Factsheet for PGSC0003DMT400034291

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400014123
PGSC0003DMT400018569
PGSC0003DMT400034833
PGSC0003DMT400042062
PGSC0003DMT400046278
PGSC0003DMT400054299
PGSC0003DMT400058435
PGSC0003DMT400070437
PGSC0003DMT400097662

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G74740.1	PGSC0003DMT400014123	AT2G41090.1	17360592
AT1G74740.1	PGSC0003DMT400018569	AT2G41090.1	17360592
AT1G74740.1	PGSC0003DMT400046278	AT2G41090.1	17360592
AT1G74740.1	PGSC0003DMT400054299	AT2G41090.1	17360592
AT1G74740.1	PGSC0003DMT400058435	AT2G41090.1	17360592
AT1G74740.1	PGSC0003DMT400070437	AT2G41090.1	17360592
AT1G74740.1	PGSC0003DMT400097662	AT2G41090.1	17360592
AT1G74740.1	PGSC0003DMT400014123	AT2G41100.1	17360592
AT1G74740.1	PGSC0003DMT400018569	AT2G41100.1	17360592
AT1G74740.1	PGSC0003DMT400046278	AT2G41100.1	17360592
AT1G74740.1	PGSC0003DMT400054299	AT2G41100.1	17360592
AT1G74740.1	PGSC0003DMT400058435	AT2G41100.1	17360592
AT1G74740.1	PGSC0003DMT400070437	AT2G41100.1	17360592
AT1G74740.1	PGSC0003DMT400097662	AT2G41100.1	17360592
AT1G74740.1	PGSC0003DMT400034833	AT4G14640.1	17360592
AT1G74740.1	PGSC0003DMT400042062	AT4G14640.1	17360592
AT1G74740.1	PGSC0003DMT400014123	AT5G21274.1	17360592
AT1G74740.1	PGSC0003DMT400018569	AT5G21274.1	17360592
AT1G74740.1	PGSC0003DMT400046278	AT5G21274.1	17360592
AT1G74740.1	PGSC0003DMT400054299	AT5G21274.1	17360592
AT1G74740.1	PGSC0003DMT400058435	AT5G21274.1	17360592
AT1G74740.1	PGSC0003DMT400070437	AT5G21274.1	17360592
AT1G74740.1	PGSC0003DMT400097662	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g113390.2.1	Tomato	cytosol	99.44	99.44
VIT_17s0000g05520.t01	Wine grape	cytosol	69.33	86.54
GSMUA_Achr2P17730_001	Banana	cytosol	62.27	83.13
KRH63420	Soybean	cytosol	83.64	80.94
AT1G74740.1	Thale cress	cytosol	81.23	80.78
KRH54494	Soybean	cytosol	82.34	80.4
KRH03406	Soybean	cytosol	80.67	80.22
KRH56973	Soybean	cytosol	80.3	80.15
AT1G18890.1	Thale cress	cytosol, plastid	81.04	80.0
Bra015896.1-P	Field mustard	cytosol	80.86	79.67
CDY45391	Canola	cytosol	80.67	79.49
CDX81903	Canola	cytosol, plastid	80.11	79.37
Bra031055.1-P	Field mustard	cytosol, plastid	78.25	79.28
CDX73108	Canola	cytosol	80.48	79.16
CDY21691	Canola	cytosol, plastid	80.11	78.79
Bra025696.1-P	Field mustard	cytosol, plastid	71.38	72.73
CDY26714	Canola	cytosol	80.3	70.94
CDY19259	Canola	cytosol, plastid	80.48	70.64
PGSC0003DMT400027809	Potato	cytosol	66.91	67.54
PGSC0003DMT400021055	Potato	cytosol	65.43	67.18
TraesCS4D01G027600.1	Wheat	plastid	70.45	66.49
TraesCS4A01G283400.1	Wheat	plastid	70.26	66.43
Os03t0688300-01	Rice	plasma membrane	70.26	65.85
PGSC0003DMT400083474	Potato	cytosol	64.87	65.6
Zm00001d013527_P002	Maize	cytosol, plastid	71.0	65.3
EER93646	Sorghum	plastid	71.0	65.19
TraesCS4B01G030100.1	Wheat	plastid	70.63	63.33
HORVU4Hr1G004540.20	Barley	plastid	69.52	62.13
PGSC0003DMT400069175	Potato	plastid	55.2	55.41
PGSC0003DMT400009177	Potato	plastid	36.99	35.28
PGSC0003DMT400021598	Potato	mitochondrion	37.17	34.84
PGSC0003DMT400001990	Potato	cytosol	37.73	34.41
PGSC0003DMT400058126	Potato	plastid	36.06	34.15
PGSC0003DMT400066365	Potato	cytosol	36.62	33.5
PGSC0003DMT400026076	Potato	cytosol	37.73	31.67
PGSC0003DMT400008340	Potato	cytosol	34.57	31.1

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:102591452	MapMan:18.4.5.4	MapMan:25.1.2.1	Gene3D:3.30.200.20
ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0006950	GO:GO:0006970	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009628	GO:GO:0009987	GO:GO:0010152	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:1902584	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	UniProt:M1B0F6	PFAM:PF00069
PFAM:PF13499	EnsemblPlantsGene:PGSC0003DMG400013183	PGSC:PGSC0003DMG400013183	EnsemblPlants:PGSC0003DMT400034291	ScanProsite:PS00018	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF167	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002955372	RefSeq:XP_006367705.1	SEG:seg	:	:	:

Description

Calcium-dependent protein kinase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400013183]

Coordinates

chr3:+:53333747..53339804

Molecular Weight (calculated)

60912.4 Da

IEP (calculated)

6.851

GRAVY (calculated)

-0.388

Length

538 amino acids

Sequence
(BLAST)

001: MGNCNACIRP EEASKTDPQT KPKKPRERRP NPYSGSPAPI RVLKDFIPKT RISDKYILGR ELGRGEFGVT YLCTDRETRD ALACKSISKK KLRTAVDIED
101: VRREVAIMSS LPDHPNIVKL RATYEDNEAV HLVMELCEGG ELFDRIVARG HYSERAAAGV ARTVAEVVRM CHANGVMHRD LKPENFLFAN KKEHSALKAI
201: DFGLSVFFKP GERFSEIVGS PYYMAPEVLK RNYGPEVDIW SAGVILYILL CGVPPFWAET EQGVALSILR GVIDFKREPW PQVSEKAKSL VRQMLEPDPK
301: KRLTAQQVLD HPWIQNAKKA SNVPLGDIVR TRLKQFSIMN RFKKKALRVI AEHLKLEEIE VIREMFALMD SDGDGKITYD ELKAGLRKVG SQLAEAEMKL
401: LMDVADVDGN GVLDYGEFVA VIIHLQRMEN DEHFRRAFMF FDKDGSGYIE LDELREALAD ESGACDTDVV NEIMREVDTD KDGQISYEEF VGMMKAGTDW
501: RKASRQYSRE RFKSLSVNLM KDGSLQLQDV LSGQTVIV

Best Arabidopsis Sequence Match ( AT1G18890.1 )
(BLAST)

001: MGNCNACVRP DSKESKPSSK PKKPNRDRKL NPFAGDFTRS PAPIRVLKDV IPMSNQTQIS DKYILGRELG RGEFGITYLC TDRETHEALA CKSISKRKLR
101: TAVDIEDVRR EVAIMSTLPE HPNVVKLKAS YEDNENVHLV MELCEGGELF DRIVARGHYT ERAAAAVART IAEVVMMCHS NGVMHRDLKP ENFLFANKKE
201: NSPLKAIDFG LSVFFKPGDK FTEIVGSPYY MAPEVLKRDY GPGVDVWSAG VIIYILLCGV PPFWAETEQG VALAILRGVL DFKRDPWPQI SESAKSLVKQ
301: MLDPDPTKRL TAQQVLAHPW IQNAKKAPNV PLGDIVRSRL KQFSMMNRFK KKVLRVIAEH LSIQEVEVIK NMFSLMDDDK DGKITYPELK AGLQKVGSQL
401: GEPEIKMLME VADVDGNGFL DYGEFVAVII HLQKIENDEL FKLAFMFFDK DGSTYIELDE LREALADELG EPDASVLSDI MREVDTDKDG RINYDEFVTM
501: MKAGTDWRKA SRQYSRERFK SLSINLMKDG SLHLHDALTG QTVPV

Arabidopsis Description

CPK10Calcium-dependent protein kinase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.