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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX78797
CDY60785

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G41140.1 CDX78797 AT4G17750.1 18466301
AT2G41140.1 CDY60785 AT4G17750.1 18466301
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004600.1-P Field mustard cytosol 99.48 99.48
CDY23873 Canola cytosol 99.13 98.96
CDY35427 Canola cytosol 93.07 94.71
CDY22505 Canola cytosol 93.07 94.54
AT2G41140.1 Thale cress cytosol 93.76 93.92
CDY47375 Canola cytosol, nucleus, plasma membrane 87.87 88.33
CDX76010 Canola cytosol 86.48 87.54
KRG95088 Soybean cytosol 61.18 84.86
KRH33063 Soybean endoplasmic reticulum, vacuole 48.18 81.52
GSMUA_Achr6P16020_001 Banana cytosol 59.79 80.42
CDY57585 Canola cytosol, mitochondrion 57.37 79.95
KRH71707 Soybean cytosol 80.76 79.93
Solyc10g078390.1.1 Tomato cytosol 79.03 79.44
Os07t0641200-01 Rice plasma membrane 35.88 79.01
PGSC0003DMT400021598 Potato mitochondrion 78.51 78.92
HORVU7Hr1G066710.3 Barley cytosol 23.22 78.36
HORVU6Hr1G016380.1 Barley cytosol 22.88 77.19
HORVU3Hr1G026700.1 Barley plasma membrane 18.54 76.43
VIT_08s0040g01250.t01 Wine grape cytosol, plastid, vacuole 78.16 76.05
CDY06943 Canola cytosol 61.35 75.97
GSMUA_Achr10P... Banana cytosol 75.74 75.87
Os03t0366200-01 Rice cytosol, plasma membrane 37.95 75.78
EER99788 Sorghum cytosol 76.43 74.37
GSMUA_Achr6P23680_001 Banana cytosol 73.83 74.35
TraesCS2A01G146200.2 Wheat cytosol 76.08 74.28
TraesCS2B01G171600.1 Wheat cytosol 76.08 74.03
TraesCS2D01G150800.1 Wheat cytosol 76.08 74.03
GSMUA_Achr3P18430_001 Banana cytosol 68.63 73.47
HORVU5Hr1G097280.1 Barley extracellular, plasma membrane 11.96 73.4
EER94810 Sorghum cytosol 72.27 70.44
CDY69753 Canola cytosol, plastid 65.16 70.41
HORVU1Hr1G005350.3 Barley endoplasmic reticulum, plasma membrane 23.4 69.95
CDY65651 Canola cytosol 70.71 69.74
CDY52824 Canola cytosol 71.75 69.7
CDY65016 Canola cytosol 71.4 69.36
Zm00001d047428_P001 Maize cytosol 71.4 68.9
CDX95464 Canola cytosol, plastid 64.82 63.18
CDY18568 Canola cytosol, plastid 64.99 63.13
CDX92303 Canola cytosol 64.64 62.58
Zm00001d022305_P001 Maize cytosol 64.64 62.58
CDX82311 Canola cytosol 63.95 62.33
CDX99267 Canola cytosol 64.3 62.25
Zm00001d007029_P001 Maize cytosol 64.3 62.04
Zm00001d029264_P004 Maize cytosol 71.75 61.79
CDY22990 Canola cytosol 63.6 61.78
CDX77233 Canola cytosol, plastid 62.39 60.91
CDY16510 Canola cytosol, plastid 62.22 60.23
CDY27530 Canola cytosol 59.1 57.21
CDY48019 Canola cytosol 59.1 57.21
CDY19836 Canola cytosol 57.19 56.9
CDX87128 Canola cytosol 57.02 56.72
CDX88104 Canola cytosol 55.81 55.23
CDX80445 Canola cytosol 55.63 55.06
CDY08129 Canola cytosol 56.67 54.96
CDY05930 Canola cytosol 56.5 54.52
HORVU2Hr1G025890.1 Barley cytosol 71.06 51.25
CDY00200 Canola cytosol 56.67 50.08
CDX86978 Canola cytosol 56.15 49.92
CDX87112 Canola cytosol 23.05 45.86
CDY45213 Canola plastid 41.25 44.82
CDY30782 Canola plastid 40.38 44.55
CDY38141 Canola cytosol, plastid 43.5 43.73
CDY18593 Canola plastid 40.73 43.6
CDY63401 Canola cytosol, plastid 43.5 43.58
CDX72575 Canola cytosol 40.55 43.25
CDY29208 Canola plastid 43.5 43.13
CDX81407 Canola plastid 40.38 43.07
CDY47052 Canola cytosol 40.38 43.07
CDY07808 Canola plastid 43.33 42.81
CDY40640 Canola cytosol 15.08 38.84
CDX92529 Canola cytosol 34.49 37.27
CDY42266 Canola cytosol 34.49 37.27
CDY44918 Canola cytosol 34.32 37.08
CDY53966 Canola cytosol 33.8 36.65
CDX97205 Canola cytosol 33.97 36.64
CDY14001 Canola cytosol 33.62 36.6
CDY48773 Canola cytosol 29.81 36.29
CDX67695 Canola cytosol 33.28 35.82
CDY33817 Canola cytosol 33.28 35.69
CDX72022 Canola cytosol 33.1 35.37
CDY06098 Canola cytosol 33.1 35.3
CDX73684 Canola cytosol 31.89 34.85
CDX78044 Canola cytosol, nucleus, plasma membrane 31.72 34.66
CDY23165 Canola cytosol 31.72 34.66
CDX95303 Canola cytosol 31.54 34.47
CDY29049 Canola cytosol 31.54 34.47
CDY45391 Canola cytosol 32.58 34.43
CDY14793 Canola cytosol 29.12 34.43
CDX81903 Canola cytosol, plastid 32.24 34.25
CDX90631 Canola cytosol 31.37 34.22
CDX73108 Canola cytosol 32.41 34.19
CDY21691 Canola cytosol, plastid 32.41 34.19
CDY10809 Canola cytosol 31.72 34.08
CDX79906 Canola cytosol 31.37 34.02
CDY06900 Canola cytosol 31.2 33.9
CDY34489 Canola cytosol 31.54 33.83
CDY16652 Canola cytosol 27.56 33.76
CDX84782 Canola cytosol, plastid 31.89 33.45
CDY23939 Canola cytosol, plastid 31.89 33.45
CDY19084 Canola plastid 32.41 33.04
CDY71104 Canola cytosol 7.8 32.14
CDY15391 Canola plastid 32.24 32.07
CDY26714 Canola cytosol 32.24 30.54
CDY19259 Canola cytosol, plastid 32.24 30.34
CDY10803 Canola cytosol 20.8 26.97
CDX94570 Canola cytosol 27.38 21.29
CDY24762 Canola cytosol 7.63 19.47
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.5Gene3D:3.30.200.20GO:A0A078CS18EnsemblPlants:CDX79956
ProteinID:CDX79956ProteinID:CDX79956.1InterPro:EF-hand-dom_pairGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00132818001
InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR24349PANTHER:PTHR24349:SF92InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF47473
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EEF82DSEG:seg::
Description
BnaA05g02000D
Coordinates
chrLK031819:-:1031223..1034846
Molecular Weight (calculated)
64395.6 Da
IEP (calculated)
8.500
GRAVY (calculated)
-0.255
Length
577 amino acids
Sequence
(BLAST)
001: MGMCHGKPIE HQSKQSLPAP DEPQPPPPPP PAKSSGFPFY SPSPLPSLFK SSPAVSSSAS STPLRIFKRP FPPPSPAKHI RAFLARRHGS SAKPPSEVSI
101: PEGEEFEIGL DKSFGFSKHF ASHYEIDGEV GRGHFGYTCS AKGKKGSLKG QEVAVKVIPK SKMTTAIAIE DVSREVKILR ALTGHKNLVQ FYDAFEDEEN
201: VYIVMELCKG GELLDKILQR GGKYSEDDAK QVMVQILSVV AYCHLQGVVH RDLKPENFLF STKDETSPLK AIDFGLSDYV KPDERLNDIV GSAYYVAPEV
301: LHRTYGTEAD MWSIGVIAYI LLCGSRPFWA RTESGIFRAV LKAEPNFEEA PWPSLSPDAV DFVKRLLNKD YRKRLTAAQA LCHPWLVGSH ELKIPSDMII
401: YKLVKVYIMS TSLRKSALQA LAKTLTVPQL AYLREQFTLL GPSKNGYISM QNYKTAILKT ATDATKDSRV LDFVHMISCL QYKKLDFEEF CASALSVYQL
501: EAMETWEQHA RRAYELFEKD GNRPIMIEEL ASELGLGPSV PVHVVLQDWI RHSDGKLSFL GFVRLLHGVS SRTLQKA
Best Arabidopsis Sequence Match ( AT2G41140.1 )
(BLAST)
001: MGICHGKPVE QQSKSLPVSG ETNEAPTNSQ PPAKSSGFPF YSPSPVPSLF KSSPSVSSSV SSTPLRIFKR PFPPPSPAKH IRAFLARRYG SVKPNEVSIP
101: EGKECEIGLD KSFGFSKQFA SHYEIDGEVG RGHFGYTCSA KGKKGSLKGQ EVAVKVIPKS KMTTAIAIED VSREVKMLRA LTGHKNLVQF YDAFEDDENV
201: YIVMELCKGG ELLDKILQRG GKYSEDDAKK VMVQILSVVA YCHLQGVVHR DLKPENFLFS TKDETSPLKA IDFGLSDYVK PDERLNDIVG SAYYVAPEVL
301: HRTYGTEADM WSIGVIAYIL LCGSRPFWAR TESGIFRAVL KAEPNFEEAP WPSLSPEAVD FVKRLLNKDY RKRLTAAQAL CHPWLVGSHE LKIPSDMIIY
401: KLVKVYIMST SLRKSALAAL AKTLTVPQLA YLREQFTLLG PSKNGYISMQ NYKTAILKSS TDAMKDSRVF DFVHMISCLQ YKKLDFEEFC ASALSVYQLE
501: AMETWEQHAR RAYELFEKDG NRPIMIEELA SELGLGPSVP VHVVLQDWIR HSDGKLSFLG FVRLLHGVSS RTLQKA
Arabidopsis Description
CRK1CDPK-related kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80673]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.