Factsheet for Solyc02g094370.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052043	Potato	nucleus	92.72	94.84
Bra023443.1-P	Field mustard	cytosol	34.59	56.65
Os12t0165600-01	Rice	cytosol, plasma membrane	35.01	51.12
KRH06895	Soybean	cytosol	47.34	47.41
KRG94595	Soybean	nucleus	47.06	47.26
KRH70050	Soybean	nucleus	46.64	46.97
Solyc05g024340.1.1	Tomato	cytosol	38.52	46.45
GSMUA_Achr6P07200_001	Banana	nucleus	42.72	46.14
Bra008789.1-P	Field mustard	cytosol, nucleus, plastid	43.98	45.97
CDX69615	Canola	cytosol, nucleus, plastid	43.98	45.84
CDY09840	Canola	cytosol, nucleus, plastid	43.84	45.63
Solyc01g009880.2.1	Tomato	nucleus	41.74	44.88
AT5G13990.1	Thale cress	nucleus	43.28	44.46
TraesCS5B01G122500.1	Wheat	plastid	41.18	44.41
Bra006228.1-P	Field mustard	nucleus	42.02	44.05
CDX78551	Canola	nucleus	41.88	43.91
CDX70532	Canola	nucleus	41.88	43.84
CDX85618	Canola	nucleus	42.86	43.84
EES08037	Sorghum	cytosol, plastid	41.32	42.94
Zm00001d023513_P001	Maize	plastid	41.04	42.9
Zm00001d053192_P001	Maize	cytosol, plastid	40.76	42.61
Zm00001d004846_P001	Maize	cytosol, plastid	40.76	42.54
Zm00001d041908_P001	Maize	plastid	40.34	42.54
EES16704	Sorghum	plastid	41.18	42.12
Os11t0167600-00	Rice	plasma membrane	40.76	42.05
TraesCS4B01G112100.1	Wheat	cytosol	40.06	40.28
TraesCS5D01G130800.1	Wheat	plastid	40.62	40.28
HORVU4Hr1G020050.1	Barley	cytosol, plastid	39.92	40.25
GSMUA_Achr6P25750_001	Banana	endoplasmic reticulum	39.36	40.09
TraesCS4D01G109600.1	Wheat	cytosol	39.36	39.58
TraesCS4A01G208500.1	Wheat	cytosol	39.08	39.41
TraesCS5A01G122400.1	Wheat	mitochondrion	40.62	39.24
GSMUA_Achr6P18090_001	Banana	nucleus	25.07	38.83
CDX91088	Canola	cytosol, nucleus, vacuole	41.6	38.47
Solyc08g066070.1.1	Tomato	cytosol	29.97	33.91
Solyc06g062990.1.1	Tomato	cytosol	28.01	33.56
Solyc03g122240.2.1	Tomato	nucleus	27.45	33.45
HORVU5Hr1G039240.1	Barley	plastid	34.03	33.38
Solyc03g111320.1.1	Tomato	cytosol	29.69	31.88
Solyc03g115070.1.1	Tomato	cytosol	24.23	27.24
Solyc11g006620.1.1	Tomato	cytosol	24.79	26.9
Solyc10g081940.1.1	Tomato	cytosol	24.09	26.88
Solyc04g009740.2.1	Tomato	nucleus	24.37	26.73
Solyc02g088800.1.1	Tomato	nucleus	24.51	26.56
Solyc06g005280.1.1	Tomato	plastid	21.43	25.59
Solyc11g073010.1.1	Tomato	plastid	22.41	25.24
Solyc09g005840.1.1	Tomato	plastid	21.71	24.37
Solyc05g054820.1.1	Tomato	plastid	21.29	23.57
Solyc09g005830.1.1	Tomato	plastid	20.87	23.35
Solyc06g075610.1.1	Tomato	plastid	19.89	22.79
GSMUA_Achr10P...	Banana	cytosol	24.23	22.24

Protein Annotations

MapMan:22.6.3.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000003	GO:GO:0000145	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006810
GO:GO:0006887	GO:GO:0008150	GO:GO:0009653	GO:GO:0009856	GO:GO:0009987	GO:GO:0016043
GO:GO:0016049	GO:GO:0030154	GO:GO:0040007	GO:GO:0080092	GO:GO:0090406	UniProt:K4BDN2
PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF15	SUPFAM:SSF74788	EnsemblPlantsGene:Solyc02g094370.1	EnsemblPlants:Solyc02g094370.1.1
UniParc:UPI0002768AB1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:-:54918659..54920803

Molecular Weight (calculated)

81441.5 Da

IEP (calculated)

4.485

GRAVY (calculated)

-0.731

Length

714 amino acids

Sequence
(BLAST)

001: MDLTQTSSDQ TKSNDKQPDE TPPAHETKST EEEIVEQLQT DDRVINTTED DGAKTDDIKP EDDDEVKVEV SSPLPPDLDK VSEEIDQFIS ESSNFKGDDD
101: ESKPPDVPVF VEQFAVLVEA KIDEYDGGDA PVKWSQLAQE EATSFLNIVD RISKLFTSLC RFSSEYKYAY SISRVDGVLQ RAMSYIEEEY KSILYDYKIN
201: TDSDITNLDT SSAKPNPNSS SSDTNEDAEQ DTASESKPSE ENKFPGYSEE IVATLNKFSK ALIAGGYEAE CCQVYFIARR KALEESLHKL GFEKYSIEDV
301: QKMNWEPLER EVTAWIATFR HCTNVLFSSE RKLADAVFED QPSISETIFS NLSRGMMIQL LNFAEAVSMT KRAAEKLFKF LDIYETLRDF IPLVDKIFPV
401: SYADELKAEA TLSRGRLGES MVSIFSELEN SIQGDSNKTA VPGGAVHPLT RYIMNYLKYV GEYRDTLEQV FREHQMIERA DSATGSDFDC QNPQAGQSSN
501: NNNNNNNNHN NNNTSSNKPS PFETHMIKVM DLLDSNLEGK SRLYKDTSLS SIFMMNNGRY ILQKIKGSPE MNSLMGDQWY RKRSSDLRQY HKNYQRETWG
601: KLLQCLNHEG LNVNGKVNKP ILKERFKSFN ALFDEIHKTQ SSWVISDEQL QSELRVSISN MVIPAYRSFL GRFSQTFTPG RQTEKYVKYQ PEEIETDIDE
701: LFDGNTTPWG RKKL

Best Arabidopsis Sequence Match ( AT5G13990.1 )
(BLAST)

001: MEKNDKDPDH DDKSKGDEKG DVVSDAHPSD DAHHQDGISN ENVDVVGNAE TDHQDPGDNN VDKVSQGEEA PEIRQTLESL SEELDQFLPT LSLHMEEHKD
101: STEEKGEDGY FQIPQFVGKF LDLFEEKLSK YDSGEPKTVW YQDPEEVSSL LEAVDRVSKL MGLLLNTKSC LDHHESLINH AGSIQQRAMA FLEDEFRIIL
201: EESVTKESVV VTDDSNSQRR STADQQDHQN DVVVSQDHDQ MLVPECGDQE IEYPGYPEDV VVVLRKIAEK MKAGGYGWEC REVYLVGRRN ILMRTLKQDC
301: EFEKVSIDEV QKMSWDTLER EIPIWNKTFK DCSSLFFPGE LKLAERIFPG DEGNLFCIVT HGLAIQFLGF AEAVAMTRRS TEKLFKILDI YETLRDSFPA
401: MEELFPEELR SELRNEVTSA RSRLGETAIH IFCDLEHSIK SDSSKTPVPG GAVHPLTRYT MNYLKYSCEY KDTLEQVFKS HSKMEREEEE PVESGNSAFA
501: SQLMRIMELL DGNLETKSKQ YKDIPLSCIF MMNNGRYIVQ KIKGSAEIHE VMGDTWCRRR SSELRNYHKN YQRETWGKLL GFLGHEGLMH NGKIVKPNLK
601: ERFKSFNATF DEIHKTQTTW VVNDEQLQSE LRVSITAVMI PAYRAFMARF GQYLDPGRQT EKYVKYQPED IEDLIDQLFE GNTSSSSTAT ARRRT

Arabidopsis Description

ATEXO70C2EXO70C2 [Source:UniProtKB/TrEMBL;Acc:A0A178UPG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.