CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 1
cytosol 2
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053192_P001	Maize	cytosol, plastid	90.25	90.78
Zm00001d004846_P001	Maize	cytosol, plastid	89.23	89.62
Os11t0167600-00	Rice	plasma membrane	73.8	73.27
HORVU4Hr1G020050.1	Barley	cytosol, plastid	74.09	71.89
TraesCS4A01G208500.1	Wheat	cytosol	73.22	71.05
TraesCS4D01G109600.1	Wheat	cytosol	72.93	70.56
TraesCS4B01G112100.1	Wheat	cytosol	72.49	70.14
EES16704	Sorghum	plastid	64.34	63.32
CDX97230	Canola	cytosol	17.32	62.96
CDX69666	Canola	cytosol	17.18	62.43
GSMUA_Achr6P07200_001	Banana	nucleus	49.93	51.89
Bra023443.1-P	Field mustard	cytosol	32.17	50.69
GSMUA_Achr6P25750_001	Banana	endoplasmic reticulum	48.91	47.93
VIT_01s0146g00160.t01	Wine grape	nucleus	44.25	46.48
GSMUA_Achr6P18090_001	Banana	nucleus	31.0	46.2
PGSC0003DMT400052043	Potato	nucleus	44.1	43.41
Solyc05g024340.1.1	Tomato	cytosol	35.95	41.72
PGSC0003DMT400006075	Potato	cytosol	35.95	41.72
CDY69943	Canola	cytosol	37.99	41.63
Bra006183.1-P	Field mustard	nucleus	37.85	41.47
Solyc02g094370.1.1	Tomato	cytosol	42.94	41.32
CDX78509	Canola	nucleus	37.7	41.31
Bra008852.1-P	Field mustard	nucleus	37.55	40.19
AT5G13150.1	Thale cress	nucleus	37.7	39.66
KRH70050	Soybean	nucleus	40.76	39.49
Solyc01g009880.2.1	Tomato	nucleus	37.85	39.16
PGSC0003DMT400013431	Potato	nucleus	37.85	39.16
KRH06895	Soybean	cytosol	39.88	38.43
CDY09840	Canola	cytosol, nucleus, plastid	38.14	38.19
AT5G13990.1	Thale cress	nucleus	38.57	38.13
CDX69615	Canola	cytosol, nucleus, plastid	37.99	38.1
KRG94595	Soybean	nucleus	39.3	37.97
Bra008789.1-P	Field mustard	cytosol, nucleus, plastid	37.7	37.92
KRH36360	Soybean	cytosol	33.33	37.85
CDX85618	Canola	nucleus	38.28	37.68
CDX78551	Canola	nucleus	36.68	37.0
CDX70532	Canola	nucleus	36.54	36.8
Bra006228.1-P	Field mustard	nucleus	36.39	36.71
CDX91088	Canola	cytosol, nucleus, vacuole	36.83	32.77
KRG93132	Soybean	cytosol	22.42	32.77
OQU82911	Sorghum	cytosol	22.42	31.82
EES15315	Sorghum	cytosol	26.06	29.88
OQU89565	Sorghum	cytosol	26.93	29.74
EES13957	Sorghum	cytosol	27.22	29.59
OQU87774	Sorghum	cytosol	27.37	29.1
EES13134	Sorghum	cytosol	26.06	28.32
EES01976	Sorghum	cytosol	27.07	28.27
EES19684	Sorghum	cytosol	26.06	26.84
EES05115	Sorghum	cytosol	26.49	26.69
EES01688	Sorghum	cytosol	20.52	26.45
KXG26069	Sorghum	cytosol	26.49	26.0
GSMUA_Achr10P...	Banana	cytosol	29.4	25.96
KXG33434	Sorghum	peroxisome	22.42	25.41
KXG23006	Sorghum	cytosol	22.71	24.72

Protein Annotations

Gene3D:1.20.1280.170	MapMan:22.6.3.1	EntrezGene:8073608	UniProt:C5Y588	ncoils:Coil	InterPro:Cullin_repeat-like_dom_sf
EnsemblPlants:EES08037	ProteinID:EES08037	ProteinID:EES08037.1	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150
GO:GO:0009987	PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF81	EnsemblPlantsGene:SORBI_3005G049200	SUPFAM:SSF74788
UniParc:UPI0001A862BD	RefSeq:XP_002449049.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:4697160..4699223

Molecular Weight (calculated)

74954.8 Da

IEP (calculated)

5.166

GRAVY (calculated)

-0.300

Length

687 amino acids

Sequence
(BLAST)

001: MDRIPVAPLK SSSFSAATSR EEKLARNLSL GPIKLTEHIK EAHKEKAAAS DAGPDEAAEP DLAALSAEID AFLAAPRDGD APPPAVSEVT LDRFASAVEQ
101: EIAQSEGTDN KWAPNEAGDA PPLLAAIKRL AALASALTAD QGAATYSIGV HRVTGVLHRA MTFVEDEFHG TLEDPRVAKV APPAGDTGSA TGRSMKRPPS
201: FGQGAELDRC VVPTAFCDAS PPFPPETVGR LRAMAEAMFA AGYETECTQV FLVARRNTLD ASLQSLGYDK ASIDDVVKMP WEALESEIAT WIKAFRHTVE
301: VDLPGERDLC ARVFAVAGQR SLGRDIFADL AHCAMLHLLN FTEAVVLTKR AAEKLFKVLD MYEAVRDAVP MVDKFLVPPP DGEGEGAGAP AADEDGGSGS
401: ASTALAEIKH ELASVCTRLG ESAAAIFCDL ECSIRADAGK QPVPGGAVHP LTRYLMNYLK YACEYKKTME QVFQEYRRPD DDDAQHEGGG GDPFAAQLME
501: VMELLHTNLE GKSRLYKDPS LSSIFLMNNG RYMLQKIRGS PEINAVVGEA WSRKRSTDLR QYHKNYQRET WSRVLNLLRD DGVITVKGHV QKQVLKDRFK
601: QFNAAMDEIQ RTQGSWVVSD EQLQSELRVS IAAVIVPAYR SFLGRFSQHF TAGRQTEKYV KLSGEDLEAI IEELFDGNAV SMPRRRT

Best Arabidopsis Sequence Match ( AT5G13150.1 )
(BLAST)

001: MEKSGNHHHA NESSENHDHK SEDHENKQHS DELHSSTPES QSESSEHSLV EVMEAVVDFI QTLSSEKDPL GEISPAVESF PEAVDSLVSK MESSGLGRDE
101: TEDSVFIDAV NRISKSVMRL RELKLDSTPV SSWLNRASSV QHRAVSLLDE EFRHLLDRSR EEEKKNNNNN NHHDGSNSDH NNSSTNDSDR CVLQDHEEAE
201: EESFHDFSPE SISTLKKIAG AMISAGYEAE CCMSYEMSRR HAFKEELTEV GFEGINVEDV QRIGWESLEG EIASWISIVR RCSTVLFPGE LSLCNAVFPD
301: QDHSSVRKRL FTGLVSAVTI RFLDFSGAVV LTKRSSEKLF KFLDMYETLR DLIPAVEQSD SDLIQEIKLA QTRLGEAAVT IFGELEKSIK SDNGRTPVPS
401: GAVHPLTRYT MNYLKYACEY KETLDQVFQH YEANQTDNKP EPETKPRQQQ REDDEEYKVS AFARQMIRVM ELLDANLEIK SRLYRDPSLR FIFLMNNGRY
501: ILQKIKGSIE IRDLMGQSWT RKRSTELRQY HKSYQRETWG KVLQCMNQEG LQVNGKVSKP VLKERFKIFN AMFDEIHKTQ STWIVSDEQM QSELRVSISS
601: LVIPAYRSFF GRYKQHLDSG KQTDKYVKYQ PEDIESFIDD LFDGNPTSMA RKR

Arabidopsis Description

ATEXO70C1Exocyst subunit exo70 family protein C1 [Source:UniProtKB/TrEMBL;Acc:Q9FY95]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.