CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19084	Canola	plastid	96.03	98.41
CDY10809	Canola	cytosol	87.76	94.79
CDY34489	Canola	cytosol	87.41	94.24
AT2G31500.1	Thale cress	plastid	92.07	91.75
CDX84782	Canola	cytosol, plastid	86.03	90.73
CDY23939	Canola	cytosol, plastid	85.86	90.55
Solyc06g073350.2.1	Tomato	plastid	62.07	67.16
KRH24650	Soybean	mitochondrion, plastid	61.03	66.42
PGSC0003DMT400069175	Potato	plastid	61.21	66.23
VIT_05s0102g00170.t01	Wine grape	cytosol	62.24	65.16
KRH29653	Soybean	plastid	60.86	65.13
OQU80791	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	30.86	60.47
CDX73684	Canola	cytosol	53.62	58.9
CDY29049	Canola	cytosol	53.62	58.9
CDX95303	Canola	cytosol	53.45	58.71
CDX78044	Canola	cytosol, nucleus, plasma membrane	53.28	58.52
CDY23165	Canola	cytosol	53.28	58.52
CDX90631	Canola	cytosol	53.28	58.41
CDY44918	Canola	cytosol	53.62	58.24
GSMUA_Achr3P21540_001	Banana	cytosol	51.55	58.06
CDY42266	Canola	cytosol	53.28	57.87
CDX92529	Canola	cytosol	53.1	57.68
CDY14001	Canola	cytosol	52.59	57.55
CDY53966	Canola	cytosol	52.76	57.52
CDX97205	Canola	cytosol	52.59	57.01
CDY48773	Canola	cytosol	46.38	56.75
TraesCS5A01G118200.1	Wheat	mitochondrion, plastid	53.97	56.6
CDX79906	Canola	cytosol	51.72	56.39
CDX67695	Canola	cytosol	52.07	56.34
CDY33817	Canola	cytosol	52.24	56.32
Os12t0230200-02	Rice	plasma membrane	54.66	56.31
CDY06098	Canola	cytosol	52.41	56.19
HORVU5Hr1G029260.2	Barley	mitochondrion	54.14	56.17
CDY14793	Canola	cytosol	47.24	56.15
GSMUA_Achr3P19300_001	Banana	cytosol	51.38	56.12
Zm00001d041165_P004	Maize	cytosol, mitochondrion	54.66	56.11
TraesCS5B01G112900.1	Wheat	mitochondrion	53.1	56.0
CDX72022	Canola	cytosol	52.07	55.93
EES15873	Sorghum	mitochondrion	54.83	55.89
CDY06900	Canola	cytosol	51.03	55.74
CDY45391	Canola	cytosol	52.41	55.68
Zm00001d024003_P001	Maize	mitochondrion	54.31	55.65
CDX73108	Canola	cytosol	52.41	55.58
CDX81903	Canola	cytosol, plastid	51.9	55.43
CDY21691	Canola	cytosol, plastid	51.9	55.03
HORVU5Hr1G078430.2	Barley	mitochondrion	48.97	51.26
TraesCS5A01G298500.1	Wheat	mitochondrion	48.28	51.09
TraesCS5D01G305200.1	Wheat	mitochondrion	48.62	51.09
Os08t0540400-01	Rice	plasma membrane	49.66	50.97
TraesCS5B01G297700.1	Wheat	mitochondrion	48.45	50.91
CDY26714	Canola	cytosol	52.41	49.92
CDY19259	Canola	cytosol, plastid	52.41	49.59
EES04099	Sorghum	cytosol	47.41	49.37
TraesCS5D01G119100.2	Wheat	mitochondrion	50.52	49.24
TraesCS7B01G165200.1	Wheat	mitochondrion	48.79	49.05
Os09t0514200-01	Rice	mitochondrion	48.45	48.7
TraesCS7A01G267000.1	Wheat	cytosol, mitochondrion	48.62	48.37
TraesCS7D01G267700.1	Wheat	mitochondrion, plastid	48.28	47.95
Zm00001d052713_P002	Maize	plasma membrane	37.93	46.91
Zm00001d021139_P008	Maize	cytosol, mitochondrion	46.38	46.86
CDY16652	Canola	cytosol	36.55	45.01
CDY40640	Canola	cytosol	17.07	44.2
HORVU7Hr1G056060.7	Barley	cytosol	38.1	39.53
OQU89769	Sorghum	mitochondrion	21.72	38.77
CDY10803	Canola	cytosol	28.62	37.3
CDY45213	Canola	plastid	33.97	37.1
CDY69753	Canola	cytosol, plastid	33.62	36.52
CDY30782	Canola	plastid	32.76	36.33
CDY47052	Canola	cytosol	33.62	36.04
CDY57585	Canola	cytosol, mitochondrion	25.69	35.99
CDY18593	Canola	plastid	33.28	35.81
CDY63401	Canola	cytosol, plastid	35.52	35.76
CDY38141	Canola	cytosol, plastid	35.34	35.71
CDX72575	Canola	cytosol	33.28	35.67
CDX81407	Canola	plastid	33.28	35.67
CDY07808	Canola	plastid	35.17	34.93
CDY29208	Canola	plastid	34.66	34.54
CDY24762	Canola	cytosol	13.28	34.07
CDY65651	Canola	cytosol	33.97	33.68
CDY35427	Canola	cytosol	32.76	33.51
CDY22505	Canola	cytosol	32.59	33.27
CDY65016	Canola	cytosol	33.97	33.16
CDY06943	Canola	cytosol	26.55	33.05
CDY52824	Canola	cytosol	33.79	33.0
CDX79956	Canola	cytosol	32.07	32.24
CDY23873	Canola	cytosol	32.07	32.18
CDY18568	Canola	cytosol, plastid	32.59	31.82
CDX95464	Canola	cytosol, plastid	32.41	31.76
CDX76010	Canola	cytosol	31.21	31.75
CDX82311	Canola	cytosol	32.24	31.59
CDX92303	Canola	cytosol	32.24	31.38
CDX99267	Canola	cytosol	32.24	31.38
CDY47375	Canola	cytosol, nucleus, plasma membrane	31.03	31.36
CDX77233	Canola	cytosol, plastid	31.9	31.3
CDY16510	Canola	cytosol, plastid	32.07	31.21
CDY22990	Canola	cytosol	31.9	31.14
CDY27530	Canola	cytosol	31.03	30.2
CDY48019	Canola	cytosol	31.03	30.2
CDX87128	Canola	cytosol	30.0	30.0
CDY19836	Canola	cytosol	29.83	29.83
CDX88104	Canola	cytosol	29.48	29.33
CDX87112	Canola	cytosol	14.66	29.31
CDY05930	Canola	cytosol	29.83	28.93
CDY08129	Canola	cytosol	29.66	28.91
CDX94570	Canola	cytosol	36.72	28.71
CDX80445	Canola	cytosol	28.62	28.47
CDX86978	Canola	cytosol	30.17	26.96
CDY00200	Canola	cytosol	30.0	26.65
CDY71104	Canola	cytosol	5.69	23.57

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	GO:A0A078FQD9	UniProt:A0A078FQD9
EnsemblPlants:CDY15391	ProteinID:CDY15391	ProteinID:CDY15391.1	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00085697001	InterPro:IPR000719
InterPro:IPR002048	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF13499	PFAM:PF13833	ScanProsite:PS00018
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF160
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDCCD5	SEG:seg	:	:	:

Description

BnaC04g42320DBnaC04g42320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQD9]

Coordinates

chrLK032054:+:578965..582022

Molecular Weight (calculated)

66173.5 Da

IEP (calculated)

7.343

GRAVY (calculated)

-0.496

Length

580 amino acids

Sequence
(BLAST)

001: MGSCVSSPLK GSPFRKRPVR RRKSGKSKTS TNPRVDSSTN LSQRLIFQPP SRVLPEPIGD GIFVKYELGK ELGRGEFGVT HECIEITTRE RFACKRISKE
101: KLRTEIDVED VRREVEIMRS LPKHPNIVSF KEAFEDKDAV YLVMEICEGG ELFDRIVSRG HYTERAAASV AKTILEVVKV CHEHGVIHRD LKPENFLFSS
201: ETETAQLKAI DFGLSIFFKP GQRFNEIVGS PYYMAPEVLR RNYGPEVDVW SAGVILYILL CGVPPFWAET EEGIAHAIVR GNIDFERDPW PKVSTEAKEL
301: VKDMLDANPY SRLTVQEVLE HPWIQNAERA PNVNLGDNVR TKIQQFLLMN RFKKKVLRIV ADNLPNKEIE EIVQMFQTMD TDKNGRLTFE ELRDGLKKFG
401: TVCPDGDVKM LMDAADTDGN GMLSCEEFVT LAIHLKRMGC DEHLQQAFKY FDKNGNGSIE LDELKEALFD DDKLGHNGDQ WIKDIFFDVD LNKDGRISFD
501: EFKAMMKSGT DWKMASRQYS RALLNALSIK MFKEDGGNNG PKFHSMEFPV ARKKAKILDP KNKSMELVHS RTYKPSGLRN

Best Arabidopsis Sequence Match ( AT2G31500.1 )
(BLAST)

001: MGSCVSSPLK GSPFGKRPVR RRHSSNSRTS SVPRFDSSTN LSRRLIFQPP SRVLPEPIGD GIHLKYDLGK ELGRGEFGVT HECIEISTRE RFACKRISKE
101: KLRTEIDVED VRREVEIMRC LPKHPNIVSF KEAFEDKDAV YLVMEICEGG ELFDRIVSRG HYTERAAASV AKTILEVVKV CHEHGVIHRD LKPENFLFSN
201: GTETAQLKAI DFGLSIFFKP AQRFNEIVGS PYYMAPEVLR RNYGPEIDVW SAGVILYILL CGVPPFWAET EEGIAHAIVR GNIDFERDPW PKVSHEAKEL
301: VKNMLDANPY SRLTVQEVLE HPWIRNAERA PNVNLGDNVR TKIQQFLLMN RFKKKVLRIV ADNLPNEEIA AIVQMFQTMD TDKNGHLTFE ELRDGLKKIG
401: QVVPDGDVKM LMDAADTDGN GMLSCDEFVT LSIHLKRMGC DEHLQEAFKY FDKNGNGFIE LDELKVALCD DKLGHANGND QWIKDIFFDV DLNKDGRISF
501: DEFKAMMKSG TDWKMASRQY SRALLNALSI KMFKEDFGDN GPKSHSMEFP IARKRAKLLD APKNKSMELQ ISKTYKPSGL RN

Arabidopsis Description

CPK24Calcium-dependent protein kinase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIQ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.