1	36.48
KRH47016	Soybean	cytosol	39.29	36.12
CDY36434	Canola	cytosol	39.12	35.76
CDY23303	Canola	cytosol	39.12	35.6
GSMUA_Achr4P02260_001	Banana	mitochondrion	38.64	35.58
KRH44635	Soybean	cytosol	37.99	34.77
Solyc12g055770.1.1	Tomato	cytosol	35.55	33.38
Os06t0698600-01	Rice	mitochondrion	35.06	32.58
PGSC0003DMT400074204	Potato	cytosol	34.58	32.47
HORVU6Hr1G021690.1	Barley	cytosol	30.03	32.23
Zm00001d015277_P001	Maize	cytosol	34.9	32.09
TraesCS6B01G148100.1	Wheat	cytosol	34.58	31.84
TraesCS6D01G109700.1	Wheat	cytosol	34.58	31.84
Os02t0149700-01	Rice	cytosol	28.73	31.83
TraesCS6A01G119800.1	Wheat	cytosol	34.42	31.69
Zm00001d014642_P001	Maize	cytosol	34.42	31.41
TraesCS7A01G424500.1	Wheat	cytosol, plastid	34.25	31.08
TraesCS7B01G325400.1	Wheat	cytosol, plastid	34.09	31.02
TraesCS7D01G417000.1	Wheat	cytosol, plastid	34.09	30.93
EES06277	Sorghum	cytosol	33.77	30.77
HORVU7Hr1G098020.1	Barley	cytosol	33.77	30.45
EER88890	Sorghum	cytosol	33.6	30.35
Zm00001d000301_P001	Maize	cytosol	34.58	30.08

Protein Annotations

Gene3D:1.20.1280.170	MapMan:22.6.3.1	GO:A0A078DFN5	EnsemblPlants:CDX87827	ProteinID:CDX87827	ProteinID:CDX87827.1
ncoils:Coil	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00146986001	PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF43	SUPFAM:SSF74788	UniParc:UPI0004EEBBB9
SEG:seg	:	:	:	:	:

Description

BnaC06g08890D

Coordinates

chrLK031852:-:397662..399584

Molecular Weight (calculated)

71683.7 Da

IEP (calculated)

6.522

GRAVY (calculated)

-0.365

Length

616 amino acids

Sequence
(BLAST)

001: MSLERLKAMR SLLKSEMEKS ETFSLVLEKI GTKLEEINTN LLSLEADVKV ERWRSSPFSD HIRHTIAPIS AVLRVFVTVQ ELERSLLSCK DVLGYVSDVK
101: RLEEALKLLS SSCVLALDWL KDTIQFLSEH GMPEDHPCGL RFKTSIKLLE ELQMTEARAY LRGGSLYIAL ENLETEFERI LEDEEVLSES NMRKLKTIIK
201: RLDAHCVPSY IKIRTRVIQK RFENGYLHKT ITEDDNVQDT EGDIDQWRLD MEKALKEIYE FESKLCYEVF EDVGEEHDVP LRCFGAIASN SGLLQLLRFG
301: SRISKCKKSP PKLLKLLDCF STMDNIRTEF NRLFKGELCS DIRRETRELI SNLVNGVCEI FWELPCQVEL QRPNNPPLDG GVPKLVSVVT EYCNKLLGDK
401: NKPVLSKILE IDLGWKKEKY QEEILIGHIY NILREIALNL DAWSSSNKET ALSYIFMMNN HSHFYYYAAL YVKESWGKLL SLLTIKSQPA RRKRARESIK
501: RTLQDFANGF DEIYTKQSDW VVEDERLRWK ICQAMVRTVV PRYKSYLQSY IMLLVEEDPM RPGNDLSYTP KGLEMKLKTM FQSKEETEKT YKCSHFVNKV
601: MDLEVTQNSH LTFEAI

Best Arabidopsis Sequence Match ( AT1G51640.1 )
(BLAST)

001: MAESKRLERL KAMRSLLKSE MEKSETFSLV LNKTGSKIEE INHKLSSLEA DLKVERWKAS PFSDHIRHTI APISAVLRVF ATVQELERSL VSSDGVLGYV
101: SDVKRLGEAM KLLSSSCVLA LNWLEDTIEY LTEKGMPEDH PCGLRFKTSI ELLRELQMTE SRAYLKGGIL YTALKNLETE FKRILQEKPV FSEDNLRKLQ
201: AIIKRLHAHT RLTSCVPVYI KVRTKVIQKR FEISYLEKTI TEADNVHDIE GDIDQWRLHM EIAVKEIYEF ESKLCYDVFE DIGEDVPLRC FGEIASNSVI
301: LQLLRFGSRI SKCKREPPKL IKLLDCFSTM DNFRIEFNRL FRGEQCSEIR RVTRELISNL VKGVSEIFWE LPCQVELQRP NCPPLDGGVP KLVSVVTEYC
401: NKLLGNNNKP ILSKVLEIDL GWKNAKYQEE LLTGHIYNIL REIALNLDAW SSSNKETALS CIFMMNNHSH FCGLRETYLG EMMGESWLNA HEQYRDYYAA
501: LYVKESWGHL LSLLTNKAQT TSSSSSSSSE SSPVKGKRAR ESIKRTLQAF CKGFDEIYTK QSNWVVEDDK LVWKICQAMV KTVVPRYKSY LQSYIKLLVE
601: EDPTSDSKHL YYTPKGLEMK LKTMFQKKEE TEKRDKDSHF VNKVMDLEIT QNSRSTLEAI

Arabidopsis Description

ATEXO70G2Exocyst subunit exo70 family protein G2 [Source:UniProtKB/TrEMBL;Acc:Q9C8H6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.