Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, cytoskeleton
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027373.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 83.95 | 84.63 |
| CDX97543 | Canola | cytoskeleton, cytosol, nucleus | 82.99 | 83.66 |
| CDY52262 | Canola | cytoskeleton, cytosol, nucleus | 83.31 | 80.34 |
| AT1G54090.1 | Thale cress | nucleus | 73.03 | 73.15 |
| AT1G72470.1 | Thale cress | nucleus | 64.85 | 63.82 |
| GSMUA_Achr9P14390_001 | Banana | cytosol | 54.57 | 60.07 |
| GSMUA_Achr10P... | Banana | cytosol | 56.02 | 59.56 |
| Os08t0455700-01 | Rice | cytosol | 3.37 | 58.33 |
| OQU89565 | Sorghum | cytosol | 55.38 | 55.47 |
| Os09t0439600-01 | Rice | cytosol | 55.86 | 54.55 |
| EES13957 | Sorghum | cytosol | 55.06 | 54.27 |
| Zm00001d005816_P001 | Maize | cytosol | 55.22 | 54.0 |
| TraesCS5B01G210700.1 | Wheat | cytosol | 51.69 | 53.94 |
| Zm00001d020617_P001 | Maize | cytosol | 55.06 | 53.76 |
| TraesCS5A01G213100.1 | Wheat | cytosol | 51.52 | 53.68 |
| Zm00001d032075_P001 | Maize | cytosol | 54.25 | 53.57 |
| TraesCS5D01G218900.1 | Wheat | cytosol | 51.36 | 53.24 |
| Zm00001d050095_P001 | Maize | cytosol | 52.81 | 52.56 |
| TraesCS7B01G182000.2 | Wheat | cytosol | 53.61 | 52.27 |
| TraesCS7D01G290600.1 | Wheat | cytosol | 53.93 | 52.26 |
| TraesCS7A01G290900.2 | Wheat | cytosol | 53.61 | 52.02 |
| GSMUA_Achr10P... | Banana | cytosol | 46.39 | 51.52 |
| HORVU5Hr1G062200.3 | Barley | cytosol | 55.86 | 49.5 |
| HORVU7Hr1G064400.2 | Barley | cytosol | 47.67 | 42.19 |
| AT5G50380.1 | Thale cress | nucleus | 39.17 | 35.72 |
| AT3G29400.1 | Thale cress | cytosol | 32.91 | 31.16 |
| AT5G58430.1 | Thale cress | cytosol | 30.5 | 30.45 |
| AT5G13150.1 | Thale cress | nucleus | 31.14 | 29.71 |
| AT5G52340.1 | Thale cress | cytosol | 29.86 | 29.48 |
| AT5G03540.3 | Thale cress | cytosol | 31.3 | 29.37 |
| AT2G28650.1 | Thale cress | plastid | 26.48 | 28.8 |
| AT1G07000.1 | Thale cress | cytosol | 27.45 | 28.55 |
| AT2G39380.1 | Thale cress | plastid | 28.25 | 27.63 |
| AT5G13990.1 | Thale cress | nucleus | 30.82 | 27.63 |
| AT3G55150.1 | Thale cress | plastid | 28.09 | 27.52 |
| AT3G09520.1 | Thale cress | cytosol | 27.61 | 27.39 |
| AT2G28640.1 | Thale cress | mitochondrion | 26.48 | 27.27 |
| AT5G61010.1 | Thale cress | cytosol | 27.45 | 26.76 |
| AT1G07725.1 | Thale cress | cytosol, nucleus, plastid | 26.0 | 26.34 |
| AT5G52350.1 | Thale cress | cytosol | 24.24 | 25.77 |
| AT3G09530.1 | Thale cress | mitochondrion | 25.84 | 25.27 |
| AT5G59730.1 | Thale cress | cytosol, plastid | 25.68 | 25.24 |
| Zm00001d050972_P005 | Maize | cytosol, peroxisome, plasma membrane | 45.26 | 22.72 |
Protein Annotations
| MapMan:22.6.3.1 | EntrezGene:820625 | UniProt:A0A178V7V7 | ProteinID:AEE75467.1 | ArrayExpress:AT3G14090 | EnsemblPlantsGene:AT3G14090 |
| RefSeq:AT3G14090 | TAIR:AT3G14090 | RefSeq:AT3G14090-TAIR-G | EnsemblPlants:AT3G14090.1 | TAIR:AT3G14090.1 | Symbol:ATEXO70D3 |
| ProteinID:BAB02973.1 | InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
| RefSeq:NP_566477.2 | ProteinID:OAP01751.1 | PFAM:PF03081 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000282 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020131 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR12542 |
| PANTHER:PTHR12542:SF27 | UniProt:Q9LJH9 | SUPFAM:SSF74788 | UniParc:UPI00000A13E5 | SEG:seg | : |
Description
ATEXO70D3EXO70D3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7V7]
Coordinates
chr3:-:4669197..4671796
Molecular Weight (calculated)
70549.7 Da
IEP (calculated)
5.451
GRAVY (calculated)
-0.303
Length
623 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPPENSLDS DGSNLETAER IILRWDSAAT DGARGKMIFQ SDRDEVDRFL RAVDEIQRSL SSVSFSSSSS SAATSAATVV DEHEVKANSA IQIAMARLED
101: EFRNILLSHT TTFEPDSLFL EEPSVSPSLT VEVGEDTTVT PEEEELNSPG GSGSSRLTRR RSSYRSTSSI REMDLISPEA VSDLRSIVQR MVAAGYSREC
201: IQVYGTVRKS AMEAIFKQLG IVKISIGDVQ RLEWEVVEGK IRKWIRAAKV CIRVVFSSEK RLCEQLFDGI CTAMDETCFM ETVKASALRL FTFPEAISIS
301: RRSPEKLFKI LDLHDALTDM LPDIEAIFDS DSSDAIRAQA VEIQSRLAEA ARGILSEFEN AVLREPSIVP VPGGTIHPLT RYVMNYIVMI SDYKQTLDDL
401: IMSNPSTGSD PNTPDMDFTE LDSKSPLDLH LIWLIVVLHF NLEEKSKHYR DTSLAHIFIM NNIHYIVQKV KRSPELREMI GDHYLRKLTG IFRHAATNYQ
501: RATWVRVLNS LRDEGLHVSG SFSSGVSRSA LRERFKAFNT MFEEVHRTQS TWSVPDAQLR EELRISLSEH LIPAYRSFLG RFRGHIESGR HPENYLKYSV
601: EDIETIVLDF FEGYTTPPHL RRR
101: EFRNILLSHT TTFEPDSLFL EEPSVSPSLT VEVGEDTTVT PEEEELNSPG GSGSSRLTRR RSSYRSTSSI REMDLISPEA VSDLRSIVQR MVAAGYSREC
201: IQVYGTVRKS AMEAIFKQLG IVKISIGDVQ RLEWEVVEGK IRKWIRAAKV CIRVVFSSEK RLCEQLFDGI CTAMDETCFM ETVKASALRL FTFPEAISIS
301: RRSPEKLFKI LDLHDALTDM LPDIEAIFDS DSSDAIRAQA VEIQSRLAEA ARGILSEFEN AVLREPSIVP VPGGTIHPLT RYVMNYIVMI SDYKQTLDDL
401: IMSNPSTGSD PNTPDMDFTE LDSKSPLDLH LIWLIVVLHF NLEEKSKHYR DTSLAHIFIM NNIHYIVQKV KRSPELREMI GDHYLRKLTG IFRHAATNYQ
501: RATWVRVLNS LRDEGLHVSG SFSSGVSRSA LRERFKAFNT MFEEVHRTQS TWSVPDAQLR EELRISLSEH LIPAYRSFLG RFRGHIESGR HPENYLKYSV
601: EDIETIVLDF FEGYTTPPHL RRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.