Factsheet for Zm00001d050972_P005

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050095_P001	Maize	cytosol	40.05	79.39
EES13957	Sorghum	cytosol	39.73	78.01
Zm00001d032075_P001	Maize	cytosol	39.16	77.02
TraesCS7B01G182000.2	Wheat	cytosol	36.1	70.11
TraesCS7D01G290600.1	Wheat	cytosol	36.26	69.98
TraesCS7A01G290900.2	Wheat	cytosol	35.94	69.47
Zm00001d005816_P001	Maize	cytosol	32.96	64.21
Zm00001d020617_P001	Maize	cytosol	32.8	63.79
GSMUA_Achr10P...	Banana	cytosol	28.12	59.56
GSMUA_Achr9P14390_001	Banana	cytosol	26.67	58.48
HORVU7Hr1G064400.2	Barley	cytosol	30.86	54.4
CDY02484	Canola	cytosol	13.13	53.97
PGSC0003DMT400012539	Potato	extracellular	24.42	50.84
GSMUA_Achr10P...	Banana	cytosol	22.97	50.8
Solyc06g062990.1.1	Tomato	cytosol	24.34	50.67
PGSC0003DMT400058947	Potato	cytosol	24.42	49.84
CDY28574	Canola	cytosol	10.72	49.26
KRH47637	Soybean	endoplasmic reticulum	24.58	48.72
Solyc03g122240.2.1	Tomato	nucleus	22.97	48.63
VIT_09s0002g00910.t01	Wine grape	cytosol	23.53	48.18
Bra003879.1-P	Field mustard	cytosol, nucleus, plastid	23.21	48.08
CDY50639	Canola	cytosol	23.29	47.45
CDX68265	Canola	cytosol	23.29	47.45
AT1G72470.1	Thale cress	nucleus	23.53	46.13
Bra027373.1-P	Field mustard	cytoskeleton, cytosol, nucleus	22.72	45.63
CDX97543	Canola	cytoskeleton, cytosol, nucleus	22.64	45.47
AT3G14090.1	Thale cress	cytoskeleton, cytosol, nucleus	22.72	45.26
KRH06215	Soybean	cytosol	24.25	45.13
CDY52262	Canola	cytoskeleton, cytosol, nucleus	23.21	44.58
AT1G54090.1	Thale cress	nucleus	22.32	44.53
Bra030907.1-P	Field mustard	cytosol	22.64	44.39
CDY61474	Canola	cytosol	17.32	42.32
Os08t0455700-01	Rice	cytosol	1.05	36.11
Zm00001d042331_P001	Maize	cytosol, plastid	13.78	30.0
Zm00001d038447_P001	Maize	plastid	13.94	29.78
Zm00001d012020_P001	Maize	cytosol	15.63	28.87
Zm00001d001765_P001	Maize	mitochondrion	14.42	27.93
Zm00001d000403_P001	Maize	extracellular	15.15	27.69
Zm00001d052779_P001	Maize	cytosol, mitochondrion	13.86	27.13
Zm00001d025206_P001	Maize	cytosol	14.91	26.35
Zm00001d031614_P001	Maize	cytosol	12.65	26.12
Zm00001d010602_P001	Maize	extracellular, mitochondrion, plasma membrane	13.78	25.83
Zm00001d043365_P001	Maize	peroxisome	12.49	24.26
Zm00001d023472_P001	Maize	cytosol	12.01	23.76
Zm00001d004846_P001	Maize	cytosol, plastid	12.97	23.54
Zm00001d053192_P001	Maize	cytosol, plastid	12.73	23.13
Zm00001d041908_P001	Maize	plastid	12.41	22.75
Zm00001d023513_P001	Maize	plastid	12.41	22.55
Zm00001d023469_P001	Maize	cytosol	11.2	20.59
Zm00001d043015_P001	Maize	mitochondrion	13.7	15.77

Protein Annotations

KEGG:00900+1.1.1.34	Gene3D:1.10.287.110	Gene3D:1.10.3270.10	MapMan:22.1.6.4	MapMan:22.6.3.1	Gene3D:3.10.20.90
Gene3D:3.30.70.420	ProteinID:AQK53388.1	InterPro:AUX/IAA_dom	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145
GO:GO:0003674	GO:GO:0003824	GO:GO:0004420	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0006810	GO:GO:0006887	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987	GO:GO:0015936	GO:GO:0016020
GO:GO:0016021	GO:GO:0016616	GO:GO:0050662	GO:GO:0055114	InterPro:HMG_CoA_Rdtase	InterPro:HMG_CoA_Rdtase_N
InterPro:HMG_CoA_Rdtase_NAD(P)-bd_sf	InterPro:HMG_CoA_Rdtase_sub-bd_dom_sf	InterPro:IPR002202	InterPro:IPR009023	InterPro:IPR023282	InterPro:IPR036869
InterPro:J_dom_sf	UniProt:K7U5R7	PFAM:PF00368	PFAM:PF02309	PFAM:PF03081	PRINTS:PR00071
PFscan:PS50065	PANTHER:PTHR12542	PANTHER:PTHR12542:SF27	SUPFAM:SSF46565	SUPFAM:SSF55035	SUPFAM:SSF56542
SUPFAM:SSF74788	TMHMM:TMhelix	UniParc:UPI0002218558	EnsemblPlantsGene:Zm00001d050972	EnsemblPlants:Zm00001d050972_P005	EnsemblPlants:Zm00001d050972_T005
SEG:seg	:	:	:	:	:

Description

Aux/IAA-transcription factor 173-hydroxy-3-methylglutaryl-coenzyme A reductase 2

Coordinates

chr4:+:134412290..134423581

Molecular Weight (calculated)

136651.0 Da

IEP (calculated)

7.598

GRAVY (calculated)

-0.126

Length

1241 amino acids

Sequence
(BLAST)

0001: MDGSAAELEA AKRVVMQWDS SLACGGADEP MLFDGGGNRA KADRFLRAVD DLHRLAPPSP AAVGSLRRLS SSSTARSGAM LVAMTQLEDE FRHVLSSRAV
0101: DHEIEALTYL SLLSINADRS NSASSADLPA ADEDDSVFSS IGHRSTAYRS LRSIREIDLL PDDVIADLRA IASCMAAAGH DRECAQVYSS VRKPAVDASL
0201: RRLGVERLSI GDVQRLEWDA LEAKIRRWIR AAVRGVFASE RRLCFHIFHD LPISAASVPA THDTPFAEAV KGAALQLFGF AEAINIGHRS PKYLFKIIDL
0301: HDAAEIQTRL ADAVRGIFSE FENTVLRDPP KTAVPGGTVH PLTRYVMNYS SLICDYKATL SELIVSRPSA SARLAAEGNE LASSLADLEL PELENQLPLA
0401: SHIVWIIVIL EHNLEGKAAL YKDPALSHLF MMNNVHYIVH KVKDSSDLWG MIADDYLKRL TGKFTMAATN YQHASWLKIL NCLRDEGLHV SGGFLSGISK
0501: SALRERFKSF NATFEDMHRV EEITWVKNLY IRKLVLVFGL DFFYPDRSPT SKPDAPYGYG GPSHGSAPRR QQATGGEGQR VRVQAGDVLP LPIWHTNLIF
0601: SVLFAASLVY LMRRWREKIR ASTPLHVVSL AEIFAICGLV ASLIYLLSFF GIAFVQSVVS NSNDEEDFII DSCHGQARAP PPPAPAAPCA LLGSLASVPE
0701: KMPEEDEEIV AVVVAGKIPS YVLETRLGDC RWAAGIKWEA LRRITGREMD GIPLDGFDYA SILSQCCELP VGFVQLPVGV TDPLLLDGRR LYVPMATTEG
0801: CLVASTNRGC KAIAESSGAS SVVLNDGMTR APAVRSSRFG RLQGVKCVIT GRNLYMRFSC STGDAMGMKM VSKGVQNVLD YLQADFPDMD VINISGVLMQ
0901: YSRSNLFGMQ YSRKRYFVLE DAALRCFKST SSSKGESAPS SKGGFFHGVR SLSFGVDLQE IRLMGVLQVK CGVRGDTSSG CNAVGMIDRK ILGIQHLYGR
1001: PVYARSKNYR KNTLAASSSR RKAPAEDATS TAQTMYVKVS MDDAPYLKMV DIKMYSNYED LSMALEKMFN CFIIGEYCSV LCFCLMHFPL VSTASSNAIS
1101: AKELSSYRCF QIMFPSTLQG TGENWTMMKT ICVTEYLNYK GGEAGQNKKR QRIGDTLDFE IKRWSTGKQG NLRALLSTLQ YIRPSDKKVD YQIQKLTNAA
1201: NNATAREKSG NAEANGKDGH SDEEDLLKYR PNPDMMDTDW S

Best Arabidopsis Sequence Match ( AT1G72470.1 )
(BLAST)

001: MEPHDQTHGG DGGEGENCSV SGFDSAEKVI IRWDATASEE AREKMIFNDP QEVNLYLNAV DEIQKYVSSG GEIENRANSA IQIAMARLED EFRNILVSHS
101: SPINSDSLML SSSSSSHLEV DEDGSSSNNG NEEDDQQEEE ETDLLKRSGS SASTGSATVR LPTGRGSYSR STSSIREIEL IPIESVIHLS WIARRMVSAG
201: YLRECIQVYG SVRKSAVDSS FRRLGIEKLS IGDVQRLNWE ALEQKIRRWI RAAKICVRVV FASEKLLCEH VFESVGAVNI HEACFMETVK GPAIQLFNFA
301: EAISISRRSP EKLFKILDLH DALIELLPDI ESVFDLKSSD SIRVQAAEIL SRLAEAARGI LSEFENAVLR EPSRVPVPGG TIHPLTRYVM NYISLISEYR
401: PTLIDLIMSK PSRNATDSNT PDFDFSELEN NKGPLALHLI WIIVILQFNL EGKSKYYKNA ALSHLFIMNN AHYIVQKIKG SPELREMIGD LYLRKLTGKF
501: RQAATYYQRA AWVKVLYCLR DEGLHTKGSF SSGVSRSALR ERFKSFNALF EEVHRVQSQW LVPDSQLREE LKISILEKLS PAYRSFLGRF RSHIESGKHP
601: ENYIKISVED LETEVLDLFE GYSATQHLRR RSE

Arabidopsis Description

ATEXO70D1Exocyst subunit exo70 family protein D1 [Source:UniProtKB/TrEMBL;Acc:Q9C9E5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.