Factsheet for VIT_16s0098g01140.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0048g02840.t01	Wine grape	cytosol	74.83	74.96
KRH64343	Soybean	cytosol	74.49	73.87
Solyc03g082500.2.1	Tomato	nucleus	74.16	73.41
KRH53593	Soybean	cytosol	73.65	72.79
PGSC0003DMT400008340	Potato	cytosol	73.31	72.58
GSMUA_Achr9P20900_001	Banana	cytosol	65.54	71.45
GSMUA_Achr7P05810_001	Banana	cytosol	65.37	70.75
GSMUA_Achr3P12500_001	Banana	cytosol	64.53	70.74
GSMUA_Achr1P04170_001	Banana	cytosol	63.85	69.49
GSMUA_AchrUn_...	Banana	cytosol	62.33	68.84
GSMUA_Achr2P03380_001	Banana	cytosol	62.33	68.59
Zm00001d036416_P001	Maize	plasma membrane	69.93	68.09
TraesCS7A01G384500.1	Wheat	cytosol	71.11	67.68
TraesCS7D01G380900.1	Wheat	cytosol	70.95	67.52
TraesCS7B01G287100.1	Wheat	cytosol	70.95	67.52
HORVU7Hr1G091360.1	Barley	cytosol	70.95	67.42
KXG20873	Sorghum	cytosol	70.95	67.2
CDX87128	Canola	cytosol	65.71	67.07
Bra036512.1-P	Field mustard	cytosol	65.71	67.07
CDY19836	Canola	cytosol	65.54	66.9
Os06t0714200-01	Rice	plasma membrane	70.1	66.61
AT5G24430.1	Thale cress	cytosol	66.05	65.82
AT3G49370.1	Thale cress	cytosol	65.54	65.32
VIT_00s0379g00070.t01	Wine grape	cytosol, plasma membrane	35.3	65.11
TraesCS1A01G178400.1	Wheat	cytosol	69.09	64.92
HORVU1Hr1G047350.2	Barley	cytosol	68.75	64.91
TraesCS1D01G176900.1	Wheat	cytosol	68.75	64.6
CDX88104	Canola	cytosol	63.51	64.49
TraesCS1B01G201900.1	Wheat	cytosol	68.41	64.29
CDX80445	Canola	cytosol	63.18	64.15
KXG38195	Sorghum	cytosol	69.26	63.96
Bra017989.1-P	Field mustard	cytosol	63.85	63.96
Bra009765.1-P	Field mustard	cytosol	61.32	63.8
Zm00001d014773_P001	Maize	cytosol	59.29	63.7
CDY08129	Canola	cytosol	64.02	63.7
CDY05930	Canola	cytosol	63.85	63.21
Zm00001d032473_P001	Maize	cytosol	58.11	61.98
VIT_03s0063g00940.t01	Wine grape	cytosol	60.14	60.96
CDX86978	Canola	cytosol	65.54	59.78
Bra019593.1-P	Field mustard	cytosol	65.37	59.45
CDY00200	Canola	cytosol	65.54	59.42
Zm00001d013868_P001	Maize	cytosol	52.36	58.49
VIT_08s0040g01250.t01	Wine grape	cytosol, plastid, vacuole	57.09	57.0
CDX87112	Canola	cytosol	27.53	56.21
Os10t0510700-00	Rice	plasma membrane	69.26	56.16
VIT_04s0023g03420.t01	Wine grape	plastid	40.88	43.37
VIT_06s0004g02300.t01	Wine grape	cytosol	31.59	36.1
VIT_08s0007g08300.t01	Wine grape	cytosol	30.91	34.79
VIT_17s0000g05520.t01	Wine grape	cytosol	25.0	34.34
VIT_08s0105g00390.t01	Wine grape	cytosol	30.41	34.16
VIT_05s0102g00170.t01	Wine grape	cytosol	30.57	32.67
VIT_00s0577g00010.t01	Wine grape	plasma membrane	28.55	31.3
TraesCS4A01G458300.1	Wheat	cytosol	63.18	22.82

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100246879	wikigene:100246879	MapMan:18.4.5.5	Gene3D:3.30.200.20
ProteinID:CCB48080	ProteinID:CCB48080.1	InterPro:EF-hand-dom_pair	UniProt:F6H757	EMBL:FN595247	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004683	GO:GO:0005488	GO:GO:0005515
GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009931	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556
GO:GO:0046777	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100246879	wikigene:LOC100246879	PFAM:PF00069
PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF186
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TIGR:TC69588	UniParc:UPI00015CB67E	ArrayExpress:VIT_16s0098g01140	EnsemblPlantsGene:VIT_16s0098g01140	EnsemblPlants:VIT_16s0098g01140.t01	unigene:Vvi.11307
unigene:Vvi.24533	RefSeq:XP_002273024	RefSeq:XP_002273024.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr16:+:21384997..21390652

Molecular Weight (calculated)

65869.3 Da

IEP (calculated)

9.435

GRAVY (calculated)

-0.292

Length

592 amino acids

Sequence
(BLAST)

001: MGHCCSKDIS VVKDDTVAGE SAAGIGGKPT APLRLVGNGA VDVKRTPAHS FNSPCPSPYP QGSSPLPPGI APSPARTPRS RVRWPFPPPS PAKPIMSSIL
101: KRRGSAKPKE GPIPEEGAGE GETQLDKSFG YAKNFSSKFE LGKEVGRGHF GHTCWARGKK GELKGQTVAV KIISKAKMTT AIAIEDVRRE VKILKALSVH
201: KNLVKFHDAC EDASNVYIIM ELCEGGELLD RILSRGGRYR EEDAKAIVVQ ILNVVAFCHL QGVVHRDLKP ENFLFTTRDE DAPMKVIDFG LSDFIRTDQR
301: LNDIVGSAYY VAPEVLHRSY NLEADVWSIG VITYILLCGS RPFWARTESG IFRSVLRADP NFDDLPWPAV SPEAKDFVKR LLNKDYRKRM TAAQALTHPW
401: LRDENHAVPL DILVYKLVKS YVRVSPFKRA ALKALSKALT EDELVYLRAQ FRLLEPKNGR VSLENFKMAL MRNATDAMKE SRVADILNMM ESLSFKKMDF
501: EEFCAAAISP LQLEALQGWE KIATTGFEFF EQEGNRVTTV EELAREMNVG PAAYSAFNGW IRSSDGKLSF LGFTKFLHGS VSRPITRQQQ HV

Best Arabidopsis Sequence Match ( AT2G46700.1 )
(BLAST)

001: MGQCYGKVNQ SKQNGEEEAN TTTYVVSGDG NQIQPLTPVN YGRAKNTPAR SSNPSPWPSP FPHGSASPLP SGVSPSPART STPRRFFRRP FPPPSPAKHI
101: KASLIKRLGV KPKEGPIPEE RGTEPEQSLD KSFGYGKNFG AKYELGKEVG RGHFGHTCSG RGKKGDIKDH PIAVKIISKA KMTTAIAIED VRREVKLLKS
201: LSGHKYLIKY YDACEDANNV YIVMELCDGG ELLDRILARG GKYPEDDAKA IVVQILTVVS FCHLQGVVHR DLKPENFLFT SSREDSDLKL IDFGLSDFIR
301: PDERLNDIVG SAYYVAPEVL HRSYSLEADI WSIGVITYIL LCGSRPFWAR TESGIFRTVL RTEPNYDDVP WPSCSSEGKD FVKRLLNKDY RKRMSAVQAL
401: THPWLRDDSR VIPLDILIYK LVKAYLHATP LRRAALKALA KALTENELVY LRAQFMLLGP NKDGSVSLEN FKTALMQNAT DAMRESRVPE ILHTMESLAY
501: RKMYFEEFCA AAISIHQLEA VDAWEEIATA GFQHFETEGN RVITIEELAR ELNVGASAYG HLRDWVRSSD GKLSYLGFTK FLHGVTLRAA HARPR

Arabidopsis Description

CRK3CDPK-related kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUZ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.