Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY49576 | Canola | cytosol | 85.62 | 97.28 |
Bra002537.1-P | Field mustard | cytosol, nucleus, plastid | 97.44 | 97.13 |
CDX71078 | Canola | cytosol, mitochondrion, nucleus, plastid | 74.92 | 84.5 |
CDX88720 | Canola | plastid | 74.12 | 84.36 |
CDY60562 | Canola | cytosol | 72.68 | 82.28 |
CDY68540 | Canola | plastid | 71.25 | 81.39 |
AT5G59730.1 | Thale cress | cytosol, plastid | 81.47 | 80.44 |
VIT_06s0004g04010.t01 | Wine grape | plastid | 50.32 | 51.14 |
CDX93621 | Canola | cytosol | 35.46 | 49.44 |
KRH29876 | Soybean | mitochondrion | 46.17 | 47.45 |
KRH25009 | Soybean | mitochondrion | 46.01 | 46.91 |
KRH22988 | Soybean | plastid | 35.94 | 46.78 |
CDY04577 | Canola | plastid | 40.58 | 46.78 |
Solyc06g005280.1.1 | Tomato | plastid | 44.41 | 46.49 |
Solyc11g073010.1.1 | Tomato | plastid | 46.49 | 45.9 |
PGSC0003DMT400028204 | Potato | plastid | 43.77 | 45.9 |
KRH10327 | Soybean | plastid | 43.29 | 45.7 |
CDY31722 | Canola | mitochondrion, plastid | 42.33 | 45.53 |
CDX95128 | Canola | cytosol, nucleus, plastid | 42.01 | 45.27 |
CDX77195 | Canola | mitochondrion, plastid | 42.01 | 45.03 |
KRH22987 | Soybean | cytosol, mitochondrion, plastid | 41.21 | 45.03 |
Solyc06g075610.1.1 | Tomato | plastid | 44.73 | 44.94 |
CDY60968 | Canola | cytosol | 7.51 | 44.76 |
PGSC0003DMT400040200 | Potato | plastid | 42.97 | 44.61 |
PGSC0003DMT400078145 | Potato | mitochondrion | 44.41 | 44.55 |
CDY60967 | Canola | plastid | 27.16 | 44.39 |
GSMUA_Achr10P... | Banana | cytosol | 31.31 | 43.46 |
CDY41297 | Canola | mitochondrion | 41.05 | 42.27 |
CDY41604 | Canola | cytosol | 41.53 | 42.0 |
CDY44712 | Canola | cytosol | 41.05 | 41.86 |
GSMUA_AchrUn_... | Banana | cytosol | 37.86 | 41.43 |
CDY07003 | Canola | cytosol, golgi, mitochondrion, plastid | 26.04 | 41.16 |
GSMUA_Achr6P34400_001 | Banana | mitochondrion | 37.86 | 39.24 |
GSMUA_Achr10P... | Banana | mitochondrion | 37.7 | 38.37 |
CDX74849 | Canola | plastid | 38.5 | 38.31 |
CDX74848 | Canola | plastid | 37.22 | 38.2 |
CDX76117 | Canola | plastid | 38.5 | 38.07 |
CDY02916 | Canola | plastid | 38.34 | 37.91 |
CDX73400 | Canola | plastid | 37.7 | 37.64 |
CDY64629 | Canola | plastid | 38.66 | 37.64 |
CDY64627 | Canola | plastid | 38.82 | 37.62 |
CDY44645 | Canola | plastid | 38.5 | 37.42 |
CDY40204 | Canola | plastid | 37.22 | 37.34 |
GSMUA_Achr7P15340_001 | Banana | mitochondrion | 36.26 | 37.21 |
CDX93267 | Canola | plastid | 35.46 | 37.0 |
CDY07931 | Canola | cytosol | 35.94 | 35.94 |
CDX73983 | Canola | mitochondrion | 35.3 | 35.65 |
CDX74850 | Canola | plastid | 38.34 | 35.61 |
CDY44646 | Canola | cytosol | 37.7 | 33.81 |
CDY28574 | Canola | cytosol | 14.06 | 32.59 |
CDY02484 | Canola | cytosol | 15.65 | 32.45 |
CDY02822 | Canola | cytosol | 13.9 | 30.21 |
CDX71629 | Canola | cytosol | 30.67 | 28.74 |
CDY05812 | Canola | cytosol, plastid | 30.67 | 28.66 |
CDX68265 | Canola | cytosol | 27.32 | 28.08 |
CDY50639 | Canola | cytosol | 27.16 | 27.91 |
CDY04082 | Canola | cytosol | 24.6 | 26.88 |
CDY44387 | Canola | cytosol | 24.44 | 26.75 |
CDY02176 | Canola | cytosol | 23.48 | 26.73 |
CDY10372 | Canola | cytosol | 12.46 | 26.0 |
CDX97543 | Canola | cytoskeleton, cytosol, nucleus | 25.08 | 25.4 |
CDY52262 | Canola | cytoskeleton, cytosol, nucleus | 25.24 | 24.46 |
CDX86365 | Canola | cytosol | 25.24 | 24.42 |
CDX85273 | Canola | cytosol | 25.24 | 24.31 |
CDY61474 | Canola | cytosol | 19.65 | 24.21 |
CDY44373 | Canola | cytosol | 21.57 | 23.98 |
CDX91635 | Canola | cytosol | 24.12 | 23.89 |
CDY27076 | Canola | cytosol | 24.12 | 23.89 |
CDX69666 | Canola | cytosol | 7.19 | 23.81 |
CDX97230 | Canola | cytosol | 7.19 | 23.81 |
CDY60022 | Canola | cytosol | 23.48 | 23.79 |
CDX70300 | Canola | cytosol | 23.8 | 23.58 |
CDY10374 | Canola | cytosol | 23.8 | 23.35 |
CDY06667 | Canola | cytosol | 21.73 | 22.78 |
CDY10240 | Canola | cytosol | 21.73 | 22.78 |
CDY69943 | Canola | cytosol | 21.89 | 21.85 |
CDX78509 | Canola | nucleus | 21.89 | 21.85 |
CDY70944 | Canola | cytosol | 14.7 | 21.7 |
CDX78551 | Canola | nucleus | 22.36 | 20.56 |
CDX70532 | Canola | nucleus | 22.36 | 20.53 |
CDX69615 | Canola | cytosol, nucleus, plastid | 22.04 | 20.15 |
CDY09840 | Canola | cytosol, nucleus, plastid | 22.04 | 20.12 |
CDX85618 | Canola | nucleus | 22.2 | 19.91 |
CDX91088 | Canola | cytosol, nucleus, vacuole | 20.77 | 16.84 |
CDY23090 | Canola | nucleus | 23.8 | 15.88 |
CDY02823 | Canola | cytosol | 5.43 | 13.65 |
Protein Annotations
EnsemblPlants:CDX80235 | EnsemblPlantsGene:GSBRNA2T00133199001 | GO:A0A078CTP8 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF17 | PFAM:PF03081 | ProteinID:CDX80235 |
ProteinID:CDX80235.1 | SEG:seg | SUPFAM:SSF74788 | UniParc:UPI0004EF4A01 | MapMan:22.6.3.1 | : |
Description
BnaC09g35070D
Coordinates
chrLK031820:+:759720..761759
Molecular Weight (calculated)
70180.2 Da
IEP (calculated)
6.111
GRAVY (calculated)
-0.262
Length
626 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKHLFRSSP PPEKQTAHQS LAETAVQECM RDITTVISKW TSSSDEFLFS TNSRSEAAEF VEVVRHLHST MHRLVAVSPS SEKLIYAQNL MQSAMNLLES
101: EFHRVLKENK QYLHPESVSL RSCRSSRRFS TSTVTSISDS EDEGGSYEEN AAADEHRFSG GDSDAMDDLK MIADCMISTG YAKECVNVYK TVRRSIVDET
201: LHNLSVERLT LHQIQKMDWE ILEPKIKSWL QAAKLAVRKL FFGERILADH VFSSSTNIVE ASFTDITQEG ALALFAFPEH AAKIKKLSPE KMFRFLDMYE
301: SLANLFVEIE SIFYFDSAAA VRSQVINSLA KLGDAVRFMM NDFETAIQKE ASKTLIVGGG VHPLTRYVMN YLSFLADYDE SISVIFENWQ LTVPSPLPES
401: LFISGGGDDA HPEDLYSSPV SKRIAWVILL TLCKIDGKAQ PYKDVALSYL FLANNLQYVV VKVRSSNLRL LLGDDWVVKH EAKVNQYAEK FEKLAYGKVL
501: TSLPENPAEK ITPEEARALF ARFNDEFEAA YRKQISWVIP DPNLRDRIKI SLSQKLMLVC TEFYEVNRFA LGGDAFNARY TPEDIGNYLS DLYFGSRGSG
601: SSSTTTGSGS GTGSTTTGKS RGGRSH
101: EFHRVLKENK QYLHPESVSL RSCRSSRRFS TSTVTSISDS EDEGGSYEEN AAADEHRFSG GDSDAMDDLK MIADCMISTG YAKECVNVYK TVRRSIVDET
201: LHNLSVERLT LHQIQKMDWE ILEPKIKSWL QAAKLAVRKL FFGERILADH VFSSSTNIVE ASFTDITQEG ALALFAFPEH AAKIKKLSPE KMFRFLDMYE
301: SLANLFVEIE SIFYFDSAAA VRSQVINSLA KLGDAVRFMM NDFETAIQKE ASKTLIVGGG VHPLTRYVMN YLSFLADYDE SISVIFENWQ LTVPSPLPES
401: LFISGGGDDA HPEDLYSSPV SKRIAWVILL TLCKIDGKAQ PYKDVALSYL FLANNLQYVV VKVRSSNLRL LLGDDWVVKH EAKVNQYAEK FEKLAYGKVL
501: TSLPENPAEK ITPEEARALF ARFNDEFEAA YRKQISWVIP DPNLRDRIKI SLSQKLMLVC TEFYEVNRFA LGGDAFNARY TPEDIGNYLS DLYFGSRGSG
601: SSSTTTGSGS GTGSTTTGKS RGGRSH
001: MGKHLFRSSP PPEKPTAHLS LAESAVQECM SNINTVISKW TSPAASSSDD FLFSTNSRRE AEEFVTAVRH LQSTMHRLVS VNPSSEKLIY AQNLMQSAMK
101: LLESEFHRVL KANREYLDPE CVSVRSYRSS RFSTSTTTSV SDSEDESSYE ENADEEHRFS GGDSDAMDDL KMIADCMIST GYAKECVRVY KTVRKSIVDE
201: TLHNLQMERF NLHQVQKMDW EILESKIKTW LKAVKLAVRK LFFGERILAD HVFSSSGLIV ESSFTEITQE GALILFTFPE YASKIKKLTP EKMFRFLDMY
301: EALANLYVEI ESIFYFESAA AVRSQVINSL ARLGDATRLM MTDFESAIQK ETSKTPIIGG GVHPLTRYVM NYLSFLADYS DSIAAIFENW KLSVPTPLPD
401: SLYISGGDEA NPEDLYSSPV SVRIAWVILL TLCKIDGKAQ PYKDVALSYL FLANNLQYVV VKVRSSTLKV LLGDDWVFRH EEKVKLYADK FEKLAWGKVL
501: DLLPEIPTDE ISPEEAKVLV ARFNDEFETS YRKQTSWVIP DPKLRDQIKI TLSQKLMLVC TEFYRMNRFA YGMVGDNEAI SRYTPEDIGN YLSDLYFGSR
601: GSGSVSTAGG SGSGSGSGTG SSSTGKARGG RSSH
101: LLESEFHRVL KANREYLDPE CVSVRSYRSS RFSTSTTTSV SDSEDESSYE ENADEEHRFS GGDSDAMDDL KMIADCMIST GYAKECVRVY KTVRKSIVDE
201: TLHNLQMERF NLHQVQKMDW EILESKIKTW LKAVKLAVRK LFFGERILAD HVFSSSGLIV ESSFTEITQE GALILFTFPE YASKIKKLTP EKMFRFLDMY
301: EALANLYVEI ESIFYFESAA AVRSQVINSL ARLGDATRLM MTDFESAIQK ETSKTPIIGG GVHPLTRYVM NYLSFLADYS DSIAAIFENW KLSVPTPLPD
401: SLYISGGDEA NPEDLYSSPV SVRIAWVILL TLCKIDGKAQ PYKDVALSYL FLANNLQYVV VKVRSSTLKV LLGDDWVFRH EEKVKLYADK FEKLAWGKVL
501: DLLPEIPTDE ISPEEAKVLV ARFNDEFETS YRKQTSWVIP DPKLRDQIKI TLSQKLMLVC TEFYRMNRFA YGMVGDNEAI SRYTPEDIGN YLSDLYFGSR
601: GSGSVSTAGG SGSGSGSGTG SSSTGKARGG RSSH
Arabidopsis Description
ATEXO70H7AT5g59730/mth12_130 [Source:UniProtKB/TrEMBL;Acc:Q9FN91]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.