Factsheet for GSMUA_Achr10P12640_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P27600_001
GSMUA_Achr4P04500_001
GSMUA_Achr4P17040_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41140.1	GSMUA_Achr3P27600_001	AT4G17750.1	18466301
AT2G41140.1	GSMUA_Achr4P04500_001	AT4G17750.1	18466301
AT2G41140.1	GSMUA_Achr4P17040_001	AT4G17750.1	18466301

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P16020_001	Banana	cytosol	69.44	93.24
GSMUA_Achr6P23680_001	Banana	cytosol	88.54	89.01
GSMUA_Achr3P18430_001	Banana	cytosol	79.86	85.34
KRG95088	Soybean	cytosol	59.55	82.45
Os07t0641200-01	Rice	plasma membrane	37.5	82.44
Os03t0366200-01	Rice	cytosol, plasma membrane	40.97	81.66
HORVU7Hr1G066710.3	Barley	cytosol	23.96	80.7
KRH33063	Soybean	endoplasmic reticulum, vacuole	47.74	80.65
HORVU6Hr1G016380.1	Barley	cytosol	23.78	80.12
TraesCS2A01G146200.2	Wheat	cytosol	81.25	79.19
EER99788	Sorghum	cytosol	81.25	78.92
TraesCS2B01G171600.1	Wheat	cytosol	81.08	78.75
TraesCS2D01G150800.1	Wheat	cytosol	81.08	78.75
Solyc10g078390.1.1	Tomato	cytosol	78.47	78.75
PGSC0003DMT400021598	Potato	mitochondrion	78.3	78.57
KRH71707	Soybean	cytosol	79.17	78.22
HORVU3Hr1G026700.1	Barley	plasma membrane	18.92	77.86
VIT_08s0040g01250.t01	Wine grape	cytosol, plastid, vacuole	78.65	76.39
CDY35427	Canola	cytosol	75.17	76.37
Bra000215.1-P	Field mustard	cytosol	75.17	76.37
CDY22505	Canola	cytosol	74.83	75.88
AT3G56760.1	Thale cress	cytosol	75.87	75.74
Bra004600.1-P	Field mustard	cytosol	75.87	75.74
CDX79956	Canola	cytosol	75.87	75.74
AT2G41140.1	Thale cress	cytosol	75.69	75.69
CDY23873	Canola	cytosol	75.87	75.61
HORVU5Hr1G097280.1	Barley	extracellular, plasma membrane	12.33	75.53
EER94810	Sorghum	cytosol	77.08	75.0
CDY47375	Canola	cytosol, nucleus, plasma membrane	73.96	74.22
CDX76010	Canola	cytosol	72.57	73.33
Zm00001d047428_P001	Maize	cytosol	76.04	73.24
Bra014673.1-P	Field mustard	cytosol, nucleus, plasma membrane	72.92	73.04
HORVU1Hr1G005350.3	Barley	endoplasmic reticulum, plasma membrane	23.78	70.98
GSMUA_Achr1P21380_001	Banana	cytosol	72.92	69.19
CDY57585	Canola	cytosol, mitochondrion	49.31	68.6
GSMUA_Achr2P07660_001	Banana	cytosol	71.7	68.04
Bra016950.1-P	Field mustard	cytosol	57.99	67.89
Zm00001d022305_P001	Maize	cytosol	69.97	67.62
Zm00001d007029_P001	Maize	cytosol	69.44	66.89
Zm00001d029264_P004	Maize	cytosol	75.35	64.78
CDY06943	Canola	cytosol	51.74	63.95
GSMUA_Achr9P20900_001	Banana	cytosol	56.6	60.04
GSMUA_Achr7P05810_001	Banana	cytosol	55.56	58.5
GSMUA_AchrUn_...	Banana	cytosol	54.17	58.21
GSMUA_Achr2P03380_001	Banana	cytosol	54.34	58.18
GSMUA_Achr3P12500_001	Banana	cytosol	54.17	57.78
GSMUA_Achr1P04170_001	Banana	cytosol	54.34	57.54
HORVU2Hr1G025890.1	Barley	cytosol	74.48	53.62
GSMUA_Achr2P00480_001	Banana	cytosol	27.26	53.22
GSMUA_Achr8P19290_001	Banana	cytosol	41.67	45.37
GSMUA_Achr1P08900_001	Banana	plastid	41.84	44.96
GSMUA_Achr5P18720_001	Banana	plastid	39.93	40.56
GSMUA_Achr2P17730_001	Banana	cytosol	26.74	38.21
GSMUA_Achr3P29750_001	Banana	cytosol	33.16	37.9
GSMUA_Achr4P13880_001	Banana	cytosol	34.2	37.31
GSMUA_Achr4P06930_001	Banana	cytosol	31.08	36.83
GSMUA_AchrUn_...	Banana	cytosol	32.64	36.36
GSMUA_Achr2P07790_001	Banana	cytosol	31.94	36.08
GSMUA_Achr5P29340_001	Banana	cytosol	32.99	35.98
GSMUA_Achr8P31440_001	Banana	cytosol	31.6	35.76
GSMUA_Achr8P02740_001	Banana	cytosol	32.12	35.71
GSMUA_AchrUn_...	Banana	cytosol	30.56	35.27
GSMUA_Achr3P21540_001	Banana	cytosol	30.38	33.98
GSMUA_Achr4P18940_001	Banana	cytosol	31.25	33.77
GSMUA_Achr3P19300_001	Banana	cytosol	29.69	32.2

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.5	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G12640_001	EnsemblPlants:GSMUA_Achr10P12640_001	EnsemblPlants:GSMUA_Achr10T12640_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0RHP0	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349
PANTHER:PTHR24349:SF92	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002952044	SEG:seg	:	:	:

Description

Calcium/calmodulin-dependent serine/threonine-protein kinase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G12640_001]

Coordinates

chr10:+:21617224..21623087

Molecular Weight (calculated)

64467.7 Da

IEP (calculated)

8.442

GRAVY (calculated)

-0.275

Length

576 amino acids

Sequence
(BLAST)

001: MGVCHGKPIQ SPELQEESSP VRDISEPTPV PSTPQQPKFP FCSPSPLPGS YKNSPANSSV NSTPLRFLKR PFPPPSPAKH IKALLARRHG SVKPNEASIP
101: EGSEVEVGLD KNFGFSKQLF SKFELGEEVG RGHFGYTCTA KVKKGDMKGQ EVAVKVIPKA KMTTAIAIED VRREVRILSS LTGHKNLVQF FDAYEDEDNV
201: YIMMELCKGG ELLERILSRG GKYSEEDAKT VIVQILSVVS FCHLQGVVHR DLKPENFLFT SEDEKCTLKA IDFGLSDFVK PDERLNDIVG SAYYVAPEVL
301: HRSYGTEADM WSIGVIAYIL LCGSRPFWAR TESGIFRAVL KAEPSFDESP WPSLSSQAKD FVKKLLNKDY RKRMTAAQAL CHPWLRNPEE VKIPLDIIVY
401: KLVKAYICSS SLRKSALRAL AKTLTVNQLY YLREQFSLLG PNKSGLISLQ NLKTALLKNS TDTMKDSKVL EFVNMVSSLQ YRKLDFEEFA AAAISVHQME
501: ALDTWEQHAR QGYEFFEKDG NRPIMIEELA SELGLSPSVP VHVVLQDWIR HSDGKLSLLG FVKLLHGVSS RTIPKP

Best Arabidopsis Sequence Match ( AT2G41140.1 )
(BLAST)

001: MGICHGKPVE QQSKSLPVSG ETNEAPTNSQ PPAKSSGFPF YSPSPVPSLF KSSPSVSSSV SSTPLRIFKR PFPPPSPAKH IRAFLARRYG SVKPNEVSIP
101: EGKECEIGLD KSFGFSKQFA SHYEIDGEVG RGHFGYTCSA KGKKGSLKGQ EVAVKVIPKS KMTTAIAIED VSREVKMLRA LTGHKNLVQF YDAFEDDENV
201: YIVMELCKGG ELLDKILQRG GKYSEDDAKK VMVQILSVVA YCHLQGVVHR DLKPENFLFS TKDETSPLKA IDFGLSDYVK PDERLNDIVG SAYYVAPEVL
301: HRTYGTEADM WSIGVIAYIL LCGSRPFWAR TESGIFRAVL KAEPNFEEAP WPSLSPEAVD FVKRLLNKDY RKRLTAAQAL CHPWLVGSHE LKIPSDMIIY
401: KLVKVYIMST SLRKSALAAL AKTLTVPQLA YLREQFTLLG PSKNGYISMQ NYKTAILKSS TDAMKDSRVF DFVHMISCLQ YKKLDFEEFC ASALSVYQLE
501: AMETWEQHAR RAYELFEKDG NRPIMIEELA SELGLGPSVP VHVVLQDWIR HSDGKLSFLG FVRLLHGVSS RTLQKA

Arabidopsis Description

CRK1CDPK-related kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80673]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.