Factsheet for VIT_06s0004g02300.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002237.1-P	Field mustard	cytosol	72.97	79.08
VIT_08s0007g08300.t01	Wine grape	cytosol	78.19	77.0
AT5G19450.2	Thale cress	cytosol	78.38	76.17
Bra020040.1-P	Field mustard	cytosol	78.19	75.84
CDY44918	Canola	cytosol	78.19	75.84
PGSC0003DMT400027809	Potato	cytosol	77.99	75.8
PGSC0003DMT400083474	Potato	cytosol	77.8	75.75
CDY14001	Canola	cytosol	77.41	75.66
CDY42266	Canola	cytosol	77.99	75.66
Solyc11g065660.1.1	Tomato	cytosol	77.8	75.61
AT5G12480.1	Thale cress	plastid	77.99	75.51
CDX97205	Canola	cytosol	77.8	75.33
CDX92529	Canola	cytosol	77.61	75.28
Solyc01g008440.2.1	Tomato	cytosol	77.41	75.23
Bra008879.1-P	Field mustard	cytosol	77.22	75.19
CDY53966	Canola	cytosol	77.22	75.19
GSMUA_Achr3P29750_001	Banana	cytosol	72.39	74.4
GSMUA_Achr4P06930_001	Banana	cytosol	68.15	72.63
GSMUA_Achr4P13880_001	Banana	cytosol	73.94	72.54
GSMUA_AchrUn_...	Banana	cytosol	69.69	72.34
GSMUA_Achr8P31440_001	Banana	cytosol	70.66	71.91
GSMUA_Achr2P07790_001	Banana	cytosol	69.69	70.78
Zm00001d011666_P001	Maize	cytosol, plasma membrane	48.07	70.14
Zm00001d006621_P006	Maize	cytosol	72.78	69.94
TraesCS2A01G199700.1	Wheat	cytosol	73.17	69.8
Os07t0568600-01	Rice	cytosol, plasma membrane	73.94	69.64
TraesCS2B01G227000.1	Wheat	cytosol	72.78	69.43
TraesCS2D01G207400.1	Wheat	cytosol	72.78	69.43
Zm00001d029018_P001	Maize	plasma membrane	47.49	69.3
EER99568	Sorghum	cytosol	72.2	68.88
Zm00001d021835_P001	Maize	cytosol	71.62	68.83
Zm00001d029163_P001	Maize	cytosol	24.9	66.84
VIT_17s0000g05520.t01	Wine grape	cytosol	54.25	65.2
VIT_08s0105g00390.t01	Wine grape	cytosol	65.25	64.14
Zm00001d031188_P002	Maize	cytosol	44.4	57.07
VIT_05s0102g00170.t01	Wine grape	cytosol	59.65	55.78
Zm00001d028016_P001	Maize	cytosol	38.22	45.0
VIT_00s0379g00070.t01	Wine grape	cytosol, plasma membrane	22.39	36.14
VIT_04s0023g03420.t01	Wine grape	plastid	37.84	35.13
VIT_03s0063g00940.t01	Wine grape	cytosol	38.03	33.73
VIT_15s0048g02840.t01	Wine grape	cytosol	37.26	32.66
VIT_08s0040g01250.t01	Wine grape	cytosol, plastid, vacuole	37.07	32.38
VIT_16s0098g01140.t01	Wine grape	cytosol	36.1	31.59
VIT_00s0577g00010.t01	Wine grape	plasma membrane	17.37	16.67

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100267353	wikigene:100267353	MapMan:18.4.5.4	Gene3D:3.30.200.20
ProteinID:CBI16361	ProteinID:CBI16361.3	UniProt:D7SL33	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
EMBL:FN594951	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004683
GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719
GO:GO:0009738	GO:GO:0009931	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	InterPro:IPR000719	InterPro:IPR002048
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100267353	wikigene:LOC100267353	PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF126	InterPro:Prot_kinase_dom
SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001BE10F3
ArrayExpress:VIT_06s0004g02300	EnsemblPlantsGene:VIT_06s0004g02300	EnsemblPlants:VIT_06s0004g02300.t01	RefSeq:XP_002282757	RefSeq:XP_002282757.2	:

Description

No Description!

Coordinates

chr6:+:2714924..2721335

Molecular Weight (calculated)

58579.4 Da

IEP (calculated)

6.361

GRAVY (calculated)

-0.447

Length

518 amino acids

Sequence
(BLAST)

001: MGNCCASPGS EKENPYLIDY NVLHGSVSRN RGPVLKDPTG RDISLKYELG REMGRGEFGV TYMCTEKSTN EKYACKSIAK KKLRTAVDIE DVRREVQIMK
101: RLPMHPNIVS LKDTFEDENA VHIVMELCEG GELFDRIVSR GHYTERAAAG VMRTIVEVVQ ICHKHGVMHR DLKPENFLFA NKKEAAPLKI IDFGLSVDFK
201: HGERFSEIVG SPYYMAPEVL KHNYGPEIDI WSAGVILYIL LCGIPPFWAE TEQGVAQAII RAVVDFKRDP WPKVSDKAKE LVKKMLDPDP KKRLTAQEVL
301: DHPWLQDAKS VPNVSLGESV KARLKQFSMM NKLKKKALQV MAEHLSMEEV AGIKEAFKTM DINNRGQINL DELRSGLQKL GQPIPDSDLQ ILMEAADLDG
401: DGTLNYAEFV AVSIHIKKIT NEEHLHKAFA FFDQNQSGYI EIEELQNALA DELSTNSEEV INAIMHDVDT DKDGRISYEE FAAMMKAGTD WRKASRQYSR
501: ERFNTLSLKL TRDGKDGQ

Best Arabidopsis Sequence Match ( AT5G19450.2 )
(BLAST)

001: MGNCCASPGS ETGSKKGKPK IKSNPFYSEA YTTNGSGTGF KLSVLKDPTG HDISLMYDLG REVGRGEFGI TYLCTDIKTG EKYACKSISK KKLRTAVDIE
101: DVRREVEIMK HMPRHPNIVS LKDAFEDDDA VHIVMELCEG GELFDRIVAR GHYTERAAAA VMKTILEVVQ ICHKHGVMHR DLKPENFLFA NKKETSALKA
201: IDFGLSVFFK PGEGFNEIVG SPYYMAPEVL RRNYGPEVDI WSAGVILYIL LCGVPPFWAE TEQGVAQAII RSVIDFKRDP WPRVSETAKD LVRKMLEPDP
301: KKRLSAAQVL EHSWIQNAKK APNVSLGETV KARLKQFSVM NKLKKRALRV IAEHLSVEEV AGIKEAFEMM DSKKTGKINL EELKFGLHKL GQQQIPDTDL
401: QILMEAADVD GDGTLNYGEF VAVSVHLKKM ANDEHLHKAF SFFDQNQSDY IEIEELREAL NDEVDTNSEE VVAAIMQDVD TDKDGRISYE EFAAMMKAGT
501: DWRKASRQYS RERFNSLSLK LMREGSLQLE GEN

Arabidopsis Description

CPK8Calcium-dependent protein kinase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q42438]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.