Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027373.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 98.06 | 98.06 |
| CDY52262 | Canola | cytoskeleton, cytosol, nucleus | 98.06 | 93.81 |
| AT3G14090.1 | Thale cress | cytoskeleton, cytosol, nucleus | 83.66 | 82.99 |
| CDY02484 | Canola | cytosol | 38.51 | 78.81 |
| CDY28574 | Canola | cytosol | 33.33 | 76.3 |
| CDY61474 | Canola | cytosol | 57.61 | 70.08 |
| CDX68265 | Canola | cytosol | 61.16 | 62.07 |
| CDY50639 | Canola | cytosol | 61.0 | 61.9 |
| GSMUA_Achr9P14390_001 | Banana | cytosol | 54.69 | 59.72 |
| GSMUA_Achr10P... | Banana | cytosol | 55.02 | 58.02 |
| OQU89565 | Sorghum | cytosol | 55.02 | 54.66 |
| Os09t0439600-01 | Rice | cytosol | 55.83 | 54.08 |
| Zm00001d020617_P001 | Maize | cytosol | 54.85 | 53.13 |
| TraesCS5B01G210700.1 | Wheat | cytosol | 51.13 | 52.93 |
| Zm00001d005816_P001 | Maize | cytosol | 54.53 | 52.9 |
| EES13957 | Sorghum | cytosol | 54.05 | 52.85 |
| TraesCS5A01G213100.1 | Wheat | cytosol | 51.13 | 52.84 |
| Zm00001d032075_P001 | Maize | cytosol | 53.56 | 52.46 |
| TraesCS5D01G218900.1 | Wheat | cytosol | 50.65 | 52.08 |
| TraesCS7B01G182000.2 | Wheat | cytosol | 53.07 | 51.33 |
| Zm00001d050095_P001 | Maize | cytosol | 51.94 | 51.28 |
| TraesCS7D01G290600.1 | Wheat | cytosol | 53.24 | 51.17 |
| TraesCS7A01G290900.2 | Wheat | cytosol | 53.07 | 51.09 |
| GSMUA_Achr10P... | Banana | cytosol | 46.12 | 50.8 |
| HORVU5Hr1G062200.3 | Barley | cytosol | 55.5 | 48.79 |
| CDX69666 | Canola | cytosol | 13.92 | 45.5 |
| CDX97230 | Canola | cytosol | 13.92 | 45.5 |
| Os08t0455700-01 | Rice | cytosol | 2.59 | 44.44 |
| HORVU7Hr1G064400.2 | Barley | cytosol | 47.41 | 41.62 |
| CDY02822 | Canola | cytosol | 17.48 | 37.5 |
| CDY05812 | Canola | cytosol, plastid | 37.7 | 34.78 |
| CDX71629 | Canola | cytosol | 37.54 | 34.73 |
| CDY10372 | Canola | cytosol | 16.5 | 34.0 |
| CDY44387 | Canola | cytosol | 31.23 | 33.74 |
| CDY04082 | Canola | cytosol | 31.07 | 33.51 |
| CDY60022 | Canola | cytosol | 30.74 | 30.74 |
| CDX93621 | Canola | cytosol | 22.17 | 30.51 |
| CDX86365 | Canola | cytosol | 31.55 | 30.14 |
| CDY02176 | Canola | cytosol | 26.54 | 29.82 |
| CDX85273 | Canola | cytosol | 31.23 | 29.69 |
| CDY04577 | Canola | plastid | 26.05 | 29.65 |
| CDX70300 | Canola | cytosol | 30.1 | 29.43 |
| CDY69943 | Canola | cytosol | 29.61 | 29.19 |
| CDX78509 | Canola | nucleus | 29.61 | 29.19 |
| CDY10374 | Canola | cytosol | 30.1 | 29.15 |
| CDY44373 | Canola | cytosol | 26.38 | 28.95 |
| CDY60967 | Canola | plastid | 17.8 | 28.72 |
| CDY68540 | Canola | plastid | 25.4 | 28.65 |
| CDY60968 | Canola | cytosol | 4.85 | 28.57 |
| CDX88720 | Canola | plastid | 25.4 | 28.55 |
| CDY10240 | Canola | cytosol | 27.51 | 28.48 |
| CDX71078 | Canola | cytosol, mitochondrion, nucleus, plastid | 25.57 | 28.47 |
| CDY27076 | Canola | cytosol | 28.96 | 28.32 |
| CDX91635 | Canola | cytosol | 28.96 | 28.32 |
| CDY06667 | Canola | cytosol | 27.35 | 28.31 |
| CDY70944 | Canola | cytosol | 19.26 | 28.07 |
| CDY49576 | Canola | cytosol | 24.92 | 27.95 |
| CDY60562 | Canola | cytosol | 24.92 | 27.85 |
| CDX93267 | Canola | plastid | 27.02 | 27.83 |
| CDY07003 | Canola | cytosol, golgi, mitochondrion, plastid | 17.8 | 27.78 |
| CDY41297 | Canola | mitochondrion | 27.18 | 27.63 |
| CDX78551 | Canola | nucleus | 30.42 | 27.61 |
| CDX70532 | Canola | nucleus | 30.26 | 27.42 |
| CDX95128 | Canola | cytosol, nucleus, plastid | 25.57 | 27.19 |
| CDY31722 | Canola | mitochondrion, plastid | 25.57 | 27.15 |
| CDY44712 | Canola | cytosol | 26.86 | 27.04 |
| CDY41604 | Canola | cytosol | 26.86 | 26.82 |
| CDX73400 | Canola | plastid | 27.18 | 26.79 |
| CDY40204 | Canola | plastid | 27.02 | 26.76 |
| CDY44645 | Canola | plastid | 27.67 | 26.55 |
| CDX77195 | Canola | mitochondrion, plastid | 25.08 | 26.54 |
| CDY09840 | Canola | cytosol, nucleus, plastid | 29.45 | 26.53 |
| CDX74849 | Canola | plastid | 26.86 | 26.39 |
| CDX69615 | Canola | cytosol, nucleus, plastid | 29.13 | 26.28 |
| CDY64629 | Canola | plastid | 27.18 | 26.13 |
| CDY02916 | Canola | plastid | 26.7 | 26.07 |
| CDX74848 | Canola | plastid | 25.73 | 26.07 |
| CDX76117 | Canola | plastid | 26.54 | 25.91 |
| CDX85618 | Canola | nucleus | 29.13 | 25.79 |
| CDY64627 | Canola | plastid | 26.7 | 25.54 |
| CDX80235 | Canola | cytosol, nucleus, plastid | 25.4 | 25.08 |
| CDX74850 | Canola | plastid | 27.02 | 24.78 |
| CDX73983 | Canola | mitochondrion | 24.6 | 24.52 |
| CDY07931 | Canola | cytosol | 24.6 | 24.28 |
| CDY44646 | Canola | cytosol | 27.18 | 24.07 |
| Zm00001d050972_P005 | Maize | cytosol, peroxisome, plasma membrane | 45.47 | 22.64 |
| CDX91088 | Canola | cytosol, nucleus, vacuole | 27.99 | 22.41 |
| CDY02823 | Canola | cytosol | 8.09 | 20.08 |
| CDY23090 | Canola | nucleus | 27.51 | 18.12 |
Protein Annotations
| EnsemblPlants:CDX97543 | EnsemblPlantsGene:GSBRNA2T00104754001 | GO:A0A078EDY9 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF27 | PFAM:PF03081 | ProteinID:CDX97543 |
| ProteinID:CDX97543.1 | SEG:seg | SUPFAM:SSF74788 | UniParc:UPI0004EDF4A4 | MapMan:22.6.3.1 | : |
Description
BnaA05g25360D
Coordinates
chrLK031900:-:216790..218940
Molecular Weight (calculated)
69860.5 Da
IEP (calculated)
4.892
GRAVY (calculated)
-0.313
Length
618 amino acids
Sequence
(BLAST)
(BLAST)
001: MESPENSVGF DSDGSLETAE RIILRWDSTA SEEARGKMIF QSDRDEVDRF LRAVDEIQRS VSSLSFSSPP SFSSAATDDQ EVKANSALQI AMARLEEEFR
101: NILLSQTSVF EPDSLFLEES SVSCEDSTDA PPEEEQEGSD SNSGSSRLTR RRSSYRSTSS IREMDLISPE AVSDLRSIVQ RMVAAGYSRE CIQVYGNVRK
201: SAMDTILKQL GIVKISIGDV QKLEWEVVEG KIRKWIRAAK VCVRIVFSSE KRLCSDLFDE PMDATCFMET VKTSALRLFT FPEAISISRR SPEKLFKILD
301: LHDAMGDMMP DIEAIFDSDD DSSSSRAVYL QAGEIQTRLA EAARGILSEF ENAVLREPSV VPVPGGTIHP LTRYVMNYIS LISDYKQTLN NLIVSDPSTG
401: SDPNPNAPVI DFTELDGKSP LALHLIWLIM VLHFNLEEKS HHYRDASLAH IFIMNNIHYI VQKVKGSPEL REMIGDHYLR KLTGIFRHAA TNYQRSTWVR
501: VLNSLRDEGL HVSGSFSSGV SRSALRERFK AFNAMLEDVH RSQSTWSVPD AQLREELRIS LSEHLIPAYR SFLGRFRGNI ESGRHPENYL KYSVEDIDRI
601: VLDFFEGIEP FFEFLFTG
101: NILLSQTSVF EPDSLFLEES SVSCEDSTDA PPEEEQEGSD SNSGSSRLTR RRSSYRSTSS IREMDLISPE AVSDLRSIVQ RMVAAGYSRE CIQVYGNVRK
201: SAMDTILKQL GIVKISIGDV QKLEWEVVEG KIRKWIRAAK VCVRIVFSSE KRLCSDLFDE PMDATCFMET VKTSALRLFT FPEAISISRR SPEKLFKILD
301: LHDAMGDMMP DIEAIFDSDD DSSSSRAVYL QAGEIQTRLA EAARGILSEF ENAVLREPSV VPVPGGTIHP LTRYVMNYIS LISDYKQTLN NLIVSDPSTG
401: SDPNPNAPVI DFTELDGKSP LALHLIWLIM VLHFNLEEKS HHYRDASLAH IFIMNNIHYI VQKVKGSPEL REMIGDHYLR KLTGIFRHAA TNYQRSTWVR
501: VLNSLRDEGL HVSGSFSSGV SRSALRERFK AFNAMLEDVH RSQSTWSVPD AQLREELRIS LSEHLIPAYR SFLGRFRGNI ESGRHPENYL KYSVEDIDRI
601: VLDFFEGIEP FFEFLFTG
001: MEPPENSLDS DGSNLETAER IILRWDSAAT DGARGKMIFQ SDRDEVDRFL RAVDEIQRSL SSVSFSSSSS SAATSAATVV DEHEVKANSA IQIAMARLED
101: EFRNILLSHT TTFEPDSLFL EEPSVSPSLT VEVGEDTTVT PEEEELNSPG GSGSSRLTRR RSSYRSTSSI REMDLISPEA VSDLRSIVQR MVAAGYSREC
201: IQVYGTVRKS AMEAIFKQLG IVKISIGDVQ RLEWEVVEGK IRKWIRAAKV CIRVVFSSEK RLCEQLFDGI CTAMDETCFM ETVKASALRL FTFPEAISIS
301: RRSPEKLFKI LDLHDALTDM LPDIEAIFDS DSSDAIRAQA VEIQSRLAEA ARGILSEFEN AVLREPSIVP VPGGTIHPLT RYVMNYIVMI SDYKQTLDDL
401: IMSNPSTGSD PNTPDMDFTE LDSKSPLDLH LIWLIVVLHF NLEEKSKHYR DTSLAHIFIM NNIHYIVQKV KRSPELREMI GDHYLRKLTG IFRHAATNYQ
501: RATWVRVLNS LRDEGLHVSG SFSSGVSRSA LRERFKAFNT MFEEVHRTQS TWSVPDAQLR EELRISLSEH LIPAYRSFLG RFRGHIESGR HPENYLKYSV
601: EDIETIVLDF FEGYTTPPHL RRR
101: EFRNILLSHT TTFEPDSLFL EEPSVSPSLT VEVGEDTTVT PEEEELNSPG GSGSSRLTRR RSSYRSTSSI REMDLISPEA VSDLRSIVQR MVAAGYSREC
201: IQVYGTVRKS AMEAIFKQLG IVKISIGDVQ RLEWEVVEGK IRKWIRAAKV CIRVVFSSEK RLCEQLFDGI CTAMDETCFM ETVKASALRL FTFPEAISIS
301: RRSPEKLFKI LDLHDALTDM LPDIEAIFDS DSSDAIRAQA VEIQSRLAEA ARGILSEFEN AVLREPSIVP VPGGTIHPLT RYVMNYIVMI SDYKQTLDDL
401: IMSNPSTGSD PNTPDMDFTE LDSKSPLDLH LIWLIVVLHF NLEEKSKHYR DTSLAHIFIM NNIHYIVQKV KRSPELREMI GDHYLRKLTG IFRHAATNYQ
501: RATWVRVLNS LRDEGLHVSG SFSSGVSRSA LRERFKAFNT MFEEVHRTQS TWSVPDAQLR EELRISLSEH LIPAYRSFLG RFRGHIESGR HPENYLKYSV
601: EDIETIVLDF FEGYTTPPHL RRR
Arabidopsis Description
ATEXO70D3EXO70D3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7V7]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.