Factsheet for GSMUA_Achr2P17730_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P04700_001
GSMUA_Achr1P14070_001
GSMUA_Achr1P27230_001
GSMUA_Achr2P01120_001
GSMUA_Achr2P12680_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr3P25390_001
GSMUA_Achr4P22570_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P09010_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr6P24410_001
GSMUA_Achr7P01390_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G74740.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G74740.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G74740.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G74740.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G74740.1	GSMUA_Achr11P...	AT2G41090.1	17360592
AT1G74740.1	GSMUA_Achr2P01120_001	AT2G41090.1	17360592
AT1G74740.1	GSMUA_Achr3P09330_001	AT2G41090.1	17360592
AT1G74740.1	GSMUA_Achr3P25040_001	AT2G41090.1	17360592
AT1G74740.1	GSMUA_Achr5P07820_001	AT2G41090.1	17360592
AT1G74740.1	GSMUA_Achr5P27590_001	AT2G41090.1	17360592
AT1G74740.1	GSMUA_Achr6P15990_001	AT2G41090.1	17360592
AT1G74740.1	GSMUA_Achr6P23670_001	AT2G41090.1	17360592
AT1G74740.1	GSMUA_Achr8P05790_001	AT2G41090.1	17360592
AT1G74740.1	GSMUA_Achr9P17280_001	AT2G41090.1	17360592
AT1G74740.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT1G74740.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT1G74740.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT1G74740.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT1G74740.1	GSMUA_Achr11P...	AT2G41100.1	17360592
AT1G74740.1	GSMUA_Achr2P01120_001	AT2G41100.1	17360592
AT1G74740.1	GSMUA_Achr3P09330_001	AT2G41100.1	17360592
AT1G74740.1	GSMUA_Achr3P25040_001	AT2G41100.1	17360592
AT1G74740.1	GSMUA_Achr5P07820_001	AT2G41100.1	17360592
AT1G74740.1	GSMUA_Achr5P27590_001	AT2G41100.1	17360592
AT1G74740.1	GSMUA_Achr6P15990_001	AT2G41100.1	17360592
AT1G74740.1	GSMUA_Achr6P23670_001	AT2G41100.1	17360592
AT1G74740.1	GSMUA_Achr8P05790_001	AT2G41100.1	17360592
AT1G74740.1	GSMUA_Achr9P17280_001	AT2G41100.1	17360592
AT1G74740.1	GSMUA_Achr1P04700_001	AT4G14640.1	17360592
AT1G74740.1	GSMUA_Achr1P14070_001	AT4G14640.1	17360592
AT1G74740.1	GSMUA_Achr1P27230_001	AT4G14640.1	17360592
AT1G74740.1	GSMUA_Achr2P12680_001	AT4G14640.1	17360592
AT1G74740.1	GSMUA_Achr3P25390_001	AT4G14640.1	17360592
AT1G74740.1	GSMUA_Achr4P22570_001	AT4G14640.1	17360592
AT1G74740.1	GSMUA_Achr5P09010_001	AT4G14640.1	17360592
AT1G74740.1	GSMUA_Achr6P24410_001	AT4G14640.1	17360592
AT1G74740.1	GSMUA_Achr7P01390_001	AT4G14640.1	17360592
AT1G74740.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G74740.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G74740.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G74740.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G74740.1	GSMUA_Achr11P...	AT5G21274.1	17360592
AT1G74740.1	GSMUA_Achr2P01120_001	AT5G21274.1	17360592
AT1G74740.1	GSMUA_Achr3P09330_001	AT5G21274.1	17360592
AT1G74740.1	GSMUA_Achr3P25040_001	AT5G21274.1	17360592
AT1G74740.1	GSMUA_Achr5P07820_001	AT5G21274.1	17360592
AT1G74740.1	GSMUA_Achr5P27590_001	AT5G21274.1	17360592
AT1G74740.1	GSMUA_Achr6P15990_001	AT5G21274.1	17360592
AT1G74740.1	GSMUA_Achr6P23670_001	AT5G21274.1	17360592
AT1G74740.1	GSMUA_Achr8P05790_001	AT5G21274.1	17360592
AT1G74740.1	GSMUA_Achr9P17280_001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g05520.t01	Wine grape	cytosol	83.13	77.73
PGSC0003DMT400034291	Potato	cytosol	83.13	62.27
Solyc03g113390.2.1	Tomato	cytosol	83.13	62.27
KRH03406	Soybean	cytosol	82.38	61.37
KRH54494	Soybean	cytosol	83.62	61.16
KRH56973	Soybean	cytosol	81.39	60.85
KRH63420	Soybean	cytosol	83.37	60.43
AT1G18890.1	Thale cress	cytosol, plastid	79.65	58.9
AT1G74740.1	Thale cress	cytosol	78.91	58.78
CDX81903	Canola	cytosol, plastid	78.91	58.56
GSMUA_Achr8P02740_001	Banana	cytosol	75.19	58.49
CDY45391	Canola	cytosol	79.16	58.42
GSMUA_AchrUn_...	Banana	cytosol	74.94	58.41
CDX73108	Canola	cytosol	79.16	58.32
Bra015896.1-P	Field mustard	cytosol	78.91	58.24
CDY21691	Canola	cytosol, plastid	78.91	58.14
Bra031055.1-P	Field mustard	cytosol, plastid	76.18	57.82
GSMUA_Achr5P29340_001	Banana	cytosol	75.43	57.58
GSMUA_Achr4P06930_001	Banana	cytosol	69.23	57.41
Bra025696.1-P	Field mustard	cytosol, plastid	73.7	56.25
GSMUA_Achr8P31440_001	Banana	cytosol	70.97	56.19
Os03t0688300-01	Rice	plasma membrane	79.9	56.1
GSMUA_Achr3P29750_001	Banana	cytosol	69.48	55.56
GSMUA_AchrUn_...	Banana	cytosol	68.73	55.51
TraesCS4D01G027600.1	Wheat	plastid	77.67	54.91
GSMUA_Achr2P07790_001	Banana	cytosol	69.48	54.9
TraesCS4A01G283400.1	Wheat	plastid	77.42	54.83
Zm00001d013527_P002	Maize	cytosol, plastid	79.4	54.7
EER93646	Sorghum	plastid	78.41	53.92
GSMUA_Achr4P13880_001	Banana	cytosol	68.98	52.65
CDY26714	Canola	cytosol	79.16	52.38
TraesCS4B01G030100.1	Wheat	plastid	77.67	52.17
CDY19259	Canola	cytosol, plastid	79.16	52.04
HORVU4Hr1G004540.20	Barley	plastid	77.67	51.99
GSMUA_Achr4P18940_001	Banana	cytosol	68.73	51.97
GSMUA_Achr3P21540_001	Banana	cytosol	63.28	49.51
GSMUA_Achr3P19300_001	Banana	cytosol	62.78	47.65
GSMUA_Achr2P00480_001	Banana	cytosol	29.78	40.68
GSMUA_Achr6P16020_001	Banana	cytosol	38.46	36.13
GSMUA_Achr8P19290_001	Banana	cytosol	41.44	31.57
GSMUA_Achr1P08900_001	Banana	plastid	40.69	30.6
GSMUA_Achr5P18720_001	Banana	plastid	41.69	29.63
GSMUA_Achr3P18430_001	Banana	cytosol	37.72	28.2
GSMUA_Achr9P20900_001	Banana	cytosol	36.23	26.89
GSMUA_Achr7P05810_001	Banana	cytosol	36.48	26.87
GSMUA_Achr10P...	Banana	cytosol	38.21	26.74
GSMUA_Achr1P04170_001	Banana	cytosol	35.98	26.65
GSMUA_Achr3P12500_001	Banana	cytosol	35.48	26.48
GSMUA_Achr6P23680_001	Banana	cytosol	37.47	26.35
GSMUA_Achr1P21380_001	Banana	cytosol	39.45	26.19
GSMUA_AchrUn_...	Banana	cytosol	34.74	26.12
GSMUA_Achr2P07660_001	Banana	cytosol	38.96	25.86
GSMUA_Achr2P03380_001	Banana	cytosol	34.24	25.65

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0006970	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009987	GO:GO:0010152	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:1902584	EnsemblPlantsGene:GSMUA_Achr2G17730_001	EnsemblPlants:GSMUA_Achr2P17730_001	EnsemblPlants:GSMUA_Achr2T17730_001
InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	UniProt:M0S8W4	PFAM:PF00069	PFAM:PF13499
ScanProsite:PS00018	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF167
InterPro:Prot_kinase_dom	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000296BA06	SEG:seg	:	:	:	:

Description

Calcium-dependent protein kinase 30 [Source:GMGC_GENE;Acc:GSMUA_Achr2G17730_001]

Coordinates

chr2:+:18156982..18164215

Molecular Weight (calculated)

45685.8 Da

IEP (calculated)

5.270

GRAVY (calculated)

-0.345

Length

403 amino acids

Sequence
(BLAST)

001: MELCEGGELF DRIVAKGHYS ERAAAAVART VAEVVRMCHA NGVMHRDLKP ENFLYANKKE NSPLKAIDFG LSVFFRPGER FSEIVGSPYY MAPEVLRRNY
101: GPEIDIWSAG VILYILLCGV PPFWAETEQG VARAILRGAI DFQREPWPQV SESAKSLVKQ MLDPDPKRRL TAQQVLEHPW LQNAKKASNV PLGDIVRARL
201: KQFSVMNRFK KKAMRVIAEH LSVEEVEVIR DMFKLMDTDN NGKVSFEELK TGLQKVGSQL AESEMKLLME AADVDGNGAL DYGEFVAVII HLQRLSNDEH
301: LRRAFMFFDK DGSDFIELDE LSEALADESG QTDINVLHDI LREVDTDQDG RISYEEFVAM MKAGTDWRKA SRQYSRERFK SLSMNLMKDG SLSMGKEATD
401: LYA

Best Arabidopsis Sequence Match ( AT1G18890.1 )
(BLAST)

001: MGNCNACVRP DSKESKPSSK PKKPNRDRKL NPFAGDFTRS PAPIRVLKDV IPMSNQTQIS DKYILGRELG RGEFGITYLC TDRETHEALA CKSISKRKLR
101: TAVDIEDVRR EVAIMSTLPE HPNVVKLKAS YEDNENVHLV MELCEGGELF DRIVARGHYT ERAAAAVART IAEVVMMCHS NGVMHRDLKP ENFLFANKKE
201: NSPLKAIDFG LSVFFKPGDK FTEIVGSPYY MAPEVLKRDY GPGVDVWSAG VIIYILLCGV PPFWAETEQG VALAILRGVL DFKRDPWPQI SESAKSLVKQ
301: MLDPDPTKRL TAQQVLAHPW IQNAKKAPNV PLGDIVRSRL KQFSMMNRFK KKVLRVIAEH LSIQEVEVIK NMFSLMDDDK DGKITYPELK AGLQKVGSQL
401: GEPEIKMLME VADVDGNGFL DYGEFVAVII HLQKIENDEL FKLAFMFFDK DGSTYIELDE LREALADELG EPDASVLSDI MREVDTDKDG RINYDEFVTM
501: MKAGTDWRKA SRQYSRERFK SLSINLMKDG SLHLHDALTG QTVPV

Arabidopsis Description

CPK10Calcium-dependent protein kinase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.