Factsheet for PGSC0003DMT400006075

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g024340.1.1	Tomato	cytosol	95.78	95.78
CDX97230	Canola	cytosol	21.79	68.25
CDX69666	Canola	cytosol	21.45	67.2
PGSC0003DMT400013431	Potato	nucleus	66.22	59.04
VIT_01s0146g00160.t01	Wine grape	nucleus	55.41	50.15
Os12t0165600-01	Rice	cytosol, plasma membrane	37.84	45.81
Bra006183.1-P	Field mustard	nucleus	47.64	44.98
CDY69943	Canola	cytosol	47.64	44.98
CDX78509	Canola	nucleus	47.47	44.82
KRH36360	Soybean	cytosol	44.59	43.64
AT5G13150.1	Thale cress	nucleus	47.97	43.49
Bra008852.1-P	Field mustard	nucleus	46.62	42.99
GSMUA_Achr6P07200_001	Banana	nucleus	45.78	41.0
PGSC0003DMT400052043	Potato	nucleus	47.13	39.97
TraesCS5B01G122500.1	Wheat	plastid	43.58	38.97
GSMUA_Achr6P25750_001	Banana	endoplasmic reticulum	45.78	38.66
Zm00001d023513_P001	Maize	plastid	43.41	37.63
Zm00001d041908_P001	Maize	plastid	42.91	37.52
Zm00001d053192_P001	Maize	cytosol, plastid	42.74	37.04
Zm00001d004846_P001	Maize	cytosol, plastid	42.74	36.99
EES16704	Sorghum	plastid	43.58	36.96
KRG93132	Soybean	cytosol	29.22	36.81
EES08037	Sorghum	cytosol, plastid	41.72	35.95
TraesCS4B01G112100.1	Wheat	cytosol	43.07	35.92
HORVU4Hr1G020050.1	Barley	cytosol, plastid	42.91	35.88
Os11t0167600-00	Rice	plasma membrane	41.89	35.84
TraesCS4D01G109600.1	Wheat	cytosol	42.57	35.49
TraesCS4A01G208500.1	Wheat	cytosol	42.23	35.31
TraesCS5D01G130800.1	Wheat	plastid	42.91	35.28
TraesCS5A01G122400.1	Wheat	mitochondrion	43.41	34.78
GSMUA_Achr6P18090_001	Banana	nucleus	26.35	33.84
PGSC0003DMT400012539	Potato	extracellular	32.09	31.88
PGSC0003DMT400065456	Potato	cytosol	32.77	30.94
PGSC0003DMT400058947	Potato	cytosol	31.25	30.43
HORVU5Hr1G039240.1	Barley	plastid	35.98	29.26
PGSC0003DMT400090181	Potato	cytosol	31.76	28.19
PGSC0003DMT400043775	Potato	cytosol	27.2	28.15
PGSC0003DMT400072333	Potato	cytosol	28.04	25.94
PGSC0003DMT400032221	Potato	nucleus	27.87	24.96
PGSC0003DMT400003687	Potato	nucleus	27.03	24.32
PGSC0003DMT400028204	Potato	plastid	24.16	23.95
PGSC0003DMT400063083	Potato	cytosol	25.68	23.94
PGSC0003DMT400078145	Potato	mitochondrion	25.17	23.88
PGSC0003DMT400040200	Potato	plastid	23.14	22.72
PGSC0003DMT400060448	Potato	plastid	24.83	22.69
PGSC0003DMT400061435	Potato	plastid	23.99	22.08
PGSC0003DMT400061436	Potato	plastid	23.82	21.93
PGSC0003DMT400061494	Potato	plastid	23.48	21.89
GSMUA_Achr10P...	Banana	cytosol	26.52	20.18

Protein Annotations

Gene3D:1.20.1280.170	EntrezGene:102600732	MapMan:22.6.3.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887
GO:GO:0008150	GO:GO:0009987	UniProt:M0ZQS8	PFAM:PF03081	EnsemblPlantsGene:PGSC0003DMG400002359	PGSC:PGSC0003DMG400002359
EnsemblPlants:PGSC0003DMT400006075	PANTHER:PTHR12542	PANTHER:PTHR12542:SF15	SUPFAM:SSF74788	UniParc:UPI00029596CF	RefSeq:XP_006359082.1

Description

ATEXO70C1 [Source:PGSC_GENE;Acc:PGSC0003DMG400002359]

Coordinates

chr5:-:15989623..15991573

Molecular Weight (calculated)

67851.8 Da

IEP (calculated)

6.134

GRAVY (calculated)

-0.452

Length

592 amino acids

Sequence
(BLAST)

001: MEKSGTTPIC EDIDLNRFKN TVSTSHDDDD PSSQLPENVE IFSKIIESRI AKCNSGETPT RLGKMTEEES FFLEAVMHLS KLTNVIAKSP SGSTLLSRTN
101: IVLKQAMTFM EEELRTLLED FGGNSNSKVD KKSQIEDYPW YPPEVVIRMN RIATTMISAG FETACCQVYS ISRRNAFYEQ MKMLEFEKIN VDDVQKMSWD
201: SLEGEITRWI NVARNCSNTL FLAERRLGES VFSASPMISQ SLFNNLARSI VIQILDFAEA VSWTKRSAEK LFKYLDIYDT IRDLIHAISE SLSINDCEHE
301: LKSEILATRD RFGDAVINIF NDLEISIKND AARTPVPGGA VHPLTRYVMN YLKYACEYKD ALEHIFKEHT ATSPSKLKSS VDEAESESPH ENVVAETTPL
401: TVQLMTIMEL LDANLEAKSN LYRDTSLRDI FLMNNGRYIL QKAKGSTEVR QVMGDTWCRR RSTTVRQYHK NYQRETWGKL LQILNHDGMQ VNGKVTKPIV
501: KERFKNFSTM LDEIHRTQST WVVSDEQLRS ELRVSISAVL IPAYRSFCGR FRQYLDNTKH ADKYIKYQPE DIETLVEGLF DGNPTSMARR KT

Best Arabidopsis Sequence Match ( AT5G13150.1 )
(BLAST)

001: MEKSGNHHHA NESSENHDHK SEDHENKQHS DELHSSTPES QSESSEHSLV EVMEAVVDFI QTLSSEKDPL GEISPAVESF PEAVDSLVSK MESSGLGRDE
101: TEDSVFIDAV NRISKSVMRL RELKLDSTPV SSWLNRASSV QHRAVSLLDE EFRHLLDRSR EEEKKNNNNN NHHDGSNSDH NNSSTNDSDR CVLQDHEEAE
201: EESFHDFSPE SISTLKKIAG AMISAGYEAE CCMSYEMSRR HAFKEELTEV GFEGINVEDV QRIGWESLEG EIASWISIVR RCSTVLFPGE LSLCNAVFPD
301: QDHSSVRKRL FTGLVSAVTI RFLDFSGAVV LTKRSSEKLF KFLDMYETLR DLIPAVEQSD SDLIQEIKLA QTRLGEAAVT IFGELEKSIK SDNGRTPVPS
401: GAVHPLTRYT MNYLKYACEY KETLDQVFQH YEANQTDNKP EPETKPRQQQ REDDEEYKVS AFARQMIRVM ELLDANLEIK SRLYRDPSLR FIFLMNNGRY
501: ILQKIKGSIE IRDLMGQSWT RKRSTELRQY HKSYQRETWG KVLQCMNQEG LQVNGKVSKP VLKERFKIFN AMFDEIHKTQ STWIVSDEQM QSELRVSISS
601: LVIPAYRSFF GRYKQHLDSG KQTDKYVKYQ PEDIESFIDD LFDGNPTSMA RKR

Arabidopsis Description

ATEXO70C1Exocyst subunit exo70 family protein C1 [Source:UniProtKB/TrEMBL;Acc:Q9FY95]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.