Factsheet for GSMUA_Achr6P23680_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P27600_001
GSMUA_Achr4P04500_001
GSMUA_Achr4P17040_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41140.1	GSMUA_Achr3P27600_001	AT4G17750.1	18466301
AT2G41140.1	GSMUA_Achr4P04500_001	AT4G17750.1	18466301
AT2G41140.1	GSMUA_Achr4P17040_001	AT4G17750.1	18466301

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P16020_001	Banana	cytosol	67.54	90.21
GSMUA_Achr10P...	Banana	cytosol	89.01	88.54
GSMUA_Achr3P18430_001	Banana	cytosol	79.23	84.23
KRG95088	Soybean	cytosol	58.81	81.01
KRH33063	Soybean	endoplasmic reticulum, vacuole	47.12	79.18
Os07t0641200-01	Rice	plasma membrane	35.95	78.63
HORVU7Hr1G066710.3	Barley	cytosol	23.39	78.36
Os03t0366200-01	Rice	cytosol, plasma membrane	39.09	77.51
HORVU6Hr1G016380.1	Barley	cytosol	23.04	77.19
Solyc10g078390.1.1	Tomato	cytosol	77.31	77.18
HORVU3Hr1G026700.1	Barley	plasma membrane	18.85	77.14
PGSC0003DMT400021598	Potato	mitochondrion	76.79	76.66
TraesCS2A01G146200.2	Wheat	cytosol	78.88	76.48
TraesCS2D01G150800.1	Wheat	cytosol	78.88	76.22
EER99788	Sorghum	cytosol	78.88	76.22
TraesCS2B01G171600.1	Wheat	cytosol	78.88	76.22
KRH71707	Soybean	cytosol	76.44	75.13
CDY35427	Canola	cytosol	73.82	74.6
Bra000215.1-P	Field mustard	cytosol	73.82	74.6
CDY22505	Canola	cytosol	73.65	74.3
AT3G56760.1	Thale cress	cytosol	74.52	74.0
CDX79956	Canola	cytosol	74.35	73.83
Bra004600.1-P	Field mustard	cytosol	74.35	73.83
AT2G41140.1	Thale cress	cytosol	74.0	73.61
CDY23873	Canola	cytosol	74.0	73.36
VIT_08s0040g01250.t01	Wine grape	cytosol, plastid, vacuole	75.92	73.36
EER94810	Sorghum	cytosol	75.22	72.8
CDY47375	Canola	cytosol, nucleus, plasma membrane	72.43	72.3
CDX76010	Canola	cytosol	71.03	71.4
HORVU5Hr1G097280.1	Barley	extracellular, plasma membrane	11.69	71.28
Bra014673.1-P	Field mustard	cytosol, nucleus, plasma membrane	71.38	71.13
Zm00001d047428_P001	Maize	cytosol	74.0	70.9
HORVU1Hr1G005350.3	Barley	endoplasmic reticulum, plasma membrane	23.04	68.39
GSMUA_Achr1P21380_001	Banana	cytosol	71.73	67.71
CDY57585	Canola	cytosol, mitochondrion	48.87	67.63
Bra016950.1-P	Field mustard	cytosol	57.59	67.07
GSMUA_Achr2P07660_001	Banana	cytosol	71.03	67.05
Zm00001d022305_P001	Maize	cytosol	68.06	65.44
Zm00001d007029_P001	Maize	cytosol	67.71	64.88
Zm00001d029264_P004	Maize	cytosol	74.17	63.43
CDY06943	Canola	cytosol	51.48	63.3
GSMUA_Achr9P20900_001	Banana	cytosol	55.5	58.56
GSMUA_Achr7P05810_001	Banana	cytosol	55.32	57.95
GSMUA_Achr3P12500_001	Banana	cytosol	54.28	57.59
GSMUA_AchrUn_...	Banana	cytosol	53.58	57.28
GSMUA_Achr2P03380_001	Banana	cytosol	53.75	57.25
GSMUA_Achr1P04170_001	Banana	cytosol	54.28	57.17
GSMUA_Achr2P00480_001	Banana	cytosol	27.05	52.54
HORVU2Hr1G025890.1	Barley	cytosol	72.95	52.25
GSMUA_Achr1P08900_001	Banana	plastid	41.71	44.59
GSMUA_Achr8P19290_001	Banana	cytosol	40.66	44.05
GSMUA_Achr5P18720_001	Banana	plastid	38.74	39.15
GSMUA_Achr3P29750_001	Banana	cytosol	32.98	37.5
GSMUA_Achr2P17730_001	Banana	cytosol	26.35	37.47
GSMUA_Achr4P13880_001	Banana	cytosol	33.86	36.74
GSMUA_Achr4P06930_001	Banana	cytosol	30.72	36.21
GSMUA_AchrUn_...	Banana	cytosol	32.64	36.17
GSMUA_Achr8P31440_001	Banana	cytosol	32.11	36.15
GSMUA_Achr2P07790_001	Banana	cytosol	32.11	36.08
GSMUA_Achr5P29340_001	Banana	cytosol	32.98	35.8
GSMUA_Achr8P02740_001	Banana	cytosol	32.29	35.71
GSMUA_AchrUn_...	Banana	cytosol	30.89	35.47
GSMUA_Achr4P18940_001	Banana	cytosol	31.94	34.33
GSMUA_Achr3P21540_001	Banana	cytosol	30.54	33.98
GSMUA_Achr3P19300_001	Banana	cytosol	29.32	31.64

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.5	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G23680_001	EnsemblPlants:GSMUA_Achr6P23680_001	EnsemblPlants:GSMUA_Achr6T23680_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0T9L6	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349
PANTHER:PTHR24349:SF92	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294BF80	SEG:seg	:	:	:

Description

Calcium/calmodulin-dependent serine/threonine-protein kinase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G23680_001]

Coordinates

chr6:-:23972318..23979327

Molecular Weight (calculated)

64548.6 Da

IEP (calculated)

7.417

GRAVY (calculated)

-0.260

Length

573 amino acids

Sequence
(BLAST)

001: MGLCHGKQIQ SPEIQEEIPS IEEPSEVPGI PRQPKFPFYS PSPLRGSYKD SSANTSLNST PLRFLKRPFP PPSPAKHIKA LLARRHGSVK PNEASIPEGS
101: EVELGLNKNF GFSKQFFSKF ELGEEVGRGH FGYTCTAKEK KGDMKGEEVA IKVVPKAKMT TAISIEDVRR EVRILNSLTG HRNLVQFYDA YEDEDNVYIV
201: MELCKGGELL ERILSRGGKY SEEDAKAVIF QILSVISFCH LQGVVHRDLK PENFLFLTKD EKSTLKAIDF GLSDFAKPDE RLNDIVGSAY YVAPEVLHRS
301: YGTEADMWSI GVIAYILLCG SRPFWARTES GIFRAVLKEE PSFDEAPWPS LSSQAKDFVK ILLNKDFRKR MTAAQALCHP WLWNPEELKI PLDIVVYKLV
401: KAYICSSSLR KSALRALAKT LTVDQLYFLQ EQFSLLGPNK SGYISLQNFK MALLRNSTDA MKDSGILDFV NMVSSLQYRK LDFEEFAAAA ISVHQMEALD
501: AWEQHARHGY EFFEKDGNRP IMIEELASDL GLSPSVPVHV VLQDWIRHSD GKLSLLGFVK LLHGFSSRTI PKA

Best Arabidopsis Sequence Match ( AT2G41140.1 )
(BLAST)

001: MGICHGKPVE QQSKSLPVSG ETNEAPTNSQ PPAKSSGFPF YSPSPVPSLF KSSPSVSSSV SSTPLRIFKR PFPPPSPAKH IRAFLARRYG SVKPNEVSIP
101: EGKECEIGLD KSFGFSKQFA SHYEIDGEVG RGHFGYTCSA KGKKGSLKGQ EVAVKVIPKS KMTTAIAIED VSREVKMLRA LTGHKNLVQF YDAFEDDENV
201: YIVMELCKGG ELLDKILQRG GKYSEDDAKK VMVQILSVVA YCHLQGVVHR DLKPENFLFS TKDETSPLKA IDFGLSDYVK PDERLNDIVG SAYYVAPEVL
301: HRTYGTEADM WSIGVIAYIL LCGSRPFWAR TESGIFRAVL KAEPNFEEAP WPSLSPEAVD FVKRLLNKDY RKRLTAAQAL CHPWLVGSHE LKIPSDMIIY
401: KLVKVYIMST SLRKSALAAL AKTLTVPQLA YLREQFTLLG PSKNGYISMQ NYKTAILKSS TDAMKDSRVF DFVHMISCLQ YKKLDFEEFC ASALSVYQLE
501: AMETWEQHAR RAYELFEKDG NRPIMIEELA SELGLGPSVP VHVVLQDWIR HSDGKLSFLG FVRLLHGVSS RTLQKA

Arabidopsis Description

CRK1CDPK-related kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80673]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.