Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008789.1-P | Field mustard | cytosol, nucleus, plastid | 98.54 | 98.83 |
| CDY09840 | Canola | cytosol, nucleus, plastid | 97.08 | 96.94 |
| AT5G13990.1 | Thale cress | nucleus | 86.57 | 85.32 |
| CDX85618 | Canola | nucleus | 84.96 | 83.38 |
| CDX70532 | Canola | nucleus | 82.19 | 82.55 |
| CDX78551 | Canola | nucleus | 82.04 | 82.53 |
| CDX91088 | Canola | cytosol, nucleus, vacuole | 82.19 | 72.93 |
| CDX69666 | Canola | cytosol | 18.1 | 65.61 |
| CDX97230 | Canola | cytosol | 17.96 | 65.08 |
| Os12t0165600-01 | Rice | cytosol, plasma membrane | 34.01 | 47.65 |
| KRH70050 | Soybean | nucleus | 48.47 | 46.83 |
| KRH06895 | Soybean | cytosol | 47.59 | 45.72 |
| PGSC0003DMT400052043 | Potato | nucleus | 45.99 | 45.13 |
| KRG94595 | Soybean | nucleus | 46.28 | 44.59 |
| CDY69943 | Canola | cytosol | 40.73 | 44.5 |
| CDX78509 | Canola | nucleus | 40.58 | 44.34 |
| Solyc02g094370.1.1 | Tomato | cytosol | 45.84 | 43.98 |
| CDY02822 | Canola | cytosol | 18.39 | 43.75 |
| GSMUA_Achr6P07200_001 | Banana | nucleus | 42.04 | 43.57 |
| GSMUA_Achr6P25750_001 | Banana | endoplasmic reticulum | 42.63 | 41.65 |
| CDY02484 | Canola | cytosol | 18.25 | 41.39 |
| CDY28574 | Canola | cytosol | 16.2 | 41.11 |
| TraesCS5B01G122500.1 | Wheat | plastid | 38.69 | 40.03 |
| Zm00001d023513_P001 | Maize | plastid | 39.42 | 39.53 |
| TraesCS4B01G112100.1 | Wheat | cytosol | 40.88 | 39.44 |
| Zm00001d053192_P001 | Maize | cytosol, plastid | 38.69 | 38.8 |
| Zm00001d004846_P001 | Maize | cytosol, plastid | 38.69 | 38.74 |
| Os11t0167600-00 | Rice | plasma membrane | 39.12 | 38.73 |
| EES16704 | Sorghum | plastid | 39.42 | 38.68 |
| TraesCS4D01G109600.1 | Wheat | cytosol | 39.85 | 38.45 |
| TraesCS4A01G208500.1 | Wheat | cytosol | 39.56 | 38.28 |
| HORVU4Hr1G020050.1 | Barley | cytosol, plastid | 39.56 | 38.28 |
| Zm00001d041908_P001 | Maize | plastid | 37.66 | 38.11 |
| EES08037 | Sorghum | cytosol, plastid | 38.1 | 37.99 |
| TraesCS5D01G130800.1 | Wheat | plastid | 38.25 | 36.39 |
| GSMUA_Achr6P18090_001 | Banana | nucleus | 24.38 | 36.23 |
| TraesCS5A01G122400.1 | Wheat | mitochondrion | 38.98 | 36.13 |
| CDY60022 | Canola | cytosol | 30.51 | 33.82 |
| CDY10372 | Canola | cytosol | 14.31 | 32.67 |
| CDY60968 | Canola | cytosol | 4.82 | 31.43 |
| CDY61474 | Canola | cytosol | 22.92 | 30.91 |
| CDY50639 | Canola | cytosol | 27.45 | 30.87 |
| CDX68265 | Canola | cytosol | 27.45 | 30.87 |
| CDY06667 | Canola | cytosol | 26.42 | 30.32 |
| CDX70300 | Canola | cytosol | 27.88 | 30.22 |
| CDY10374 | Canola | cytosol | 28.03 | 30.09 |
| CDY04082 | Canola | cytosol | 25.11 | 30.02 |
| CDY70944 | Canola | cytosol | 18.54 | 29.95 |
| HORVU5Hr1G039240.1 | Barley | plastid | 31.82 | 29.95 |
| CDY44387 | Canola | cytosol | 24.96 | 29.9 |
| CDY10240 | Canola | cytosol | 25.84 | 29.65 |
| CDX97543 | Canola | cytoskeleton, cytosol, nucleus | 26.28 | 29.13 |
| CDY44373 | Canola | cytosol | 23.5 | 28.6 |
| CDY27076 | Canola | cytosol | 25.84 | 28.01 |
| CDX91635 | Canola | cytosol | 25.84 | 28.01 |
| CDY05812 | Canola | cytosol, plastid | 27.3 | 27.91 |
| CDY52262 | Canola | cytoskeleton, cytosol, nucleus | 26.28 | 27.86 |
| CDX71629 | Canola | cytosol | 27.15 | 27.84 |
| CDX86365 | Canola | cytosol | 26.13 | 27.67 |
| CDY02176 | Canola | cytosol | 21.9 | 27.27 |
| CDX93621 | Canola | cytosol | 17.81 | 27.17 |
| CDX85273 | Canola | cytosol | 25.26 | 26.62 |
| CDX71078 | Canola | cytosol, mitochondrion, nucleus, plastid | 21.02 | 25.95 |
| CDX88720 | Canola | plastid | 20.73 | 25.82 |
| CDY68540 | Canola | plastid | 20.58 | 25.73 |
| CDY60562 | Canola | cytosol | 20.73 | 25.68 |
| CDY49576 | Canola | cytosol | 20.15 | 25.05 |
| CDY04577 | Canola | plastid | 18.98 | 23.94 |
| CDY07003 | Canola | cytosol, golgi, mitochondrion, plastid | 13.72 | 23.74 |
| CDX95128 | Canola | cytosol, nucleus, plastid | 20.0 | 23.58 |
| CDY44645 | Canola | plastid | 21.9 | 23.29 |
| CDX93267 | Canola | plastid | 20.15 | 23.0 |
| CDX74849 | Canola | plastid | 20.88 | 22.73 |
| CDY64627 | Canola | plastid | 21.31 | 22.6 |
| CDY44712 | Canola | cytosol | 20.0 | 22.31 |
| CDX74848 | Canola | plastid | 19.85 | 22.3 |
| CDY31722 | Canola | mitochondrion, plastid | 18.83 | 22.16 |
| CDY40204 | Canola | plastid | 20.15 | 22.12 |
| GSMUA_Achr10P... | Banana | cytosol | 25.11 | 22.11 |
| CDX80235 | Canola | cytosol, nucleus, plastid | 20.15 | 22.04 |
| CDX73983 | Canola | mitochondrion | 19.85 | 21.94 |
| CDX73400 | Canola | plastid | 20.0 | 21.85 |
| CDY41604 | Canola | cytosol | 19.71 | 21.81 |
| CDX76117 | Canola | plastid | 20.15 | 21.8 |
| CDY64629 | Canola | plastid | 20.44 | 21.77 |
| CDX77195 | Canola | mitochondrion, plastid | 18.54 | 21.75 |
| CDY41297 | Canola | mitochondrion | 19.27 | 21.71 |
| CDY02823 | Canola | cytosol | 7.88 | 21.69 |
| CDY07931 | Canola | cytosol | 19.71 | 21.57 |
| CDX74850 | Canola | plastid | 21.17 | 21.51 |
| CDY02916 | Canola | plastid | 19.85 | 21.48 |
| CDY60967 | Canola | plastid | 11.97 | 21.41 |
| CDY44646 | Canola | cytosol | 20.73 | 20.34 |
| CDY23090 | Canola | nucleus | 22.63 | 16.52 |
Protein Annotations
| Gene3D:1.20.1280.170 | MapMan:22.6.3.1 | GO:A0A078BXW1 | EnsemblPlants:CDX69615 | ProteinID:CDX69615 | ProteinID:CDX69615.1 |
| ncoils:Coil | InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00135631001 | PFAM:PF03081 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF82 | SUPFAM:SSF74788 | UniParc:UPI0004EDDC92 |
| SEG:seg | : | : | : | : | : |
Description
BnaA10g19640D
Coordinates
chrLK031790:+:1008963..1011020
Molecular Weight (calculated)
78399.7 Da
IEP (calculated)
4.504
GRAVY (calculated)
-0.717
Length
685 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKNDDKDPD HNDKSIIEEK ADVVSDAHPP DESDGNSKEN VDVGNAETEH NPEDNVESQG EEIQQTLESL SEELDQLLSS LSLHKEEHKD DNTEEKEKGD
101: QEDDDYFQIP QFVGKFLDLL EDKLSKYDSG EPKTVWYQDQ DEVSSLLEAV DRVSNLMRLL LNTKSCLDHH EPLINHAGSI QQRAMAFLED EFRILLEESV
201: IKETTDDTGS QRKSTEDAVV SQDNDQVTAP EPGDQEIEYP GYSEDVVALL RKIAEKMKAG GYGWECREVY LVGRRNILMR TLKQDCEFEK VSIDEVQKMS
301: WGELEREIPI WTKTFKNCSS LFFPGELKLA EKIFPGEEGS LFCIVAHGLT IQFLGFAEAV AMTKRSTEKL FKILDIYETL RDSFPPMEEL FPEELRSELR
401: NEVTSVRSRL GESAINIFSD LENSIKSDSS KTPVPGGAVH PLTRYTMNYL KYSCEYKDTL EQVFKSHSKT EQEEEEEPAK SGNSACSAFA SQLMRIMDLL
501: DGNMEAKSKL YKDIPLSCIF MMNNGRYIVQ KIKGSAEIHE VMGDTWCRRR SSELRNYHKS YQRETWGKLL GFLGHEGLMH NGKIVKPNLK ERFKSFNATF
601: DEIHKTQTTW VINDEQLQSE LRVSITAVMI PAYRAFMARF GQYLDPGRQT EKYVKYQPED IEDLIDELFD GNTSSSSTAT AKRRT
101: QEDDDYFQIP QFVGKFLDLL EDKLSKYDSG EPKTVWYQDQ DEVSSLLEAV DRVSNLMRLL LNTKSCLDHH EPLINHAGSI QQRAMAFLED EFRILLEESV
201: IKETTDDTGS QRKSTEDAVV SQDNDQVTAP EPGDQEIEYP GYSEDVVALL RKIAEKMKAG GYGWECREVY LVGRRNILMR TLKQDCEFEK VSIDEVQKMS
301: WGELEREIPI WTKTFKNCSS LFFPGELKLA EKIFPGEEGS LFCIVAHGLT IQFLGFAEAV AMTKRSTEKL FKILDIYETL RDSFPPMEEL FPEELRSELR
401: NEVTSVRSRL GESAINIFSD LENSIKSDSS KTPVPGGAVH PLTRYTMNYL KYSCEYKDTL EQVFKSHSKT EQEEEEEPAK SGNSACSAFA SQLMRIMDLL
501: DGNMEAKSKL YKDIPLSCIF MMNNGRYIVQ KIKGSAEIHE VMGDTWCRRR SSELRNYHKS YQRETWGKLL GFLGHEGLMH NGKIVKPNLK ERFKSFNATF
601: DEIHKTQTTW VINDEQLQSE LRVSITAVMI PAYRAFMARF GQYLDPGRQT EKYVKYQPED IEDLIDELFD GNTSSSSTAT AKRRT
001: MEKNDKDPDH DDKSKGDEKG DVVSDAHPSD DAHHQDGISN ENVDVVGNAE TDHQDPGDNN VDKVSQGEEA PEIRQTLESL SEELDQFLPT LSLHMEEHKD
101: STEEKGEDGY FQIPQFVGKF LDLFEEKLSK YDSGEPKTVW YQDPEEVSSL LEAVDRVSKL MGLLLNTKSC LDHHESLINH AGSIQQRAMA FLEDEFRIIL
201: EESVTKESVV VTDDSNSQRR STADQQDHQN DVVVSQDHDQ MLVPECGDQE IEYPGYPEDV VVVLRKIAEK MKAGGYGWEC REVYLVGRRN ILMRTLKQDC
301: EFEKVSIDEV QKMSWDTLER EIPIWNKTFK DCSSLFFPGE LKLAERIFPG DEGNLFCIVT HGLAIQFLGF AEAVAMTRRS TEKLFKILDI YETLRDSFPA
401: MEELFPEELR SELRNEVTSA RSRLGETAIH IFCDLEHSIK SDSSKTPVPG GAVHPLTRYT MNYLKYSCEY KDTLEQVFKS HSKMEREEEE PVESGNSAFA
501: SQLMRIMELL DGNLETKSKQ YKDIPLSCIF MMNNGRYIVQ KIKGSAEIHE VMGDTWCRRR SSELRNYHKN YQRETWGKLL GFLGHEGLMH NGKIVKPNLK
601: ERFKSFNATF DEIHKTQTTW VVNDEQLQSE LRVSITAVMI PAYRAFMARF GQYLDPGRQT EKYVKYQPED IEDLIDQLFE GNTSSSSTAT ARRRT
101: STEEKGEDGY FQIPQFVGKF LDLFEEKLSK YDSGEPKTVW YQDPEEVSSL LEAVDRVSKL MGLLLNTKSC LDHHESLINH AGSIQQRAMA FLEDEFRIIL
201: EESVTKESVV VTDDSNSQRR STADQQDHQN DVVVSQDHDQ MLVPECGDQE IEYPGYPEDV VVVLRKIAEK MKAGGYGWEC REVYLVGRRN ILMRTLKQDC
301: EFEKVSIDEV QKMSWDTLER EIPIWNKTFK DCSSLFFPGE LKLAERIFPG DEGNLFCIVT HGLAIQFLGF AEAVAMTRRS TEKLFKILDI YETLRDSFPA
401: MEELFPEELR SELRNEVTSA RSRLGETAIH IFCDLEHSIK SDSSKTPVPG GAVHPLTRYT MNYLKYSCEY KDTLEQVFKS HSKMEREEEE PVESGNSAFA
501: SQLMRIMELL DGNLETKSKQ YKDIPLSCIF MMNNGRYIVQ KIKGSAEIHE VMGDTWCRRR SSELRNYHKN YQRETWGKLL GFLGHEGLMH NGKIVKPNLK
601: ERFKSFNATF DEIHKTQTTW VVNDEQLQSE LRVSITAVMI PAYRAFMARF GQYLDPGRQT EKYVKYQPED IEDLIDQLFE GNTSSSSTAT ARRRT
Arabidopsis Description
ATEXO70C2EXO70C2 [Source:UniProtKB/TrEMBL;Acc:A0A178UPG0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.