Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 4
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY60562 Canola cytosol 97.81 96.93
CDX88720 Canola plastid 83.39 83.09
CDX71078 Canola cytosol, mitochondrion, nucleus, plastid 83.58 82.52
CDY49576 Canola cytosol 81.93 81.49
CDX80235 Canola cytosol, nucleus, plastid 81.39 71.25
AT5G59730.1 Thale cress cytosol, plastid 81.39 70.35
CDY60968 Canola cytosol 9.31 48.57
CDX93621 Canola cytosol 38.32 46.77
VIT_06s0004g04010.t01 Wine grape plastid 52.01 46.27
CDY04577 Canola plastid 45.62 46.04
Solyc06g005280.1.1 Tomato plastid 49.27 45.15
PGSC0003DMT400028204 Potato plastid 48.72 44.72
KRH22988 Soybean plastid 39.05 44.49
KRH10327 Soybean plastid 47.99 44.35
KRH29876 Soybean mitochondrion 48.91 44.01
KRH25009 Soybean mitochondrion 48.72 43.49
KRH22987 Soybean cytosol, mitochondrion, plastid 45.26 43.28
CDX95128 Canola cytosol, nucleus, plastid 45.44 42.86
CDY60967 Canola plastid 29.56 42.3
Solyc11g073010.1.1 Tomato plastid 48.72 42.11
CDY31722 Canola mitochondrion, plastid 44.34 41.75
Solyc06g075610.1.1 Tomato plastid 47.45 41.73
PGSC0003DMT400078145 Potato mitochondrion 47.26 41.51
CDX77195 Canola mitochondrion, plastid 43.61 40.92
GSMUA_Achr10P... Banana cytosol 33.39 40.58
PGSC0003DMT400040200 Potato plastid 44.34 40.3
CDY07003 Canola cytosol, golgi, mitochondrion, plastid 28.1 38.89
CDY41297 Canola mitochondrion 43.07 38.82
GSMUA_AchrUn_... Banana cytosol 40.51 38.81
CDY41604 Canola cytosol 43.8 38.77
CDY44712 Canola cytosol 43.07 38.44
CDX74849 Canola plastid 41.61 36.25
GSMUA_Achr6P34400_001 Banana mitochondrion 39.6 35.93
CDX74848 Canola plastid 39.6 35.57
CDX73983 Canola mitochondrion 39.96 35.32
CDY64629 Canola plastid 41.42 35.3
CDX73400 Canola plastid 40.15 35.09
CDX76117 Canola plastid 40.51 35.07
CDY64627 Canola plastid 41.24 34.98
CDY44645 Canola plastid 40.88 34.78
CDY40204 Canola plastid 39.6 34.78
CDY02916 Canola plastid 40.15 34.76
CDY07931 Canola cytosol 39.42 34.5
GSMUA_Achr10P... Banana mitochondrion 38.5 34.31
GSMUA_Achr7P15340_001 Banana mitochondrion 38.14 34.26
CDX93267 Canola plastid 37.23 34.0
CDX74850 Canola plastid 41.42 33.68
CDY02484 Canola cytosol 17.88 32.45
CDY28574 Canola cytosol 15.69 31.85
CDY44646 Canola cytosol 40.51 31.81
CDY50639 Canola cytosol 32.12 28.9
CDY02822 Canola cytosol 15.15 28.82
CDX68265 Canola cytosol 31.93 28.74
CDX71629 Canola cytosol 32.85 26.95
CDY05812 Canola cytosol, plastid 32.85 26.87
CDY04082 Canola cytosol 26.64 25.48
CDX97543 Canola cytoskeleton, cytosol, nucleus 28.65 25.4
CDY44387 Canola cytosol 26.46 25.35
CDY10372 Canola cytosol 13.87 25.33
CDY52262 Canola cytoskeleton, cytosol, nucleus 28.83 24.46
CDY02176 Canola cytosol 24.27 24.18
CDX85273 Canola cytosol 28.47 24.0
CDX70300 Canola cytosol 27.55 23.89
CDY44373 Canola cytosol 24.45 23.8
CDY10374 Canola cytosol 27.55 23.67
CDX86365 Canola cytosol 27.92 23.65
CDY61474 Canola cytosol 21.9 23.62
CDY27076 Canola cytosol 27.01 23.42
CDX91635 Canola cytosol 27.01 23.42
CDY60022 Canola cytosol 26.28 23.3
CDX69666 Canola cytosol 8.03 23.28
CDX97230 Canola cytosol 8.03 23.28
CDY06667 Canola cytosol 25.0 22.95
CDY10240 Canola cytosol 24.82 22.78
CDX78509 Canola nucleus 25.0 21.85
CDY69943 Canola cytosol 24.64 21.53
CDY70944 Canola cytosol 16.42 21.23
CDX69615 Canola cytosol, nucleus, plastid 25.73 20.58
CDX78551 Canola nucleus 25.55 20.56
CDY09840 Canola cytosol, nucleus, plastid 25.73 20.55
CDX70532 Canola nucleus 25.55 20.53
CDX85618 Canola nucleus 25.73 20.2
CDX91088 Canola cytosol, nucleus, vacuole 24.27 17.23
CDY23090 Canola nucleus 24.64 14.39
CDY02823 Canola cytosol 5.66 12.45
Protein Annotations
Gene3D:1.20.1280.170MapMan:22.6.3.1GO:A0A078JQ14UniProt:A0A078JQ14EnsemblPlants:CDY68540ProteinID:CDY68540
ProteinID:CDY68540.1InterPro:Cullin_repeat-like_dom_sfInterPro:Exo70GO:GO:0000145GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006810GO:GO:0006887GO:GO:0008150GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00075409001PFAM:PF03081PANTHER:PTHR12542PANTHER:PTHR12542:SF17SUPFAM:SSF74788UniParc:UPI0004EE08C2
SEG:seg:::::
Description
BnaCnng59460DBnaCnng59460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQ14]
Coordinates
chrLK037519:+:1144..3080
Molecular Weight (calculated)
61755.5 Da
IEP (calculated)
6.527
GRAVY (calculated)
-0.244
Length
548 amino acids
Sequence
(BLAST)
001: MGKQLFRSSP PPEKQPAHQS LAESAVQECT SSINTVISKW TSSSDEFLFS TNSRREAEEF VEAVKHLQST MHRLVSVNAS SDKLVYAHNL MQSAMKLLES
101: EFRRVFSGQD SDAMDDLKTI ADCMISTGYA KECVTVYKTV RKSIVEETLN NLAVERLTLH QVQKMDWETL ESKIRSWLRA AKLTVRSLFF GERLLADHVF
201: SSSVNIVESS FTDITQEGAL TLFAFPENAA KIKKLSPEKM FRFLDMYETL ASLYVEIETI FYFDSAAAVR SQVISSLTRL GDAARTMMTA FETAIQKETS
301: RTPVTGGGIH PLTRYVMNYL SFLVDYSESI ADAYPEELYS SPVSVRIAWV ILLTLCKIDG KAQPYKDVAL SYLFLANNLQ YVVVKVRTSN VKLLLGEDWV
401: VRHEGKVKQY ADKFEKLAWG KVLTSLPEYP AEEITPEEAK EFLVRFDDEF EASYRKQISW VIPDPKLRDW IKVSLSHKLM LVCTELYEIN RLGSRGDGFN
501: VRYTSEDIGN YLSDLYFGSR GSGSGSVSTK GSGTGSSSTG KSREGRSH
Best Arabidopsis Sequence Match ( AT1G07725.1 )
(BLAST)
001: MVLLKPTTLS KSSKVGPQQQ QGFSESLIGD SVEAADAFIC QWVTPHLCDS SSSSCSLSSL FSAQNRLEGR RFLEVLGKLQ YAIQSTVAMN PDSAKLAKGQ
101: DLMRKAMKHL EKEFYRVLKS NRRFLSPESV SGWSSESNIP SRSSGTASDS SSDGELYSES SSELGKDIGG GGNSDAIVDL KMIANCMISS GYEKDCVKIY
201: KKFRKKIIVD TLSHLGFEKL TSTQMQKLEW EILEKKIKIW VIVARVAITT LFNGERILSD HIFSSSVAES CFVDITLQSA LNLFIFSLTV AKSRKTAEKI
301: FPTLDVYQTI LQLTPKIDQI FSYDSTAAVR LQANESLEKL SESVNAMMTE FQSSITKESS KSAISGGGVH QLTRYVMNFI VFLADYSDSL ATILKESSLP
401: LPEDYFSSSG EENPGSGDRS PMAARLAWLI LVLLCKIDAK SRLYNDSALS YLFLANNLHY VVTKVRTSNL RLVLGDDWVA NHEVKVNQYL EKYEKMAWGD
501: VIASLPGDST AGTEAEESLR RFNEAFEEAY KKHKTWVVPD PNLRDEIQAS IARKLMPGYT GFYKKHPVGS CNIVRFTPED LNNYITDLYV GLGRSVPVSK
601: TKKYMVSPSH TTDLK
Arabidopsis Description
ATEXO70H6Exocyst subunit exo70 family protein H6 [Source:UniProtKB/TrEMBL;Acc:Q9LQP9]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.