Factsheet for TraesCS5B01G112900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G118200.1	Wheat	mitochondrion, plastid	97.09	96.56
HORVU5Hr1G029260.2	Barley	mitochondrion	95.64	94.1
TraesCS5D01G119100.2	Wheat	mitochondrion	90.18	83.36
Zm00001d041165_P004	Maize	cytosol, mitochondrion	84.55	82.3
Zm00001d024003_P001	Maize	mitochondrion	84.18	81.8
EES15873	Sorghum	mitochondrion	84.36	81.55
Os12t0230200-02	Rice	plasma membrane	82.73	80.82
GSMUA_Achr3P19300_001	Banana	cytosol	64.91	67.23
TraesCS5B01G474500.1	Wheat	cytosol	60.0	61.68
TraesCS2B01G227000.1	Wheat	cytosol	58.36	59.12
CDY10809	Canola	cytosol	56.55	57.91
CDY34489	Canola	cytosol	56.55	57.81
TraesCS3B01G383800.1	Wheat	cytosol	56.55	57.38
TraesCS1B01G301600.1	Wheat	cytosol	56.91	57.01
VIT_05s0102g00170.t01	Wine grape	cytosol	57.27	56.86
CDY23939	Canola	cytosol, plastid	56.73	56.73
CDX84782	Canola	cytosol, plastid	56.73	56.73
Bra022844.1-P	Field mustard	cytosol, plastid	56.73	56.73
KRH24650	Soybean	mitochondrion, plastid	54.55	56.29
TraesCS5B01G297700.1	Wheat	mitochondrion	56.0	55.8
KRH29653	Soybean	plastid	54.73	55.54
TraesCS7B01G165200.1	Wheat	mitochondrion	57.64	54.94
Solyc06g073350.2.1	Tomato	plastid	52.91	54.29
CDY19084	Canola	plastid	55.82	54.24
Bra018236.1-P	Field mustard	plastid	57.09	53.77
PGSC0003DMT400069175	Potato	plastid	52.36	53.73
AT2G31500.1	Thale cress	plastid	56.55	53.44
CDY15391	Canola	plastid	56.0	53.1
Bra021727.1-P	Field mustard	plasma membrane	55.45	51.78
TraesCS4B01G030100.1	Wheat	plastid	53.82	49.33
TraesCS6B01G111800.1	Wheat	cytosol	34.73	37.38
TraesCS2B01G171600.1	Wheat	cytosol	34.73	32.21
TraesCS2B01G191800.1	Wheat	cytosol	32.91	29.97
TraesCS7B01G287100.1	Wheat	cytosol	32.36	28.62
TraesCS1B01G201900.1	Wheat	cytosol	32.0	27.94

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF13202	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF160	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS5B01G112900	EnsemblPlants:TraesCS5B01G112900.1	TIGR:cd00051	TIGR:cd05117	SEG:seg	:

Description

No Description!

Coordinates

chr5B:+:177640846..177647588

Molecular Weight (calculated)

61593.1 Da

IEP (calculated)

6.293

GRAVY (calculated)

-0.327

Length

550 amino acids

Sequence
(BLAST)

001: MGNCCVARPS FKRRGGGSPR QRGGRLGGAN LRCLSTVSSV TDTPRATAQP PVTVLGKGLA AADNTEELLQ RYQLGEELGR GEFGVTRRCM DAATGDKLAC
101: KSISKRKLRS SVDIEDVRRE VAIMRSLPSH VNVVRLREAF EDGDSVHLVM EVCEGGELFD RIVVRGHYTE RAAAAVMRTI MEVVQHCHQN GVMHRDLKPE
201: NFLYANASES SPLKVIDFGL SVCFKPGERF SEIVGSPYYM APEVLKRNYG QEIDIWSAGV ILYILLCGVP PFWAETDEGI AQAIIRSHID FEREPWPKVS
301: DNAKDLVSRM LENNPHARLT AQQVLEHPWI QNSTAAPNIP LGEAVRSRLK QFTVMNKFKK KALLVVAEYL PAEELEAITE LFHMLDTNKD GHLTIEELRK
401: GLQMIGNNVH DTDVDMLMEA ADLDGNGTLD CKEFVTVSIH LKKIRSEEHL PKVFNYFDKN MSGFIEMEEL KEALSPRGDQ KAIEEIIFDV DIDKEFELMM
501: KAGVDWRNAS RQYSRAVFNT LSRKMFKDVS LKLDPSGPLG GAGKEQQDII

Best Arabidopsis Sequence Match ( AT2G31500.1 )
(BLAST)

001: MGSCVSSPLK GSPFGKRPVR RRHSSNSRTS SVPRFDSSTN LSRRLIFQPP SRVLPEPIGD GIHLKYDLGK ELGRGEFGVT HECIEISTRE RFACKRISKE
101: KLRTEIDVED VRREVEIMRC LPKHPNIVSF KEAFEDKDAV YLVMEICEGG ELFDRIVSRG HYTERAAASV AKTILEVVKV CHEHGVIHRD LKPENFLFSN
201: GTETAQLKAI DFGLSIFFKP AQRFNEIVGS PYYMAPEVLR RNYGPEIDVW SAGVILYILL CGVPPFWAET EEGIAHAIVR GNIDFERDPW PKVSHEAKEL
301: VKNMLDANPY SRLTVQEVLE HPWIRNAERA PNVNLGDNVR TKIQQFLLMN RFKKKVLRIV ADNLPNEEIA AIVQMFQTMD TDKNGHLTFE ELRDGLKKIG
401: QVVPDGDVKM LMDAADTDGN GMLSCDEFVT LSIHLKRMGC DEHLQEAFKY FDKNGNGFIE LDELKVALCD DKLGHANGND QWIKDIFFDV DLNKDGRISF
501: DEFKAMMKSG TDWKMASRQY SRALLNALSI KMFKEDFGDN GPKSHSMEFP IARKRAKLLD APKNKSMELQ ISKTYKPSGL RN

Arabidopsis Description

CPK24Calcium-dependent protein kinase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIQ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.