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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY49576 Canola cytosol 85.62 97.28
Bra002537.1-P Field mustard cytosol, nucleus, plastid 97.44 97.13
CDX71078 Canola cytosol, mitochondrion, nucleus, plastid 74.92 84.5
CDX88720 Canola plastid 74.12 84.36
CDY60562 Canola cytosol 72.68 82.28
CDY68540 Canola plastid 71.25 81.39
AT5G59730.1 Thale cress cytosol, plastid 81.47 80.44
VIT_06s0004g04010.t01 Wine grape plastid 50.32 51.14
CDX93621 Canola cytosol 35.46 49.44
KRH29876 Soybean mitochondrion 46.17 47.45
KRH25009 Soybean mitochondrion 46.01 46.91
KRH22988 Soybean plastid 35.94 46.78
CDY04577 Canola plastid 40.58 46.78
Solyc06g005280.1.1 Tomato plastid 44.41 46.49
Solyc11g073010.1.1 Tomato plastid 46.49 45.9
PGSC0003DMT400028204 Potato plastid 43.77 45.9
KRH10327 Soybean plastid 43.29 45.7
CDY31722 Canola mitochondrion, plastid 42.33 45.53
CDX95128 Canola cytosol, nucleus, plastid 42.01 45.27
CDX77195 Canola mitochondrion, plastid 42.01 45.03
KRH22987 Soybean cytosol, mitochondrion, plastid 41.21 45.03
Solyc06g075610.1.1 Tomato plastid 44.73 44.94
CDY60968 Canola cytosol 7.51 44.76
PGSC0003DMT400040200 Potato plastid 42.97 44.61
PGSC0003DMT400078145 Potato mitochondrion 44.41 44.55
CDY60967 Canola plastid 27.16 44.39
GSMUA_Achr10P... Banana cytosol 31.31 43.46
CDY41297 Canola mitochondrion 41.05 42.27
CDY41604 Canola cytosol 41.53 42.0
CDY44712 Canola cytosol 41.05 41.86
GSMUA_AchrUn_... Banana cytosol 37.86 41.43
CDY07003 Canola cytosol, golgi, mitochondrion, plastid 26.04 41.16
GSMUA_Achr6P34400_001 Banana mitochondrion 37.86 39.24
GSMUA_Achr10P... Banana mitochondrion 37.7 38.37
CDX74849 Canola plastid 38.5 38.31
CDX74848 Canola plastid 37.22 38.2
CDX76117 Canola plastid 38.5 38.07
CDY02916 Canola plastid 38.34 37.91
CDX73400 Canola plastid 37.7 37.64
CDY64629 Canola plastid 38.66 37.64
CDY64627 Canola plastid 38.82 37.62
CDY44645 Canola plastid 38.5 37.42
CDY40204 Canola plastid 37.22 37.34
GSMUA_Achr7P15340_001 Banana mitochondrion 36.26 37.21
CDX93267 Canola plastid 35.46 37.0
CDY07931 Canola cytosol 35.94 35.94
CDX73983 Canola mitochondrion 35.3 35.65
CDX74850 Canola plastid 38.34 35.61
CDY44646 Canola cytosol 37.7 33.81
CDY28574 Canola cytosol 14.06 32.59
CDY02484 Canola cytosol 15.65 32.45
CDY02822 Canola cytosol 13.9 30.21
CDX71629 Canola cytosol 30.67 28.74
CDY05812 Canola cytosol, plastid 30.67 28.66
CDX68265 Canola cytosol 27.32 28.08
CDY50639 Canola cytosol 27.16 27.91
CDY04082 Canola cytosol 24.6 26.88
CDY44387 Canola cytosol 24.44 26.75
CDY02176 Canola cytosol 23.48 26.73
CDY10372 Canola cytosol 12.46 26.0
CDX97543 Canola cytoskeleton, cytosol, nucleus 25.08 25.4
CDY52262 Canola cytoskeleton, cytosol, nucleus 25.24 24.46
CDX86365 Canola cytosol 25.24 24.42
CDX85273 Canola cytosol 25.24 24.31
CDY61474 Canola cytosol 19.65 24.21
CDY44373 Canola cytosol 21.57 23.98
CDX91635 Canola cytosol 24.12 23.89
CDY27076 Canola cytosol 24.12 23.89
CDX69666 Canola cytosol 7.19 23.81
CDX97230 Canola cytosol 7.19 23.81
CDY60022 Canola cytosol 23.48 23.79
CDX70300 Canola cytosol 23.8 23.58
CDY10374 Canola cytosol 23.8 23.35
CDY06667 Canola cytosol 21.73 22.78
CDY10240 Canola cytosol 21.73 22.78
CDY69943 Canola cytosol 21.89 21.85
CDX78509 Canola nucleus 21.89 21.85
CDY70944 Canola cytosol 14.7 21.7
CDX78551 Canola nucleus 22.36 20.56
CDX70532 Canola nucleus 22.36 20.53
CDX69615 Canola cytosol, nucleus, plastid 22.04 20.15
CDY09840 Canola cytosol, nucleus, plastid 22.04 20.12
CDX85618 Canola nucleus 22.2 19.91
CDX91088 Canola cytosol, nucleus, vacuole 20.77 16.84
CDY23090 Canola nucleus 23.8 15.88
CDY02823 Canola cytosol 5.43 13.65
Protein Annotations
EnsemblPlants:CDX80235EnsemblPlantsGene:GSBRNA2T00133199001GO:A0A078CTP8GO:GO:0000145GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006810GO:GO:0006887GO:GO:0008150GO:GO:0009987
InterPro:Cullin_repeat-like_dom_sfInterPro:Exo70PANTHER:PTHR12542PANTHER:PTHR12542:SF17PFAM:PF03081ProteinID:CDX80235
ProteinID:CDX80235.1SEG:segSUPFAM:SSF74788UniParc:UPI0004EF4A01MapMan:22.6.3.1:
Description
BnaC09g35070D
Coordinates
chrLK031820:+:759720..761759
Molecular Weight (calculated)
70180.2 Da
IEP (calculated)
6.111
GRAVY (calculated)
-0.262
Length
626 amino acids
Sequence
(BLAST)
001: MGKHLFRSSP PPEKQTAHQS LAETAVQECM RDITTVISKW TSSSDEFLFS TNSRSEAAEF VEVVRHLHST MHRLVAVSPS SEKLIYAQNL MQSAMNLLES
101: EFHRVLKENK QYLHPESVSL RSCRSSRRFS TSTVTSISDS EDEGGSYEEN AAADEHRFSG GDSDAMDDLK MIADCMISTG YAKECVNVYK TVRRSIVDET
201: LHNLSVERLT LHQIQKMDWE ILEPKIKSWL QAAKLAVRKL FFGERILADH VFSSSTNIVE ASFTDITQEG ALALFAFPEH AAKIKKLSPE KMFRFLDMYE
301: SLANLFVEIE SIFYFDSAAA VRSQVINSLA KLGDAVRFMM NDFETAIQKE ASKTLIVGGG VHPLTRYVMN YLSFLADYDE SISVIFENWQ LTVPSPLPES
401: LFISGGGDDA HPEDLYSSPV SKRIAWVILL TLCKIDGKAQ PYKDVALSYL FLANNLQYVV VKVRSSNLRL LLGDDWVVKH EAKVNQYAEK FEKLAYGKVL
501: TSLPENPAEK ITPEEARALF ARFNDEFEAA YRKQISWVIP DPNLRDRIKI SLSQKLMLVC TEFYEVNRFA LGGDAFNARY TPEDIGNYLS DLYFGSRGSG
601: SSSTTTGSGS GTGSTTTGKS RGGRSH
Best Arabidopsis Sequence Match ( AT5G59730.1 )
(BLAST)
001: MGKHLFRSSP PPEKPTAHLS LAESAVQECM SNINTVISKW TSPAASSSDD FLFSTNSRRE AEEFVTAVRH LQSTMHRLVS VNPSSEKLIY AQNLMQSAMK
101: LLESEFHRVL KANREYLDPE CVSVRSYRSS RFSTSTTTSV SDSEDESSYE ENADEEHRFS GGDSDAMDDL KMIADCMIST GYAKECVRVY KTVRKSIVDE
201: TLHNLQMERF NLHQVQKMDW EILESKIKTW LKAVKLAVRK LFFGERILAD HVFSSSGLIV ESSFTEITQE GALILFTFPE YASKIKKLTP EKMFRFLDMY
301: EALANLYVEI ESIFYFESAA AVRSQVINSL ARLGDATRLM MTDFESAIQK ETSKTPIIGG GVHPLTRYVM NYLSFLADYS DSIAAIFENW KLSVPTPLPD
401: SLYISGGDEA NPEDLYSSPV SVRIAWVILL TLCKIDGKAQ PYKDVALSYL FLANNLQYVV VKVRSSTLKV LLGDDWVFRH EEKVKLYADK FEKLAWGKVL
501: DLLPEIPTDE ISPEEAKVLV ARFNDEFETS YRKQTSWVIP DPKLRDQIKI TLSQKLMLVC TEFYRMNRFA YGMVGDNEAI SRYTPEDIGN YLSDLYFGSR
601: GSGSVSTAGG SGSGSGSGTG SSSTGKARGG RSSH
Arabidopsis Description
ATEXO70H7AT5g59730/mth12_130 [Source:UniProtKB/TrEMBL;Acc:Q9FN91]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.