Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 80.85 | 80.42 |
| GSMUA_Achr3P09330_001 | Banana | cytosol | 62.23 | 78.52 |
| GSMUA_Achr6P23670_001 | Banana | cytosol | 62.23 | 78.52 |
| GSMUA_Achr9P17280_001 | Banana | cytosol | 62.23 | 78.52 |
| Solyc10g081170.1.1 | Tomato | extracellular | 62.23 | 78.52 |
| Solyc10g077010.1.1 | Tomato | cytosol | 62.23 | 78.52 |
| CDX96148 | Canola | cytosol | 62.23 | 78.52 |
| CDY04474 | Canola | cytosol | 62.23 | 78.52 |
| Solyc01g008950.2.1 | Tomato | nucleus | 62.23 | 78.52 |
| PGSC0003DMT400070437 | Potato | cytosol | 62.23 | 78.52 |
| GSMUA_Achr5P07820_001 | Banana | cytosol | 62.23 | 78.52 |
| CDY55678 | Canola | cytosol | 62.23 | 78.52 |
| CDY56411 | Canola | cytosol | 62.23 | 78.52 |
| PGSC0003DMT400058435 | Potato | cytosol | 62.23 | 78.52 |
| CDY65072 | Canola | cytosol | 62.23 | 78.52 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane | 62.23 | 78.52 |
| KRG94975 | Soybean | nucleus | 62.23 | 78.52 |
| PGSC0003DMT400018569 | Potato | cytosol | 62.23 | 78.52 |
| Bra020155.1-P | Field mustard | cytosol | 62.23 | 78.52 |
| Bra019453.1-P | Field mustard | cytosol | 62.23 | 78.52 |
| Bra014671.1-P | Field mustard | cytosol | 62.23 | 78.52 |
| Bra012037.1-P | Field mustard | cytosol | 62.23 | 78.52 |
| VIT_08s0040g00470.t01 | Wine grape | cytosol | 62.23 | 78.52 |
| Bra006595.1-P | Field mustard | cytosol | 62.23 | 78.52 |
| GSMUA_Achr6P15990_001 | Banana | cytosol | 62.23 | 78.52 |
| Bra004166.1-P | Field mustard | cytosol | 62.23 | 78.52 |
| Solyc12g099990.1.1 | Tomato | nucleus | 62.23 | 78.52 |
| Bra003251.1-P | Field mustard | cytosol | 62.23 | 78.52 |
| AT3G56800.1 | Thale cress | cytosol | 62.23 | 78.52 |
| Bra002368.1-P | Field mustard | cytosol | 62.23 | 78.52 |
| Bra000214.1-P | Field mustard | cytosol | 62.23 | 78.52 |
| Solyc11g072240.1.1 | Tomato | cytosol | 62.23 | 78.52 |
| CDX92401 | Canola | cytosol | 55.85 | 78.36 |
| Bra025438.1-P | Field mustard | cytosol | 46.81 | 77.88 |
| AT5G21274.1 | Thale cress | cytosol | 61.7 | 77.85 |
| GSMUA_Achr3P25040_001 | Banana | cytosol | 61.7 | 77.85 |
| Bra007269.1-P | Field mustard | cytosol | 61.7 | 77.85 |
| GSMUA_Achr2P01120_001 | Banana | cytosol | 61.7 | 77.85 |
| GSMUA_Achr11P... | Banana | cytosol | 42.02 | 77.45 |
| CDY27651 | Canola | cytosol | 61.7 | 77.33 |
| GSMUA_Achr10P... | Banana | cytosol | 61.17 | 77.18 |
| CDX99690 | Canola | cytosol | 61.17 | 77.18 |
| VIT_06s0009g01910.t01 | Wine grape | cytosol | 62.77 | 77.12 |
| PGSC0003DMT400054299 | Potato | cytosol | 46.28 | 76.99 |
| GSMUA_Achr5P27590_001 | Banana | cytosol | 47.34 | 76.72 |
| CDY12321 | Canola | cytosol | 59.04 | 76.55 |
| Bra034981.1-P | Field mustard | cytosol | 59.04 | 76.55 |
| PGSC0003DMT400046278 | Potato | cytosol | 30.32 | 74.03 |
| AT1G66410.2 | Thale cress | cytosol | 62.23 | 73.58 |
| AT2G41110.2 | Thale cress | cytosol | 62.23 | 72.67 |
| KRH18664 | Soybean | cytosol | 53.19 | 71.43 |
| CDY48191 | Canola | cytosol | 65.43 | 68.72 |
| Bra034317.1-P | Field mustard | cytosol | 65.43 | 68.72 |
| AT2G27030.3 | Thale cress | cytosol | 65.96 | 68.51 |
| CDX77060 | Canola | cytosol | 65.43 | 68.33 |
| PGSC0003DMT400014123 | Potato | mitochondrion | 43.62 | 67.21 |
| AT5G37780.3 | Thale cress | cytosol | 62.23 | 66.86 |
| GSMUA_Achr4P22570_001 | Banana | cytosol | 51.06 | 64.86 |
| GSMUA_Achr7P01390_001 | Banana | cytosol | 50.53 | 64.19 |
| CDX75970 | Canola | cytosol | 38.83 | 64.04 |
| GSMUA_Achr2P12680_001 | Banana | cytosol | 50.0 | 63.51 |
| GSMUA_Achr1P04700_001 | Banana | cytosol | 49.47 | 62.84 |
| GSMUA_Achr1P27230_001 | Banana | cytosol | 49.47 | 62.84 |
| GSMUA_Achr5P09010_001 | Banana | cytosol | 48.94 | 62.16 |
| PGSC0003DMT400097662 | Potato | cytosol, mitochondrion | 55.85 | 60.69 |
| GSMUA_Achr6P24410_001 | Banana | cytosol | 47.87 | 60.4 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.81 | 59.86 |
| KRG89812 | Soybean | cytosol, mitochondrion | 52.13 | 59.39 |
| GSMUA_Achr7P07720_001 | Banana | cytosol | 45.74 | 58.11 |
| CDY30947 | Canola | cytosol | 64.36 | 57.89 |
| AT3G43810.2 | Thale cress | cytosol | 64.89 | 57.01 |
| CDY57144 | Canola | cytosol | 42.55 | 54.79 |
| CDY21220 | Canola | cytosol | 63.83 | 54.3 |
| GSMUA_Achr3P25390_001 | Banana | cytosol | 45.21 | 46.45 |
| AT2G41090.1 | Thale cress | cytosol | 46.28 | 45.55 |
| GSMUA_Achr3P26750_001 | Banana | cytosol, plasma membrane | 32.45 | 41.22 |
| GSMUA_Achr6P10140_001 | Banana | cytosol | 34.57 | 39.88 |
| GSMUA_Achr1P14070_001 | Banana | cytosol | 46.81 | 38.94 |
| GSMUA_Achr9P21860_001 | Banana | cytosol, mitochondrion | 30.85 | 35.58 |
| GSMUA_Achr8P29750_001 | Banana | cytosol, mitochondrion | 29.26 | 33.54 |
| GSMUA_Achr1P25220_001 | Banana | cytosol | 28.72 | 33.13 |
| GSMUA_Achr8P05790_001 | Banana | cytosol | 31.38 | 24.08 |
| AT2G41100.1 | Thale cress | cytosol | 41.49 | 24.07 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P10070_001 | EnsemblPlants:GSMUA_Achr10T10070_001 | EnsemblPlantsGene:GSMUA_Achr10G10070_001 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF230 | PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI000295EF5D | UniProt:M0RGY3 | MapMan:35.1 | : | : | : |
Description
Calmodulin-related protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G10070_001]
Coordinates
chr10:-:19694264..19698515
Molecular Weight (calculated)
21014.5 Da
IEP (calculated)
4.455
GRAVY (calculated)
-0.738
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MADLLAPEQI AEFKEAFSLF DKDGNGHITT KELGNVMRTL GQNPTEAELQ DMINEVDADR SGTIDFKEFL NLMAHKMNAG SEEELKEAFR VFDKDQNGFI
101: SAVELRNVLV NLGEKLTDEE INEMMHEADT NNDGQIDYKE FIKVMNAKRR PGEGSDSKKA ETSPRHSKHS GDDPPSKCSQ VCSNCTVL
101: SAVELRNVLV NLGEKLTDEE INEMMHEADT NNDGQIDYKE FIKVMNAKRR PGEGSDSKKA ETSPRHSKHS GDDPPSKCSQ VCSNCTVL
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
Arabidopsis Description
CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.