Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69666 | Canola | cytosol | 31.43 | 17.46 |
| CDX97230 | Canola | cytosol | 31.43 | 17.46 |
| CDY04577 | Canola | plastid | 78.1 | 15.1 |
| AT2G28650.1 | Thale cress | plastid | 66.67 | 12.22 |
| CDY28574 | Canola | cytosol | 28.57 | 11.11 |
| CDX93621 | Canola | cytosol | 46.67 | 10.91 |
| CDY02822 | Canola | cytosol | 28.57 | 10.42 |
| CDY02484 | Canola | cytosol | 28.57 | 9.93 |
| CDX71078 | Canola | cytosol, mitochondrion, nucleus, plastid | 52.38 | 9.91 |
| CDX88720 | Canola | plastid | 50.48 | 9.64 |
| CDY07003 | Canola | cytosol, golgi, mitochondrion, plastid | 35.24 | 9.34 |
| CDY68540 | Canola | plastid | 48.57 | 9.31 |
| CDY49576 | Canola | cytosol | 46.67 | 8.89 |
| CDY60562 | Canola | cytosol | 46.67 | 8.86 |
| CDY10372 | Canola | cytosol | 24.76 | 8.67 |
| CDX95128 | Canola | cytosol, nucleus, plastid | 46.67 | 8.43 |
| VIT_06s0004g04010.t01 | Wine grape | plastid | 45.71 | 7.79 |
| CDX80235 | Canola | cytosol, nucleus, plastid | 44.76 | 7.51 |
| CDX77195 | Canola | mitochondrion, plastid | 40.95 | 7.36 |
| Solyc06g005280.1.1 | Tomato | plastid | 41.9 | 7.36 |
| Solyc06g075610.1.1 | Tomato | plastid | 42.86 | 7.22 |
| PGSC0003DMT400078145 | Potato | mitochondrion | 42.86 | 7.21 |
| CDY40204 | Canola | plastid | 42.86 | 7.21 |
| PGSC0003DMT400028204 | Potato | plastid | 40.95 | 7.2 |
| CDX73400 | Canola | plastid | 42.86 | 7.18 |
| PGSC0003DMT400040200 | Potato | plastid | 40.95 | 7.13 |
| CDY31722 | Canola | mitochondrion, plastid | 39.05 | 7.04 |
| CDY41604 | Canola | cytosol | 40.95 | 6.95 |
| Solyc11g073010.1.1 | Tomato | plastid | 41.9 | 6.94 |
| CDY44712 | Canola | cytosol | 39.05 | 6.68 |
| CDX76117 | Canola | plastid | 40.0 | 6.64 |
| CDY02916 | Canola | plastid | 40.0 | 6.64 |
| KRH25009 | Soybean | mitochondrion | 38.1 | 6.51 |
| KRH22987 | Soybean | cytosol, mitochondrion, plastid | 35.24 | 6.46 |
| KRH29876 | Soybean | mitochondrion | 37.14 | 6.4 |
| CDX93267 | Canola | plastid | 36.19 | 6.33 |
| GSMUA_AchrUn_... | Banana | cytosol | 32.38 | 5.94 |
| CDY61474 | Canola | cytosol | 28.57 | 5.91 |
| KRH10327 | Soybean | plastid | 33.33 | 5.9 |
| CDX74848 | Canola | plastid | 34.29 | 5.9 |
| CDX74849 | Canola | plastid | 35.24 | 5.88 |
| GSMUA_Achr6P34400_001 | Banana | mitochondrion | 33.33 | 5.79 |
| CDY41297 | Canola | mitochondrion | 33.33 | 5.76 |
| CDY64627 | Canola | plastid | 35.24 | 5.73 |
| CDY44645 | Canola | plastid | 34.29 | 5.59 |
| CDY02176 | Canola | cytosol | 28.57 | 5.45 |
| CDY64629 | Canola | plastid | 33.33 | 5.44 |
| CDX78509 | Canola | nucleus | 31.43 | 5.26 |
| CDY69943 | Canola | cytosol | 31.43 | 5.26 |
| CDY44387 | Canola | cytosol | 28.57 | 5.24 |
| CDY04082 | Canola | cytosol | 28.57 | 5.24 |
| CDX74850 | Canola | plastid | 33.33 | 5.19 |
| CDX68265 | Canola | cytosol | 29.52 | 5.09 |
| CDY50639 | Canola | cytosol | 29.52 | 5.09 |
| CDX78551 | Canola | nucleus | 32.38 | 4.99 |
| CDX70532 | Canola | nucleus | 32.38 | 4.99 |
| CDY44646 | Canola | cytosol | 32.38 | 4.87 |
| CDX85618 | Canola | nucleus | 32.38 | 4.87 |
| CDX97543 | Canola | cytoskeleton, cytosol, nucleus | 28.57 | 4.85 |
| CDX69615 | Canola | cytosol, nucleus, plastid | 31.43 | 4.82 |
| CDY09840 | Canola | cytosol, nucleus, plastid | 31.43 | 4.81 |
| CDY07931 | Canola | cytosol | 28.57 | 4.79 |
| CDX73983 | Canola | mitochondrion | 27.62 | 4.68 |
| CDY52262 | Canola | cytoskeleton, cytosol, nucleus | 28.57 | 4.64 |
| CDX71629 | Canola | cytosol | 29.52 | 4.64 |
| CDX86365 | Canola | cytosol | 28.57 | 4.64 |
| CDY05812 | Canola | cytosol, plastid | 29.52 | 4.63 |
| CDY06667 | Canola | cytosol | 25.71 | 4.52 |
| CDY10240 | Canola | cytosol | 25.71 | 4.52 |
| CDX85273 | Canola | cytosol | 27.62 | 4.46 |
| CDY27076 | Canola | cytosol | 26.67 | 4.43 |
| CDX91635 | Canola | cytosol | 26.67 | 4.43 |
| GSMUA_Achr10P... | Banana | mitochondrion | 25.71 | 4.39 |
| CDY60022 | Canola | cytosol | 25.71 | 4.37 |
| CDX70300 | Canola | cytosol | 24.76 | 4.11 |
| GSMUA_Achr7P15340_001 | Banana | mitochondrion | 23.81 | 4.1 |
| CDY10374 | Canola | cytosol | 24.76 | 4.08 |
| CDX91088 | Canola | cytosol, nucleus, vacuole | 26.67 | 3.63 |
| CDY23090 | Canola | nucleus | 27.62 | 3.09 |
| CDY44373 | Canola | cytosol | 13.33 | 2.49 |
| CDY60967 | Canola | plastid | 5.71 | 1.57 |
| GSMUA_Achr10P... | Banana | cytosol | 1.9 | 0.44 |
| CDY70944 | Canola | cytosol | 0.0 | 0.0 |
| KRH22988 | Soybean | plastid | 0.0 | 0.0 |
| CDY02823 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1280.170 | MapMan:35.2 | GO:A0A078J4A2 | UniProt:A0A078J4A2 | EnsemblPlants:CDY60968 | ProteinID:CDY60968 |
| ProteinID:CDY60968.1 | InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00030343001 | PFAM:PF03081 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF26 | SUPFAM:SSF74788 | UniParc:UPI0004EEF4D0 |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng37170DBnaCnng37170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4A2]
Coordinates
chrLK033939:+:22694..23011
Molecular Weight (calculated)
11889.9 Da
IEP (calculated)
4.715
GRAVY (calculated)
-0.372
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSLATADEE EAEEFVRRFS DRFEEVYKRQ TGWVVPDSKL RDEIKVSAAM TLIPAYTEFY KRYRVGLRKN VGVAPEDIGN YISDLYFGSG ESGCVSSVHS
101: SVSYV
101: SVSYV
001: MVLFTLSTTS SSSSKLKQHS HQSFSESLME HTIEDAESII HRWISPEHVH SSSFCFISSL FSTENREEAK RFIDAVTTLH SGMIRLISVN PTSMKLVKAE
101: NLMRISMTHL SKEFYRILKS NRRYLDPESV SIRSSKASDS DSDSDSNTMD DLKMIADCMI SSGYSKECFK IYKRIRKSII NEALNQLGFE NLTFSQIQKL
201: EWEVMEKKIR KWLRTTTRAV NTLFSGEQIL SDHVFSSSSS TIRESAFAEI TSQTALALFT FPEKMAKCRK SPEKIFLTLD VYQTIVDLLP KINELFSSDS
301: TSTVRSQVDL TLVNLREGVV SMIDEFESSI SKESSKSLIS GGGIHQLTRY VMNFIVFLAD YSDTLSDIIS KPSLPSPEEE KDSGDSSPVK SRISRLILFL
401: LCKIDAKSRL YNDVALSYLF LINNVNYVVV KVRSSNLKTV LSEDWVKKHE AKVKKYVAKF EEIVWGEMMT SLSDDVTMTA EEGIKRFSDG FEEAYKRQTG
501: WIVPDSKLRD EIKRSVGMMI IPRYSGFCER NRVRLLENVG FDPEDIGNYL SDLYFGSGGS GSGSSVHSSG SSV
101: NLMRISMTHL SKEFYRILKS NRRYLDPESV SIRSSKASDS DSDSDSNTMD DLKMIADCMI SSGYSKECFK IYKRIRKSII NEALNQLGFE NLTFSQIQKL
201: EWEVMEKKIR KWLRTTTRAV NTLFSGEQIL SDHVFSSSSS TIRESAFAEI TSQTALALFT FPEKMAKCRK SPEKIFLTLD VYQTIVDLLP KINELFSSDS
301: TSTVRSQVDL TLVNLREGVV SMIDEFESSI SKESSKSLIS GGGIHQLTRY VMNFIVFLAD YSDTLSDIIS KPSLPSPEEE KDSGDSSPVK SRISRLILFL
401: LCKIDAKSRL YNDVALSYLF LINNVNYVVV KVRSSNLKTV LSEDWVKKHE AKVKKYVAKF EEIVWGEMMT SLSDDVTMTA EEGIKRFSDG FEEAYKRQTG
501: WIVPDSKLRD EIKRSVGMMI IPRYSGFCER NRVRLLENVG FDPEDIGNYL SDLYFGSGGS GSGSSVHSSG SSV
Arabidopsis Description
ATEXO70H8At2g28650 [Source:UniProtKB/TrEMBL;Acc:Q9SIB0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.