Factsheet for Bra016950.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra040179.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41140.1	Bra040179.1-P	AT4G17750.1	18466301

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06943	Canola	cytosol	87.4	92.27
KRG95088	Soybean	cytosol	61.59	72.84
Bra000215.1-P	Field mustard	cytosol	81.3	70.55
KRH33063	Soybean	endoplasmic reticulum, vacuole	48.58	70.09
Os07t0641200-01	Rice	plasma membrane	36.99	69.47
AT2G41140.1	Thale cress	cytosol	81.3	69.44
GSMUA_Achr6P16020_001	Banana	cytosol	60.37	69.23
Bra004600.1-P	Field mustard	cytosol	80.49	68.63
Os03t0366200-01	Rice	cytosol, plasma membrane	38.82	66.09
HORVU7Hr1G066710.3	Barley	cytosol	22.76	65.5
Bra014673.1-P	Field mustard	cytosol, nucleus, plasma membrane	75.81	64.87
HORVU6Hr1G016380.1	Barley	cytosol	22.36	64.33
HORVU5Hr1G097280.1	Barley	extracellular, plasma membrane	11.99	62.77
HORVU3Hr1G026700.1	Barley	plasma membrane	17.68	62.14
KRH71707	Soybean	cytosol	72.56	61.23
Solyc10g078390.1.1	Tomato	cytosol	70.73	60.63
GSMUA_Achr3P18430_001	Banana	cytosol	66.06	60.3
PGSC0003DMT400021598	Potato	mitochondrion	69.92	59.93
VIT_08s0040g01250.t01	Wine grape	cytosol, plastid, vacuole	70.73	58.68
GSMUA_Achr10P...	Banana	cytosol	67.89	57.99
GSMUA_Achr6P23680_001	Banana	cytosol	67.07	57.59
HORVU1Hr1G005350.3	Barley	endoplasmic reticulum, plasma membrane	22.56	57.51
TraesCS2A01G146200.2	Wheat	cytosol	68.29	56.85
TraesCS2B01G171600.1	Wheat	cytosol	68.29	56.66
TraesCS2D01G150800.1	Wheat	cytosol	68.29	56.66
EER99788	Sorghum	cytosol	68.29	56.66
EER94810	Sorghum	cytosol	65.04	54.05
Zm00001d047428_P001	Maize	cytosol	64.84	53.34
Bra036089.1-P	Field mustard	cytosol	63.62	52.69
Bra037539.1-P	Field mustard	cytosol, plastid	60.16	49.83
Bra022388.1-P	Field mustard	cytosol	59.55	49.16
Zm00001d029264_P004	Maize	cytosol	64.84	47.61
Zm00001d007029_P001	Maize	cytosol	56.3	46.32
Zm00001d022305_P001	Maize	cytosol	55.89	46.14
Bra014201.1-P	Field mustard	cytosol, plastid	56.91	45.68
Bra039263.1-P	Field mustard	cytosol	53.86	44.46
Bra036512.1-P	Field mustard	cytosol	51.63	43.79
Bra017989.1-P	Field mustard	cytosol	52.24	43.49
Bra001734.1-P	Field mustard	cytosol, plastid	56.71	42.73
Bra009765.1-P	Field mustard	cytosol	49.39	42.71
HORVU2Hr1G025890.1	Barley	cytosol	66.87	41.12
Bra019593.1-P	Field mustard	cytosol	52.03	39.32
Bra012058.1-P	Field mustard	plastid	41.87	38.79
Bra037181.1-P	Field mustard	plastid	41.06	37.55
Bra024487.1-P	Field mustard	plastid	43.29	36.66
Bra017746.1-P	Field mustard	cytosol	40.24	36.6
Bra002237.1-P	Field mustard	cytosol	34.35	35.36
Bra020040.1-P	Field mustard	cytosol	35.57	32.77
Bra008879.1-P	Field mustard	cytosol	35.16	32.52
Bra026489.1-P	Field mustard	cytosol	32.11	32.51
Bra002324.1-P	Field mustard	cytosol	32.32	32.19
Bra003287.1-P	Field mustard	cytosol	34.96	31.97
Bra015896.1-P	Field mustard	cytosol	34.96	31.5
Bra031055.1-P	Field mustard	cytosol, plastid	33.94	31.45
Bra006881.1-P	Field mustard	cytosol	33.74	31.44
Bra007334.1-P	Field mustard	cytosol	34.55	31.42
Bra033476.1-P	Field mustard	cytosol	33.54	31.25
Bra012835.1-P	Field mustard	cytosol	33.54	31.25
Bra016909.1-P	Field mustard	cytosol	33.54	31.07
Bra004656.1-P	Field mustard	cytosol	33.54	31.02
Bra011605.1-P	Field mustard	cytosol	33.94	30.64
Bra025696.1-P	Field mustard	cytosol, plastid	32.52	30.3
Bra022844.1-P	Field mustard	cytosol, plastid	32.72	29.27
Bra018236.1-P	Field mustard	plastid	33.54	28.25
Bra021727.1-P	Field mustard	plasma membrane	33.33	27.84
Bra018243.1-P	Field mustard	cytosol	22.97	26.34
Bra002099.1-P	Field mustard	plastid	42.89	23.6

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.5	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra016950	EnsemblPlants:Bra016950.1
EnsemblPlants:Bra016950.1-P	InterPro:EF-hand-dom_pair	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M4DKC1	PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF92	InterPro:Prot_kinase_dom
SUPFAM:SSF47473	SUPFAM:SSF56112	UniParc:UPI00025452F1	SEG:seg	:	:

Description

AT2G41140 (E=6e-215) CRK1, ATCRK1, ATCBK3 | CRK1 (CDPK-RELATED KINASE 1); calcium ion binding / calcium-dependent protein serine/threonine phosphatase/ calmodulin-dependent protein kinase/ kinase

Coordinates

chrA04:+:17426262..17431744

Molecular Weight (calculated)

55458.9 Da

IEP (calculated)

7.266

GRAVY (calculated)

-0.224

Length

492 amino acids

Sequence
(BLAST)

001: MGICNGKPIE QRSRQSRRQV SAETDEANEV GLNKSFGFSR HFSTHYKIDG QVGRGDLGYT CSAKGKKGSL KGQEVAVKVI HKAKLTNALM VEDVSREVKI
101: MRALTGHKNL VQFYDAFEDD ENVYIVMELC KGGNLFEKII ERGCKYAEDD AKHVMVQILS VVAYCHLQGV VHRDLKPEHF LFSTKDETSP LKAVGVGFSA
201: YVKPDERLSD IVGSSLHVAP EVLHRAYGTE SDMWMVGVMT YVLLSGSRPF WAPTEYELFR AVLKTEPSFE EAPWPSLSPD VVDFVKRLLH KDYRKRLTAA
301: QALCHPWLVG SHEMKIPCDM IIYKLVKVYI MSTSLRKSAL AALAKTLTIQ QLAYLREQFT LLEPSKDGYI SMQNFKTAIL KSSTNAMKDS GVLDYVHMLD
401: FEEFCASALS VYQMEAMETW EEHSGRAYEL FEKDGNRPIM IEELASELRL GPSSVPMHAV LQDWIRQSDG KLSFLGFVRL LHGASSQTLQ KA

Best Arabidopsis Sequence Match ( AT2G41140.1 )
(BLAST)

001: MGICHGKPVE QQSKSLPVSG ETNEAPTNSQ PPAKSSGFPF YSPSPVPSLF KSSPSVSSSV SSTPLRIFKR PFPPPSPAKH IRAFLARRYG SVKPNEVSIP
101: EGKECEIGLD KSFGFSKQFA SHYEIDGEVG RGHFGYTCSA KGKKGSLKGQ EVAVKVIPKS KMTTAIAIED VSREVKMLRA LTGHKNLVQF YDAFEDDENV
201: YIVMELCKGG ELLDKILQRG GKYSEDDAKK VMVQILSVVA YCHLQGVVHR DLKPENFLFS TKDETSPLKA IDFGLSDYVK PDERLNDIVG SAYYVAPEVL
301: HRTYGTEADM WSIGVIAYIL LCGSRPFWAR TESGIFRAVL KAEPNFEEAP WPSLSPEAVD FVKRLLNKDY RKRLTAAQAL CHPWLVGSHE LKIPSDMIIY
401: KLVKVYIMST SLRKSALAAL AKTLTVPQLA YLREQFTLLG PSKNGYISMQ NYKTAILKSS TDAMKDSRVF DFVHMISCLQ YKKLDFEEFC ASALSVYQLE
501: AMETWEQHAR RAYELFEKDG NRPIMIEELA SELGLGPSVP VHVVLQDWIR HSDGKLSFLG FVRLLHGVSS RTLQKA

Arabidopsis Description

CRK1CDPK-related kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80673]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.