Factsheet for PGSC0003DMT400058126

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g033540.2.1	Tomato	extracellular	97.18	97.7
PGSC0003DMT400009177	Potato	plastid	86.97	87.59
KRH08079	Soybean	plastid	76.76	82.58
KRH69782	Soybean	plastid	75.88	81.32
CDY45213	Canola	plastid	75.53	80.79
VIT_04s0023g03420.t01	Wine grape	plastid	79.23	80.65
Bra012058.1-P	Field mustard	plastid	75.35	80.6
AT5G66210.1	Thale cress	plastid	73.94	80.31
CDY71104	Canola	cytosol	19.72	80.0
GSMUA_Achr2P00480_001	Banana	cytosol	41.55	80.0
Bra037181.1-P	Field mustard	plastid	75.35	79.55
Zm00001d005164_P001	Maize	cytosol	71.65	79.49
CDY18593	Canola	plastid	75.35	79.41
TraesCS2D01G245700.1	Wheat	cytosol	71.13	79.37
CDY30782	Canola	plastid	73.06	79.35
TraesCS2A01G239900.1	Wheat	cytosol	70.77	78.98
Os07t0409900-01	Rice	plasma membrane	71.13	78.91
KRH76656	Soybean	plastid	77.99	78.83
KRH28800	Soybean	plastid	77.82	78.65
CDX81407	Canola	plastid	74.82	78.56
EER98402	Sorghum	cytosol	70.95	78.4
HORVU4Hr1G078080.2	Barley	cytosol	36.44	78.11
GSMUA_Achr1P08900_001	Banana	plastid	73.59	77.99
TraesCS6B01G111800.1	Wheat	cytosol	69.72	77.5
TraesCS6A01G089400.2	Wheat	cytosol	69.72	77.5
TraesCSU01G016900.1	Wheat	cytosol	69.72	77.34
GSMUA_Achr8P19290_001	Banana	cytosol	71.65	76.94
Os02t0126400-01	Rice	cytosol	69.89	76.05
KXG29360	Sorghum	plastid	69.89	75.62
HORVU6Hr1G014700.6	Barley	cytosol, mitochondrion, plastid	69.72	75.57
Zm00001d015100_P002	Maize	plastid	69.19	75.29
GSMUA_Achr5P18720_001	Banana	plastid	72.01	72.13
PGSC0003DMT400066365	Potato	cytosol	44.89	43.37
PGSC0003DMT400001990	Potato	cytosol	44.37	42.71
PGSC0003DMT400021598	Potato	mitochondrion	42.96	42.51
PGSC0003DMT400008340	Potato	cytosol	42.61	40.47
PGSC0003DMT400021055	Potato	cytosol	36.44	39.5
PGSC0003DMT400026076	Potato	cytosol	44.01	39.0
PGSC0003DMT400027809	Potato	cytosol	35.56	37.9
PGSC0003DMT400083474	Potato	cytosol	35.39	37.78
PGSC0003DMT400069175	Potato	plastid	34.33	36.38
PGSC0003DMT400034291	Potato	cytosol	34.15	36.06

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:102577666	MapMan:18.4.5.4	Gene3D:3.30.200.20	ProteinID:AAC78558
ProteinID:AAC78558.1	EMBL:AF030879	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf
UniProt:M1C256	PFAM:PF00069	PFAM:PF13499	EnsemblPlantsGene:PGSC0003DMG400022562	PGSC:PGSC0003DMG400022562	EnsemblPlants:PGSC0003DMT400058126
ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349
PANTHER:PTHR24349:SF246	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002951143	RefSeq:XP_006343369.1	SEG:seg	:

Description

Calcium-dependent protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400022562]

Coordinates

chr3:-:3572573..3580399

Molecular Weight (calculated)

64176.1 Da

IEP (calculated)

9.374

GRAVY (calculated)

-0.630

Length

568 amino acids

Sequence
(BLAST)

001: MGSCFSSSKV SGSNSNTPST NNTATNTNTT VNVHPNRRET SKAPSTTVVN SRNQEGSNYN RGKGNINQKN QQKQPRNSQQ NVKPSSRRQG GVIPCGKRTD
101: FGYDKDFEKR YTIGKLLGHG QFGYTYVATD KSSGDRVAVK RIEKNKMVLP IAVEDVKREV KILKALGGHE NVVQFYNSFE DDNYVYIVME LCEGGELLDR
201: ILSKKDSRYT EKDAAIVVRQ MLKVAAECHL HGLVHRDMKP ENFLFKSTKE DSPLKATDFG LSDFIRPGKK FQDIVGSAYY VAPEVLKRRS GPESDVWSIG
301: VITYILLCGR RPFWDKTEDG IFKEVLRNKP DFRRKPWSNI SNSAKDFVKK LLVKDPRARL TAAQALSHPW VREGGDASEI PLDISVLSNM RQFVRYSHLK
401: QFALRALAST LDEEEIADLR DQFSAIDVDK NGVISLEEMR QALAKDLPWK MKESRVLEIL QAIDSNTDGL VDFPEFVAAT LHVHQLEEHN SAKWQQRSQA
501: AFEKFDVDRD GFITPEELKM HTGLRGSIDP LLEEADIDKD GKISISEFRR LLRTASMSSP TVRDSRGM

Best Arabidopsis Sequence Match ( AT2G17890.1 )
(BLAST)

001: MGLCFSSAAK SSGHNRSSRN PHPHPPLTVV KSRPPRSPCS FMAVTIQKDH RTQPRRNATA KKTPTRHTPP HGKVREKVIS NNGRRHGETI PYGKRVDFGY
101: AKDFDHRYTI GKLLGHGQFG YTYVATDKKT GDRVAVKKID KAKMTIPIAV EDVKREVKIL QALTGHENVV RFYNAFEDKN SVYIVMELCE GGELLDRILA
201: RKDSRYSERD AAVVVRQMLK VAAECHLRGL VHRDMKPENF LFKSTEEDSP LKATDFGLSD FIKPGKKFHD IVGSAYYVAP EVLKRRSGPE SDVWSIGVIS
301: YILLCGRRPF WDKTEDGIFK EVLKNKPDFR RKPWPTISNS AKDFVKKLLV KDPRARLTAA QALSHPWVRE GGDASEIPID ISVLNNMRQF VKFSRLKQFA
401: LRALATTLDE EELADLRDQF DAIDVDKNGV ISLEEMRQAL AKDHPWKLKD ARVAEILQAI DSNTDGFVDF GEFVAAALHV NQLEEHDSEK WQQRSRAAFE
501: KFDIDGDGFI TAEELRMHTG LKGSIEPLLE EADIDNDGKI SLQEFRRLLR TASIKSRNVR SPPGYLISRK V

Arabidopsis Description

CPK16Calcium-dependent protein kinase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJR9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.