Factsheet for PGSC0003DMT400069175

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 3
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g073350.2.1	Tomato	plastid	97.57	97.57
VIT_05s0102g00170.t01	Wine grape	cytosol	68.47	66.25
CDY10809	Canola	cytosol	65.3	65.18
KRH24650	Soybean	mitochondrion, plastid	64.74	65.1
CDY34489	Canola	cytosol	65.3	65.06
KRH29653	Soybean	plastid	64.74	64.02
Bra022844.1-P	Field mustard	cytosol, plastid	64.93	63.27
CDX84782	Canola	cytosol, plastid	64.93	63.27
CDY23939	Canola	cytosol, plastid	64.93	63.27
CDY19084	Canola	plastid	66.23	62.72
CDY15391	Canola	plastid	66.23	61.21
Bra018236.1-P	Field mustard	plastid	66.23	60.79
AT2G31500.1	Thale cress	plastid	65.67	60.48
OQU80791	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	33.21	60.14
Bra021727.1-P	Field mustard	plasma membrane	65.49	59.59
PGSC0003DMT400021055	Potato	cytosol	56.72	58.02
GSMUA_Achr3P21540_001	Banana	cytosol	55.04	57.28
PGSC0003DMT400027809	Potato	cytosol	56.34	56.66
PGSC0003DMT400083474	Potato	cytosol	55.97	56.39
PGSC0003DMT400034291	Potato	cytosol	55.41	55.2
GSMUA_Achr3P19300_001	Banana	cytosol	53.54	54.05
Os12t0230200-02	Rice	plasma membrane	55.6	52.93
TraesCS5A01G118200.1	Wheat	mitochondrion, plastid	54.48	52.8
HORVU5Hr1G029260.2	Barley	mitochondrion	55.04	52.77
TraesCS5B01G112900.1	Wheat	mitochondrion	53.73	52.36
Zm00001d041165_P004	Maize	cytosol, mitochondrion	54.85	52.04
EES15873	Sorghum	mitochondrion	55.04	51.85
Zm00001d024003_P001	Maize	mitochondrion	54.48	51.59
Os08t0540400-01	Rice	plasma membrane	54.1	51.33
TraesCS5A01G298500.1	Wheat	mitochondrion	51.49	50.37
HORVU5Hr1G078430.2	Barley	mitochondrion	52.05	50.36
TraesCS5D01G305200.1	Wheat	mitochondrion	51.49	50.0
TraesCS5B01G297700.1	Wheat	mitochondrion	51.49	50.0
EES04099	Sorghum	cytosol	51.87	49.91
TraesCS7B01G165200.1	Wheat	mitochondrion	52.43	48.7
Os09t0514200-01	Rice	mitochondrion	52.24	48.53
TraesCS7A01G267000.1	Wheat	cytosol, mitochondrion	52.24	48.03
TraesCS7D01G267700.1	Wheat	mitochondrion, plastid	52.05	47.77
Zm00001d052713_P002	Maize	plasma membrane	41.6	47.55
TraesCS5D01G119100.2	Wheat	mitochondrion	51.12	46.05
Zm00001d021139_P008	Maize	cytosol, mitochondrion	49.07	45.82
OQU89769	Sorghum	mitochondrion	25.0	41.23
HORVU7Hr1G056060.7	Barley	cytosol	42.91	41.14
PGSC0003DMT400001990	Potato	cytosol	38.43	34.92
PGSC0003DMT400058126	Potato	plastid	36.38	34.33
PGSC0003DMT400009177	Potato	plastid	35.82	34.04
PGSC0003DMT400066365	Potato	cytosol	36.19	32.99
PGSC0003DMT400021598	Potato	mitochondrion	35.07	32.75
PGSC0003DMT400026076	Potato	cytosol	38.43	32.14
PGSC0003DMT400008340	Potato	cytosol	33.58	30.1

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:102595530	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005509	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009653	GO:GO:0009856
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0030154	GO:GO:0040007	GO:GO:0080092	GO:GO:1901979	InterPro:IPR000719
InterPro:IPR002048	InterPro:Kinase-like_dom_sf	UniProt:M1CK12	PFAM:PF00069	PFAM:PF13499	EnsemblPlantsGene:PGSC0003DMG400026908
PGSC:PGSC0003DMG400026908	EnsemblPlants:PGSC0003DMT400069175	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF160	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295B864	RefSeq:XP_006347286.1
SEG:seg	:	:	:	:	:

Description

Calcium-dependent protein kinase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400026908]

Coordinates

chr6:-:53867876..53872747

Molecular Weight (calculated)

61054.3 Da

IEP (calculated)

6.356

GRAVY (calculated)

-0.380

Length

536 amino acids

Sequence
(BLAST)

001: MGTCMSVQNA SFLKRTRMRP TPIDQETCSK STSRTSVPKS QKFSRPINVV TDPSGDDIYQ RYEFGKELGR GEFGITYQCV DKISGENVAC KTIAKSKLRT
101: EIDVEDVRRE VVIMRHLPKH PNIVSYKEVY EDKEAVYLVM ELCEGGELFD RIVARGHYTE RAAALVTKTI LEVVQVCHKH GVIHRDLKPE NFLYANVNEN
201: AQLKAIDFGL SIFFEPGQRF GEIVGSPYYM APEVLRRNYG PEVDVWSAGV ILYILLCGVP PFWAETEEGI AHAIVKGTID FNRDPWPRVS DEAKDLVKGM
301: LDANPYNRFT VEEVLDHHWI QNADKVSNVC LGEGVRAKIK QFTLMNKFKK KVLRVVADNL PQDQVHGIKQ MFYKMDTDKN GNLSFQELKD GLHMMGQTVA
401: EPEVHLLMDA ADVDGNGMLN CEEFVTMAVH LQRLSNDDHL RHAFLQFDKN KSGFIEFEDL KISLFDDSLA PQNDQVINDI IFGADLDKDG RISYQDFKVM
501: MSTGTDWKMG SRQYSKAMLN ALSMRLFKDK SMQLKN

Best Arabidopsis Sequence Match ( AT2G31500.1 )
(BLAST)

001: MGSCVSSPLK GSPFGKRPVR RRHSSNSRTS SVPRFDSSTN LSRRLIFQPP SRVLPEPIGD GIHLKYDLGK ELGRGEFGVT HECIEISTRE RFACKRISKE
101: KLRTEIDVED VRREVEIMRC LPKHPNIVSF KEAFEDKDAV YLVMEICEGG ELFDRIVSRG HYTERAAASV AKTILEVVKV CHEHGVIHRD LKPENFLFSN
201: GTETAQLKAI DFGLSIFFKP AQRFNEIVGS PYYMAPEVLR RNYGPEIDVW SAGVILYILL CGVPPFWAET EEGIAHAIVR GNIDFERDPW PKVSHEAKEL
301: VKNMLDANPY SRLTVQEVLE HPWIRNAERA PNVNLGDNVR TKIQQFLLMN RFKKKVLRIV ADNLPNEEIA AIVQMFQTMD TDKNGHLTFE ELRDGLKKIG
401: QVVPDGDVKM LMDAADTDGN GMLSCDEFVT LSIHLKRMGC DEHLQEAFKY FDKNGNGFIE LDELKVALCD DKLGHANGND QWIKDIFFDV DLNKDGRISF
501: DEFKAMMKSG TDWKMASRQY SRALLNALSI KMFKEDFGDN GPKSHSMEFP IARKRAKLLD APKNKSMELQ ISKTYKPSGL RN

Arabidopsis Description

CPK24Calcium-dependent protein kinase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIQ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.