Factsheet for VIT_00s0379g00070.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane

Predictor Summary:

nucleus 3
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000221_P001	Maize	cytosol	27.73	78.07
Os07t0619800-02	Rice	cytosol, plasma membrane	83.18	58.94
TraesCS2D01G173100.1	Wheat	cytosol	82.55	55.67
CDY69753	Canola	cytosol, plastid	84.42	50.75
VIT_03s0063g00940.t01	Wine grape	cytosol	92.21	50.68
KRH57894	Soybean	cytosol, plastid	89.1	49.48
KRH28502	Soybean	cytosol, mitochondrion	86.29	48.77
PGSC0003DMT400001990	Potato	cytosol	88.47	48.14
Solyc02g065070.2.1	Tomato	cytosol	87.85	47.72
GSMUA_Achr1P21380_001	Banana	cytosol	90.03	47.61
CDY65651	Canola	cytosol	84.74	46.5
Bra036089.1-P	Field mustard	cytosol	85.98	46.46
CDY52824	Canola	cytosol	85.98	46.46
Solyc02g090510.2.1	Tomato	nucleus	87.85	46.46
Zm00001d006885_P002	Maize	cytosol	82.87	46.34
GSMUA_Achr2P07660_001	Banana	cytosol	87.54	46.29
KRH76957	Soybean	plastid	86.92	46.19
CDY65016	Canola	cytosol	85.05	45.96
EER99712	Sorghum	cytosol	82.55	44.09
PGSC0003DMT400026076	Potato	cytosol	87.85	43.99
TraesCS2A01G165800.1	Wheat	cytosol, plastid	82.55	43.95
TraesCS2B01G191800.1	Wheat	cytosol	82.55	43.87
AT3G50530.2	Thale cress	plastid	85.67	43.51
VIT_00s0577g00010.t01	Wine grape	plasma membrane	71.96	42.78
VIT_08s0040g01250.t01	Wine grape	cytosol, plastid, vacuole	73.83	39.97
Zm00001d022166_P001	Maize	cytosol	65.73	36.82
VIT_15s0048g02840.t01	Wine grape	cytosol	65.73	35.7
VIT_16s0098g01140.t01	Wine grape	cytosol	65.11	35.3
VIT_04s0023g03420.t01	Wine grape	plastid	50.16	28.85
VIT_17s0000g05520.t01	Wine grape	cytosol	37.69	28.07
HORVU2Hr1G030520.1	Barley	cytosol	42.37	27.47
VIT_08s0007g08300.t01	Wine grape	cytosol	38.63	23.57
VIT_08s0105g00390.t01	Wine grape	cytosol	38.01	23.15
VIT_06s0004g02300.t01	Wine grape	cytosol	36.14	22.39
VIT_05s0102g00170.t01	Wine grape	cytosol	37.69	21.84

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100264733	wikigene:100264733	MapMan:18.4.5.5	ProteinID:CBI29399
ProteinID:CBI29399.3	UniProt:D7TFX6	InterPro:EF-hand-dom_pair	EMBL:FN595774	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100264733	wikigene:LOC100264733	PFAM:PF00069	PFscan:PS50011
PANTHER:PTHR24349	PANTHER:PTHR24349:SF115	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112
UniParc:UPI0001BE2F25	ArrayExpress:VIT_00s0379g00070	EnsemblPlantsGene:VIT_00s0379g00070	EnsemblPlants:VIT_00s0379g00070.t01	unigene:Vvi.20145	RefSeq:XP_002262855
RefSeq:XP_002262855.2	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:26593554..26596440

Molecular Weight (calculated)

36291.7 Da

IEP (calculated)

7.933

GRAVY (calculated)

-0.176

Length

321 amino acids

Sequence
(BLAST)

001: NFLFTSKDEN SQLKAIDFGL SDFVKPDERL NDIVGSAYYV APEVLHRSYT TEADVWSIGV IAYILLCGSR PFWARTESGI FRAVLKADPS FDEPPWPSLS
101: SEARDFVRRL LNKDPRKRMT AAQALCHPWI KNNDIKVPLD ILILKLMKAY MRSSSLRKAA LRALSKTLTV DELCYLKEQF ALLEPNKNGT ISLENIRAAL
201: MKNATDAMKE SRVHDLLASL NALQYRRMDF EEFCAATLSV HQLEALDRWE QHARCAYELF EKDGNRAIVI EELASELGLG PSVPVHAVLH DWIRHTDGKL
301: SFLGFAKLLH GVSSRALAKA Q

Best Arabidopsis Sequence Match ( AT3G50530.1 )
(BLAST)

001: MGLCTSKPNS SNSDQTPARN SPLPASESVK PSSSSVNGED QCVTTTNNEG KKSPFFPFYS PSPAHYFFSK KTPARSPATN STNSTPKRFF KRPFPPPSPA
101: KHIRAVLARR HGSVKPNSSA IPEGSEAEGG GVGLDKSFGF SKSFASKYEL GDEVGRGHFG YTCAAKFKKG DNKGQQVAVK VIPKAKMTTA IAIEDVRREV
201: KILRALSGHN NLPHFYDAYE DHDNVYIVME LCEGGELLDR ILSRGGKYTE EDAKTVMIQI LNVVAFCHLQ GVVHRDLKPE NFLFTSKEDT SQLKAIDFGL
301: SDYVRPDERL NDIVGSAYYV APEVLHRSYS TEADIWSVGV IVYILLCGSR PFWARTESGI FRAVLKADPS FDDPPWPLLS SEARDFVKRL LNKDPRKRLT
401: AAQALSHPWI KDSNDAKVPM DILVFKLMRA YLRSSSLRKA ALRALSKTLT VDELFYLREQ FALLEPSKNG TISLENIKSA LMKMATDAMK DSRIPEFLGQ
501: LSALQYRRMD FEEFCAAALS VHQLEALDRW EQHARCAYEL FEKEGNRPIM IDELASELGL GPSVPVHAVL HDWLRHTDGK LSFLGFVKLL HGVSSRTIKA
601: H

Arabidopsis Description

CRKCDPK-related kinase [Source:TAIR;Acc:AT3G50530]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.