Factsheet for VIT_04s0023g03420.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08079	Soybean	plastid	78.14	82.58
CDY71104	Canola	cytosol	20.61	82.14
KRH69782	Soybean	plastid	77.42	81.51
GSMUA_Achr2P00480_001	Banana	cytosol	42.29	80.0
GSMUA_Achr1P08900_001	Banana	plastid	76.7	79.85
Bra012058.1-P	Field mustard	plastid	75.99	79.85
CDY45213	Canola	plastid	75.99	79.85
PGSC0003DMT400009177	Potato	plastid	80.65	79.79
KRH28800	Soybean	plastid	80.11	79.54
Solyc03g033540.2.1	Tomato	extracellular	80.47	79.47
AT5G66210.1	Thale cress	plastid	74.37	79.35
PGSC0003DMT400058126	Potato	plastid	80.65	79.23
KRH76656	Soybean	plastid	79.75	79.18
GSMUA_Achr8P19290_001	Banana	cytosol	74.91	79.02
EER98402	Sorghum	cytosol	72.76	78.99
Os07t0409900-01	Rice	plasma membrane	72.4	78.91
Solyc02g083850.2.1	Tomato	plastid	80.47	78.77
Zm00001d005164_P001	Maize	cytosol	72.04	78.52
CDY30782	Canola	plastid	73.48	78.39
HORVU4Hr1G078080.2	Barley	cytosol	37.1	78.11
CDY18593	Canola	plastid	75.27	77.92
TraesCS6A01G089400.2	Wheat	cytosol	71.33	77.89
TraesCS6B01G111800.1	Wheat	cytosol	71.33	77.89
Bra037181.1-P	Field mustard	plastid	75.09	77.88
TraesCS2D01G245700.1	Wheat	cytosol	70.97	77.8
TraesCS2A01G239900.1	Wheat	cytosol	70.97	77.8
TraesCSU01G016900.1	Wheat	cytosol	71.33	77.73
CDX81407	Canola	plastid	75.27	77.63
Os02t0126400-01	Rice	cytosol	71.51	76.44
HORVU6Hr1G014700.6	Barley	cytosol, mitochondrion, plastid	71.33	75.95
Zm00001d015100_P002	Maize	plastid	70.25	75.1
KXG29360	Sorghum	plastid	70.61	75.05
GSMUA_Achr5P18720_001	Banana	plastid	73.48	72.31
VIT_00s0379g00070.t01	Wine grape	cytosol, plasma membrane	28.85	50.16
VIT_03s0063g00940.t01	Wine grape	cytosol	46.24	44.18
VIT_08s0040g01250.t01	Wine grape	cytosol, plastid, vacuole	44.62	41.99
VIT_15s0048g02840.t01	Wine grape	cytosol	43.73	41.29
VIT_16s0098g01140.t01	Wine grape	cytosol	43.37	40.88
VIT_17s0000g05520.t01	Wine grape	cytosol	30.65	39.68
VIT_08s0007g08300.t01	Wine grape	cytosol	36.56	38.78
VIT_06s0004g02300.t01	Wine grape	cytosol	35.13	37.84
VIT_08s0105g00390.t01	Wine grape	cytosol	34.95	37.0
VIT_05s0102g00170.t01	Wine grape	cytosol	35.66	35.92
VIT_00s0577g00010.t01	Wine grape	plasma membrane	24.01	24.81

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100248850	wikigene:100248850	MapMan:18.4.5.4	Gene3D:3.30.200.20
EMBL:AM443708	ProteinID:CAN69589	ProteinID:CAN69589.1	ProteinID:CBI17375	ProteinID:CBI17375.3	UniProt:D7SNZ6
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EMBL:FN594959	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004683	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515
GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009931	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556
GO:GO:0046777	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100248850	wikigene:LOC100248850
PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF246	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC62151	UniParc:UPI00015CB340
ArrayExpress:VIT_04s0023g03420	EnsemblPlantsGene:VIT_04s0023g03420	EnsemblPlants:VIT_04s0023g03420.t01	unigene:Vvi.3222	RefSeq:XP_002267099	RefSeq:XP_002267099.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4:+:20005369..20011421

Molecular Weight (calculated)

62992.9 Da

IEP (calculated)

9.579

GRAVY (calculated)

-0.632

Length

558 amino acids

Sequence
(BLAST)

001: MGACLSATKV RSSNSNTTAN AAATKNTRPR GSSKTSNKNQ QKKPQEGDRN RSNQQHRNPQ PQKVKDRANG RRGTGIIPCG KRTDFGYAKD FDARYTIGKL
101: LGHGQFGYTY VATDKANGDR VAVKRIEKNK MILPIAVEDV KREVKILEAL TGHENVVQFH NAFEDDSYVY IVMELCEGGE LLDRILAKKD SRYSEKDAAK
201: VVRQMLKVAA ECHLHGLVHR DMKPENFLFK STKEDSPLKA TDFGLSDFIK PGKKFQDIVG SAYYVAPEVL RRKSGPESDV WSIGVITYIL LCGKRPFWDK
301: TEDGIFKEVL KNKPDFRRKP WPTISNGAKD FVKKLLVKDP RARLTAAQAL SHPWVREGGD ASEIPIDISV LSNMREFVKY SHLKQFALRA LASTLDDEEL
401: ADLRDQFDAI DVDKNGSISL EEMRQALAKD LPWKMKESRV LEILQAIDSN TDGLVDFTEF VAATLHVHQL EEHDSDKWRQ RSQAAFDKFD VDRDGFITPE
501: ELKLHTGLRG SIDPLLEEAD IDKDGRISLA EFRRLLRTAS ISSRQVPSSS GFRNPRKI

Best Arabidopsis Sequence Match ( AT2G17890.1 )
(BLAST)

001: MGLCFSSAAK SSGHNRSSRN PHPHPPLTVV KSRPPRSPCS FMAVTIQKDH RTQPRRNATA KKTPTRHTPP HGKVREKVIS NNGRRHGETI PYGKRVDFGY
101: AKDFDHRYTI GKLLGHGQFG YTYVATDKKT GDRVAVKKID KAKMTIPIAV EDVKREVKIL QALTGHENVV RFYNAFEDKN SVYIVMELCE GGELLDRILA
201: RKDSRYSERD AAVVVRQMLK VAAECHLRGL VHRDMKPENF LFKSTEEDSP LKATDFGLSD FIKPGKKFHD IVGSAYYVAP EVLKRRSGPE SDVWSIGVIS
301: YILLCGRRPF WDKTEDGIFK EVLKNKPDFR RKPWPTISNS AKDFVKKLLV KDPRARLTAA QALSHPWVRE GGDASEIPID ISVLNNMRQF VKFSRLKQFA
401: LRALATTLDE EELADLRDQF DAIDVDKNGV ISLEEMRQAL AKDHPWKLKD ARVAEILQAI DSNTDGFVDF GEFVAAALHV NQLEEHDSEK WQQRSRAAFE
501: KFDIDGDGFI TAEELRMHTG LKGSIEPLLE EADIDNDGKI SLQEFRRLLR TASIKSRNVR SPPGYLISRK V

Arabidopsis Description

CPK16Calcium-dependent protein kinase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJR9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.