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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plasma membrane 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr5P27420_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G50360.1 GSMUA_AchrUn_... AT2G39340.1 19843313
AT3G50360.1 GSMUA_Achr5P27420_001 AT3G06290.1 19843313
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G173900.1 Wheat cytosol, mitochondrion 73.01 70.83
TraesCS2B01G192400.1 Wheat cytosol, mitochondrion 73.01 70.83
TraesCS2A01G166500.1 Wheat cytosol, mitochondrion 73.01 70.83
HORVU2Hr1G030640.1 Barley cytosol 72.39 69.82
AT3G50360.1 Thale cress cytosol 69.33 66.86
Zm00001d022160_P003 Maize cytosol, mitochondrion 68.71 65.12
VIT_05s0094g01240.t01 Wine grape cytosol 65.64 64.85
Solyc02g090810.2.1 Tomato cytosol, mitochondrion 66.26 64.29
PGSC0003DMT400010295 Potato cytosol, mitochondrion 66.26 64.29
Solyc04g026350.2.1 Tomato cytosol 67.48 63.58
CDX83123 Canola golgi 71.17 60.73
KRH10567 Soybean endoplasmic reticulum 63.19 60.59
KXG36700 Sorghum cytosol 63.19 59.88
AT4G37010.2 Thale cress cytosol, mitochondrion 61.96 59.06
CDY62753 Canola cytosol 71.78 58.5
Zm00001d014271_P001 Maize cytosol 63.8 58.1
TraesCS7B01G412100.1 Wheat cytosol 64.42 58.01
CDX75623 Canola extracellular 63.8 57.78
HORVU7Hr1G113200.1 Barley cytosol 63.8 57.46
Os10t0389000-01 Rice plasma membrane 66.26 56.54
KRH43884 Soybean cytosol 44.79 55.73
Os07t0618800-01 Rice plasma membrane 70.55 55.02
VIT_07s0031g00700.t01 Wine grape cytosol 67.48 54.46
KRG98826 Soybean cytosol 51.53 53.5
KRG98823 Soybean cytosol 51.53 53.5
GSMUA_Achr3P25040_001 Banana cytosol 41.1 44.97
GSMUA_Achr2P01120_001 Banana cytosol 41.1 44.97
GSMUA_Achr6P23670_001 Banana cytosol 40.49 44.3
GSMUA_Achr10P... Banana cytosol 40.49 44.3
GSMUA_Achr10P... Banana cytosol, plasma membrane 40.49 44.3
GSMUA_Achr5P07820_001 Banana cytosol 40.49 44.3
GSMUA_Achr3P09330_001 Banana cytosol 40.49 44.3
GSMUA_Achr5P27590_001 Banana cytosol 31.29 43.97
GSMUA_Achr6P15990_001 Banana cytosol 39.88 43.62
GSMUA_Achr9P17280_001 Banana cytosol 39.88 43.62
GSMUA_Achr11P... Banana cytosol 26.99 43.14
GSMUA_Achr1P04700_001 Banana cytosol 37.42 41.22
GSMUA_Achr2P12680_001 Banana cytosol 37.42 41.22
GSMUA_Achr1P27230_001 Banana cytosol 36.81 40.54
GSMUA_Achr7P01390_001 Banana cytosol 36.81 40.54
GSMUA_Achr5P09010_001 Banana cytosol 36.81 40.54
GSMUA_Achr4P22570_001 Banana cytosol 36.81 40.54
GSMUA_Achr6P24410_001 Banana cytosol 36.2 39.6
GSMUA_AchrUn_... Banana cytosol 35.58 39.46
GSMUA_Achr7P07720_001 Banana cytosol 33.74 37.16
GSMUA_Achr10P... Banana cytosol 39.88 34.57
GSMUA_Achr10P... Banana cytosol 37.42 32.28
GSMUA_Achr3P25390_001 Banana cytosol 35.58 31.69
GSMUA_Achr1P25220_001 Banana cytosol 29.45 29.45
GSMUA_Achr3P26750_001 Banana cytosol, plasma membrane 26.38 29.05
GSMUA_Achr9P21860_001 Banana cytosol, mitochondrion 28.83 28.83
GSMUA_Achr8P29750_001 Banana cytosol, mitochondrion 26.38 26.22
GSMUA_Achr1P14070_001 Banana cytosol 36.2 26.11
GSMUA_Achr8P05790_001 Banana cytosol 19.63 13.06
Protein Annotations
EnsemblPlants:GSMUA_Achr6P10140_001EnsemblPlants:GSMUA_Achr6T10140_001EnsemblPlantsGene:GSMUA_Achr6G10140_001Gene3D:1.10.238.10GO:GO:0003674GO:GO:0005488
GO:GO:0005509InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domInterPro:IPR002048PANTHER:PTHR23050
PANTHER:PTHR23050:SF167PFAM:PF13499PFscan:PS50222ScanProsite:PS00018SMART:SM00054SUPFAM:SSF47473
UniParc:UPI000294E39FUniProt:M0T5R3MapMan:14.6.1.1MapMan:16.11.2.3::
Description
Probable calcium-binding protein CML13 [Source:GMGC_GENE;Acc:GSMUA_Achr6G10140_001]
Coordinates
chr6:-:6784720..6787252
Molecular Weight (calculated)
18926.2 Da
IEP (calculated)
4.512
GRAVY (calculated)
-0.868
Length
163 amino acids
Sequence
(BLAST)
001: MGSRREKPRS RHHGLNQQKR QEIKEVFDLF DTDQSGSLDA KELNVAMRAL GFEMTEEDIN RLMTEIDKDR NGAIDFEEFL HMMTAKIGER DSKEELTRAF
101: RILDQDNNGR ISDVDIQRVA NDLGEKFTLS EIREMIEAAD LNGDGEVDAE EFMRIMKRTS YGY
Best Arabidopsis Sequence Match ( AT3G50360.1 )
(BLAST)
001: MSSIYRTVSR KEKPRRHHGL TTQKKQEIKE AFELFDTDGS GTIDAKELNV AMRALGFEMT EEQINKMIAD VDKDGSGAID FDEFVHMMTA KIGERDTKEE
101: LTKAFQIIDL DKNGKISPDD IKRMAKDLGE NFTDAEIREM VEEADRDRDG EVNMDEFMRM MRRTAYGGN
Arabidopsis Description
CML20Probable calcium-binding protein CML20 [Source:UniProtKB/Swiss-Prot;Acc:O82659]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.